RNA–Protein interactions for RNA: ENST00000511175.1

SUB1-208, Transcript of SUB1 homolog, transcriptional regulator, humanhuman

TSL 2

Gene SUB1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUB1-208ENST00000511175 LRP1BQ9NZR2 4599 aa0.06□□□□□ -2.4
SUB1-208ENST00000511175 M0R1W7 72 aa0.06□□□□□ -2.4
SUB1-208ENST00000511175 ABRACLQ9P1F3 81 aa0.06□□□□□ -2.4
SUB1-208ENST00000511175 GCN1Q92616 2671 aaKnown RBP0.06□□□□□ -2.4
SUB1-208ENST00000511175 HTTP42858 3142 aa0.06□□□□□ -2.4
SUB1-208ENST00000511175 PKD1P98161 4303 aa0.06□□□□□ -2.4
SUB1-208ENST00000511175 FASNP49327 2511 aaKnown RBP0.06□□□□□ -2.4
SUB1-208ENST00000511175 DMXL1Q9Y485 3027 aa0.05□□□□□ -2.4
SUB1-208ENST00000511175 SONP18583 2426 aaKnown RBP0.05□□□□□ -2.4
SUB1-208ENST00000511175 SRRM2Q9UQ35 2752 aaKnown RBP0.05□□□□□ -2.4
SUB1-208ENST00000511175 H0YGX0 51 aa0.05□□□□□ -2.4
SUB1-208ENST00000511175 RPS27P42677 84 aaKnown RBP0.05□□□□□ -2.4
SUB1-208ENST00000511175 RPS27LQ71UM5 84 aaKnown RBP0.05□□□□□ -2.4
SUB1-208ENST00000511175 PKHD1P08F94 4074 aa0.04□□□□□ -2.4
SUB1-208ENST00000511175 ABCA10Q8WWZ4 1543 aa0.04□□□□□ -2.4
SUB1-208ENST00000511175 ITSN2Q9NZM3 1697 aa0.04□□□□□ -2.4
SUB1-208ENST00000511175 TIAM1Q13009 1591 aa0.03□□□□□ -2.4
SUB1-208ENST00000511175 KALRNO60229 2985 aa0.03□□□□□ -2.4
SUB1-208ENST00000511175 AKAP9Q99996 3911 aa0.03□□□□□ -2.41
SUB1-208ENST00000511175 ANKHD1Q8IWZ3 2542 aaKnown RBP0.03□□□□□ -2.41
SUB1-208ENST00000511175 CLASP1Q7Z460 1538 aa0.03□□□□□ -2.41
SUB1-208ENST00000511175 TEP1Q99973 2627 aaKnown RBP0.02□□□□□ -2.41
SUB1-208ENST00000511175 FAM186AA6NE01 2351 aa0.02□□□□□ -2.41
SUB1-208ENST00000511175 IGIPA6NJ69 53 aa0.02□□□□□ -2.41
SUB1-208ENST00000511175 VPS13BQ7Z7G8 4022 aa0.02□□□□□ -2.41
SUB1-208ENST00000511175 EEA1Q15075 1411 aa0.02□□□□□ -2.41
SUB1-208ENST00000511175 CPS1P31327 1500 aa0.02□□□□□ -2.41
SUB1-208ENST00000511175 ACACAQ13085 2346 aa0.02□□□□□ -2.41
SUB1-208ENST00000511175 FLGP20930 4061 aaPredicted RBP0.02□□□□□ -2.41
SUB1-208ENST00000511175 LY75O60449 1722 aa0.01□□□□□ -2.41
SUB1-208ENST00000511175 RIF1Q5UIP0 2472 aaKnown RBP0.01□□□□□ -2.41
SUB1-208ENST00000511175 IGLV5-48A0A075B6I7 105 aa0.01□□□□□ -2.41
SUB1-208ENST00000511175 MMP24-AS1A0A0U1RRL7 71 aa0.01□□□□□ -2.41
SUB1-208ENST00000511175 SVEP1Q4LDE5 3571 aa0.01□□□□□ -2.41
SUB1-208ENST00000511175 CUBNO60494 3623 aa0□□□□□ -2.41
SUB1-208ENST00000511175 NBPF19A0A087WUL8 3843 aa0□□□□□ -2.41
SUB1-208ENST00000511175 SMIM27A0A1W2PRY6 76 aa0□□□□□ -2.41
SUB1-208ENST00000511175 SPRR2EP22531 72 aa0□□□□□ -2.41
SUB1-208ENST00000511175 PLNP26678 52 aa0□□□□□ -2.41
SUB1-208ENST00000511175 KIF1AQ12756 1690 aa0□□□□□ -2.41
SUB1-208ENST00000511175 NBEAL2Q6ZNJ1 2754 aa0□□□□□ -2.41
SUB1-208ENST00000511175 LINC00308Q8TCZ7 52 aa0□□□□□ -2.41
SUB1-208ENST00000511175 ALS2Q96Q42 1657 aa0□□□□□ -2.41
SUB1-208ENST00000511175 MGAM2Q2M2H8 2515 aa-0.01□□□□□ -2.41
SUB1-208ENST00000511175 WDR87Q6ZQQ6 2873 aa-0.01□□□□□ -2.41
SUB1-208ENST00000511175 MT1AP04731 61 aa-0.01□□□□□ -2.41
SUB1-208ENST00000511175 KRTAP6-2Q3LI66 62 aa-0.01□□□□□ -2.41
SUB1-208ENST00000511175 DNAH9Q9NYC9 4486 aa-0.01□□□□□ -2.41
SUB1-208ENST00000511175 FAT3Q8TDW7 4589 aa-0.02□□□□□ -2.41
SUB1-208ENST00000511175 PRXQ9BXM0 1461 aa-0.02□□□□□ -2.41
SUB1-208ENST00000511175 MAST1Q9Y2H9 1570 aa-0.02□□□□□ -2.41
SUB1-208ENST00000511175 MYO18BQ8IUG5 2567 aa-0.02□□□□□ -2.41
SUB1-208ENST00000511175 ITPR3Q14573 2671 aa-0.03□□□□□ -2.41
SUB1-208ENST00000511175 TOGARAM1Q9Y4F4 1720 aa-0.03□□□□□ -2.41
SUB1-208ENST00000511175 TNP1P09430 55 aa-0.03□□□□□ -2.41
SUB1-208ENST00000511175 DEFB110Q30KQ9 67 aa-0.03□□□□□ -2.41
SUB1-208ENST00000511175 DNAH3Q8TD57 4116 aa-0.04□□□□□ -2.42
SUB1-208ENST00000511175 A8MTW9 85 aa-0.04□□□□□ -2.42
SUB1-208ENST00000511175 KRTAP6-1Q3LI64 71 aa-0.04□□□□□ -2.42
SUB1-208ENST00000511175 CMC2Q9NRP2 79 aa-0.04□□□□□ -2.42
SUB1-208ENST00000511175 UGGT1Q9NYU2 1555 aa-0.04□□□□□ -2.42
SUB1-208ENST00000511175 ANKRD36CQ5JPF3 1778 aa-0.04□□□□□ -2.42
SUB1-208ENST00000511175 CROCC2H7BZ55 1655 aa-0.05□□□□□ -2.42
SUB1-208ENST00000511175 CCDC168Q8NDH2 2452 aa-0.05□□□□□ -2.42
SUB1-208ENST00000511175 LAMA5O15230 3695 aa-0.05□□□□□ -2.42
SUB1-208ENST00000511175 LAMA1P25391 3075 aa-0.05□□□□□ -2.42
SUB1-208ENST00000511175 M0QY20 66 aa-0.05□□□□□ -2.42
SUB1-208ENST00000511175 APOBP04114 4563 aaKnown RBP-0.06□□□□□ -2.42
SUB1-208ENST00000511175 M0QZ58 72 aa-0.06□□□□□ -2.42
SUB1-208ENST00000511175 SPRR2FQ96RM1 72 aa-0.06□□□□□ -2.42
SUB1-208ENST00000511175 ADCY10Q96PN6 1610 aa-0.06□□□□□ -2.42
SUB1-208ENST00000511175 SACSQ9NZJ4 4579 aa-0.06□□□□□ -2.42
SUB1-208ENST00000511175 MUC2Q02817 5179 aa-0.07□□□□□ -2.42
SUB1-208ENST00000511175 CDC42BPAQ5VT25 1732 aa-0.07□□□□□ -2.42
SUB1-208ENST00000511175 ACACBO00763 2458 aa-0.07□□□□□ -2.42
SUB1-208ENST00000511175 USP9XQ93008 2570 aaPredicted RBP-0.07□□□□□ -2.42
SUB1-208ENST00000511175 ANK3Q12955 4377 aaKnown RBP-0.07□□□□□ -2.42
SUB1-208ENST00000511175 KAAG1Q9UBP8 84 aa-0.07□□□□□ -2.42
SUB1-208ENST00000511175 DNAH6Q9C0G6 4158 aa-0.08□□□□□ -2.42
SUB1-208ENST00000511175 ITPR1Q14643 2758 aa-0.08□□□□□ -2.42
SUB1-208ENST00000511175 PREX2Q70Z35 1606 aa-0.08□□□□□ -2.42
SUB1-208ENST00000511175 KRTAP19-7Q3SYF9 63 aa-0.08□□□□□ -2.42
SUB1-208ENST00000511175 A0A0C4DFX4 3053 aa-0.08□□□□□ -2.42
SUB1-208ENST00000511175 NEBP20929 6669 aa-0.08□□□□□ -2.42
SUB1-208ENST00000511175 DEFB131AP59861 70 aa-0.09□□□□□ -2.42
SUB1-208ENST00000511175 CLPSL2Q6UWE3 100 aa-0.09□□□□□ -2.42
SUB1-208ENST00000511175 WFDC10BQ8IUB3 73 aa-0.09□□□□□ -2.42
SUB1-208ENST00000511175 FRYQ5TBA9 3013 aa-0.09□□□□□ -2.42
SUB1-208ENST00000511175 TLN2Q9Y4G6 2542 aa-0.1□□□□□ -2.42
SUB1-208ENST00000511175 USP9YO00507 2555 aaPredicted RBP-0.1□□□□□ -2.43
SUB1-208ENST00000511175 COL12A1Q99715 3063 aa-0.1□□□□□ -2.43
SUB1-208ENST00000511175 PKHD1L1Q86WI1 4243 aa-0.1□□□□□ -2.43
SUB1-208ENST00000511175 EFCAB6Q5THR3 1501 aa-0.1□□□□□ -2.43
SUB1-208ENST00000511175 SYCP2Q9BX26 1530 aa-0.1□□□□□ -2.43
SUB1-208ENST00000511175 RANBP2P49792 3224 aaKnown RBP-0.11□□□□□ -2.43
SUB1-208ENST00000511175 VPS13DQ5THJ4 4388 aa-0.11□□□□□ -2.43
SUB1-208ENST00000511175 AGLP35573 1532 aa-0.11□□□□□ -2.43
SUB1-208ENST00000511175 SNRPGP15A8MWD9 76 aa-0.11□□□□□ -2.43
SUB1-208ENST00000511175 SMIM2Q9BVW6 85 aa-0.11□□□□□ -2.43
SUB1-208ENST00000511175 DNAH1Q9P2D7 4330 aa-0.11□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms