RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 LINC00846Q9NV44 126 aa6.01□□□□□ -1.45
RNF4-216ENST00000511859 TMEM256-PLSCR3K7ERE1 68 aa6□□□□□ -1.45
RNF4-216ENST00000511859 IGFL1Q6UW32 110 aa5.99□□□□□ -1.45
RNF4-216ENST00000511859 H3BQ85 93 aa5.98□□□□□ -1.45
RNF4-216ENST00000511859 C1orf195Q5TG92 126 aa5.98□□□□□ -1.45
RNF4-216ENST00000511859 K7EP34 96 aa5.97□□□□□ -1.45
RNF4-216ENST00000511859 ANKRD29Q8N6D5 301 aa5.97□□□□□ -1.45
RNF4-216ENST00000511859 UBE2V1Q13404 147 aa5.96□□□□□ -1.45
RNF4-216ENST00000511859 Q6JHZ5 121 aa5.95□□□□□ -1.46
RNF4-216ENST00000511859 KRTAP4-7Q9BYR0 210 aa5.95□□□□□ -1.46
RNF4-216ENST00000511859 ATP11AUNQ6ZP68 121 aa5.94□□□□□ -1.46
RNF4-216ENST00000511859 MT2AP02795 61 aa5.93□□□□□ -1.46
RNF4-216ENST00000511859 KRTAP6-3Q3LI67 103 aa5.93□□□□□ -1.46
RNF4-216ENST00000511859 GTF2H5Q6ZYL4 71 aa5.93□□□□□ -1.46
RNF4-216ENST00000511859 H3BT86 120 aa5.93□□□□□ -1.46
RNF4-216ENST00000511859 RBM3P98179 157 aaKnown RBP5.93□□□□□ -1.46
RNF4-216ENST00000511859 LCE1DQ5T752 114 aa5.93□□□□□ -1.46
RNF4-216ENST00000511859 KRTAP9-3Q9BYQ3 159 aa5.93□□□□□ -1.46
RNF4-216ENST00000511859 A0A1B0GV90 55 aa5.92□□□□□ -1.46
RNF4-216ENST00000511859 VPS25Q9BRG1 176 aa5.92□□□□□ -1.46
RNF4-216ENST00000511859 A0A1W2PNM2 257 aa5.91□□□□□ -1.46
RNF4-216ENST00000511859 DSCR8Q96T75 97 aa5.91□□□□□ -1.46
RNF4-216ENST00000511859 C14orf132Q9NPU4 83 aa5.91□□□□□ -1.46
RNF4-216ENST00000511859 PRO0461Q9UI25 63 aa5.91□□□□□ -1.46
RNF4-216ENST00000511859 TRBV7-7A0A0K0K1E9 115 aa5.9□□□□□ -1.47
RNF4-216ENST00000511859 CCKP06307 115 aa5.9□□□□□ -1.47
RNF4-216ENST00000511859 NEBP20929 6669 aa5.89□□□□□ -1.47
RNF4-216ENST00000511859 TRBV7-4A0A0J9YYF1 115 aa5.89□□□□□ -1.47
RNF4-216ENST00000511859 JMJD7-PLA2G4BH0Y9G9 81 aa5.89□□□□□ -1.47
RNF4-216ENST00000511859 KRTAP19-6Q3LI70 58 aa5.89□□□□□ -1.47
RNF4-216ENST00000511859 Q75L30 129 aa5.89□□□□□ -1.47
RNF4-216ENST00000511859 TEN1Q86WV5 123 aa5.89□□□□□ -1.47
RNF4-216ENST00000511859 MT1FP04733 61 aa5.88□□□□□ -1.47
RNF4-216ENST00000511859 KRTAP10-10P60014 251 aa5.88□□□□□ -1.47
RNF4-216ENST00000511859 A0A087WSZ3 146 aa5.87□□□□□ -1.47
RNF4-216ENST00000511859 Q6ZQT0 140 aa5.86□□□□□ -1.47
RNF4-216ENST00000511859 OBSCN-AS1Q96MR7 158 aa5.86□□□□□ -1.47
RNF4-216ENST00000511859 F8W1H4 67 aa5.84□□□□□ -1.47
RNF4-216ENST00000511859 LOC110117498A0A087WWA1 95 aa5.83□□□□□ -1.48
RNF4-216ENST00000511859 ETDBQ3ZM63 59 aa5.82□□□□□ -1.48
RNF4-216ENST00000511859 SS18L2Q9UHA2 77 aa5.82□□□□□ -1.48
RNF4-216ENST00000511859 PDE6GP18545 87 aa5.8□□□□□ -1.48
RNF4-216ENST00000511859 DEFB116Q30KQ4 102 aa5.8□□□□□ -1.48
RNF4-216ENST00000511859 Q96NJ1 140 aa5.79□□□□□ -1.48
RNF4-216ENST00000511859 C20orf166-AS1Q96NR2 134 aa5.77□□□□□ -1.49
RNF4-216ENST00000511859 KRTAP4-9Q9BYQ8 210 aa5.77□□□□□ -1.49
RNF4-216ENST00000511859 FAM236DA0A1B0GTK5 79 aa5.76□□□□□ -1.49
RNF4-216ENST00000511859 FAM236CP0DP71 79 aa5.76□□□□□ -1.49
RNF4-216ENST00000511859 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
RNF4-216ENST00000511859 IGKV4-1P06312 121 aa5.75□□□□□ -1.49
RNF4-216ENST00000511859 LINC00472Q9H8W2 130 aa5.74□□□□□ -1.49
RNF4-216ENST00000511859 NREPQ16612 68 aa5.73□□□□□ -1.49
RNF4-216ENST00000511859 MUC12Q9UKN1 5478 aa5.73□□□□□ -1.49
RNF4-216ENST00000511859 A0A1B0GW54 56 aa5.72□□□□□ -1.49
RNF4-216ENST00000511859 A8MUU9 505 aa5.71□□□□□ -1.5
RNF4-216ENST00000511859 KRTAP20-1Q3LI63 56 aa5.7□□□□□ -1.5
RNF4-216ENST00000511859 KRTAP4-2Q9BYR5 136 aa5.7□□□□□ -1.5
RNF4-216ENST00000511859 RBM12B-AS1Q9P1G2 102 aa5.7□□□□□ -1.5
RNF4-216ENST00000511859 IGHV6-1A0A0B4J1U7 121 aa5.68□□□□□ -1.5
RNF4-216ENST00000511859 DSCR10P59022 87 aa5.68□□□□□ -1.5
RNF4-216ENST00000511859 Q6ZVQ6 151 aa5.68□□□□□ -1.5
RNF4-216ENST00000511859 J3KT08 172 aa5.67□□□□□ -1.5
RNF4-216ENST00000511859 MPLKIPQ8TAP9 179 aa5.67□□□□□ -1.5
RNF4-216ENST00000511859 A0A1B0GVX0 72 aa5.66□□□□□ -1.5
RNF4-216ENST00000511859 NOTCH2NLQ7Z3S9 236 aa5.66□□□□□ -1.5
RNF4-216ENST00000511859 UBL5Q9BZL1 73 aa5.66□□□□□ -1.5
RNF4-216ENST00000511859 BPY2O14599 106 aa5.65□□□□□ -1.51
RNF4-216ENST00000511859 NDUFB1O75438 58 aa5.64□□□□□ -1.51
RNF4-216ENST00000511859 LINC00313P59037 77 aa5.64□□□□□ -1.51
RNF4-216ENST00000511859 IGKV3D-7A0A0C4DH55 119 aa5.63□□□□□ -1.51
RNF4-216ENST00000511859 A8MWP4 228 aa5.63□□□□□ -1.51
RNF4-216ENST00000511859 Q8N9L7 120 aa5.63□□□□□ -1.51
RNF4-216ENST00000511859 KRTAP16-1A8MUX0 517 aa5.62□□□□□ -1.51
RNF4-216ENST00000511859 K7EQZ3 153 aa5.62□□□□□ -1.51
RNF4-216ENST00000511859 HRES1P13985 223 aa5.62□□□□□ -1.51
RNF4-216ENST00000511859 ACYP1P07311 99 aa5.61□□□□□ -1.51
RNF4-216ENST00000511859 H3BS24 57 aa5.6□□□□□ -1.51
RNF4-216ENST00000511859 PRR15Q8IV56 129 aa5.6□□□□□ -1.51
RNF4-216ENST00000511859 FAM240AA0A1B0GVK7 77 aa5.59□□□□□ -1.51
RNF4-216ENST00000511859 C8orf17Q9NRJ1 99 aa5.59□□□□□ -1.51
RNF4-216ENST00000511859 C8orf87E5RJ46 101 aa5.58□□□□□ -1.52
RNF4-216ENST00000511859 J3QR89 54 aa5.57□□□□□ -1.52
RNF4-216ENST00000511859 MMP24-AS1A0A0U1RRL7 71 aa5.55□□□□□ -1.52
RNF4-216ENST00000511859 WFDC13Q8IUB5 93 aa5.55□□□□□ -1.52
RNF4-216ENST00000511859 Q8N9P0 234 aaPredicted RBP5.55□□□□□ -1.52
RNF4-216ENST00000511859 CXCL6P80162 114 aa5.54□□□□□ -1.52
RNF4-216ENST00000511859 KRTAP4-11Q9BYQ6 195 aa5.54□□□□□ -1.52
RNF4-216ENST00000511859 hDV103S1A0JD37 113 aa5.53□□□□□ -1.52
RNF4-216ENST00000511859 K7ERU9 68 aa5.51□□□□□ -1.53
RNF4-216ENST00000511859 CASC2Q6XLA1 102 aa5.51□□□□□ -1.53
RNF4-216ENST00000511859 LINC00643Q86TS7 51 aa5.51□□□□□ -1.53
RNF4-216ENST00000511859 TMEM254Q8TBM7 123 aa5.51□□□□□ -1.53
RNF4-216ENST00000511859 NDUFS5O43920 106 aa5.5□□□□□ -1.53
RNF4-216ENST00000511859 HIST1H4AP62805 103 aaKnown RBP5.5□□□□□ -1.53
RNF4-216ENST00000511859 LCE4AQ5TA78 99 aa5.5□□□□□ -1.53
RNF4-216ENST00000511859 MRPL34Q9BQ48 92 aaKnown RBP5.5□□□□□ -1.53
RNF4-216ENST00000511859 MDN1Q9NU22 5596 aa5.49□□□□□ -1.53
RNF4-216ENST00000511859 HCG22E2RYF7 251 aa5.49□□□□□ -1.53
RNF4-216ENST00000511859 ATP5EP2Q5VTU8 51 aa5.49□□□□□ -1.53
RNF4-216ENST00000511859 A0A087WVE0 104 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms