RNA–Protein interactions for RNA: ENST00000511171.5

LEMD2-209, Transcript of LEM domain containing 2, humanhuman

TSL 2

Gene LEMD2, Length 4,870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD2-209ENST00000511171 C9orf92A6NGG3 77 aa7.69□□□□□ -1.18
LEMD2-209ENST00000511171 ZFHX3Q15911 3703 aa7.68□□□□□ -1.18
LEMD2-209ENST00000511171 FAM229BQ4G0N7 80 aa7.68□□□□□ -1.18
LEMD2-209ENST00000511171 RBM12B-AS1Q9P1G2 102 aa7.68□□□□□ -1.18
LEMD2-209ENST00000511171 LINC01558Q9Y6Z2 57 aa7.66□□□□□ -1.18
LEMD2-209ENST00000511171 PRR26Q8N8Z3 221 aa7.65□□□□□ -1.19
LEMD2-209ENST00000511171 KRTAP10-1P60331 282 aa7.64□□□□□ -1.19
LEMD2-209ENST00000511171 Q8N9P0 234 aaPredicted RBP7.64□□□□□ -1.19
LEMD2-209ENST00000511171 LINC00483Q53H64 154 aa7.62□□□□□ -1.19
LEMD2-209ENST00000511171 VPS13CQ709C8 3753 aa7.61□□□□□ -1.19
LEMD2-209ENST00000511171 H3BS24 57 aa7.6□□□□□ -1.19
LEMD2-209ENST00000511171 Q5VV11 94 aa7.6□□□□□ -1.19
LEMD2-209ENST00000511171 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
LEMD2-209ENST00000511171 ANK3Q12955 4377 aaKnown RBP7.58□□□□□ -1.2
LEMD2-209ENST00000511171 ASB16-AS1Q495Z4 193 aa7.57□□□□□ -1.2
LEMD2-209ENST00000511171 KRTAP29-1A8MX34 341 aaPredicted RBP7.56□□□□□ -1.2
LEMD2-209ENST00000511171 PKD1L1Q8TDX9 2849 aa7.55□□□□□ -1.2
LEMD2-209ENST00000511171 ZCCHC13Q8WW36 166 aaKnown RBP7.54□□□□□ -1.2
LEMD2-209ENST00000511171 Q8N1X5 172 aa7.54□□□□□ -1.2
LEMD2-209ENST00000511171 LINC01554Q52M75 96 aa7.53□□□□□ -1.2
LEMD2-209ENST00000511171 HRES1P13985 223 aa7.53□□□□□ -1.2
LEMD2-209ENST00000511171 KRTAP13-1Q8IUC0 172 aa7.52□□□□□ -1.2
LEMD2-209ENST00000511171 A0A087X002 238 aa7.52□□□□□ -1.21
LEMD2-209ENST00000511171 TRRAPQ9Y4A5 3859 aa7.51□□□□□ -1.21
LEMD2-209ENST00000511171 LCE6AA0A183 80 aa7.48□□□□□ -1.21
LEMD2-209ENST00000511171 NOTCH2NLQ7Z3S9 236 aa7.48□□□□□ -1.21
LEMD2-209ENST00000511171 Q5W150 140 aa7.47□□□□□ -1.21
LEMD2-209ENST00000511171 J3QL48 77 aa7.47□□□□□ -1.21
LEMD2-209ENST00000511171 TGP01266 2768 aa7.43□□□□□ -1.22
LEMD2-209ENST00000511171 TENM2Q9NT68 2774 aa7.43□□□□□ -1.22
LEMD2-209ENST00000511171 DMBT1Q9UGM3 2413 aaPredicted RBP7.42□□□□□ -1.22
LEMD2-209ENST00000511171 ZNF469Q96JG9 3925 aaPredicted RBP7.4□□□□□ -1.22
LEMD2-209ENST00000511171 FLG2Q5D862 2391 aaPredicted RBP7.38□□□□□ -1.23
LEMD2-209ENST00000511171 A0A1B0GU33 70 aa7.38□□□□□ -1.23
LEMD2-209ENST00000511171 KRTAP13-2Q52LG2 175 aa7.36□□□□□ -1.23
LEMD2-209ENST00000511171 SPINK7P58062 85 aa7.36□□□□□ -1.23
LEMD2-209ENST00000511171 COX6B2Q6YFQ2 88 aa7.34□□□□□ -1.24
LEMD2-209ENST00000511171 LUZP6Q538Z0 58 aa7.33□□□□□ -1.24
LEMD2-209ENST00000511171 DMAC1Q96GE9 116 aa7.33□□□□□ -1.24
LEMD2-209ENST00000511171 PRAC1Q96KF2 57 aa7.33□□□□□ -1.24
LEMD2-209ENST00000511171 A6NN06 94 aa7.31□□□□□ -1.24
LEMD2-209ENST00000511171 Q5VSD8 79 aa7.3□□□□□ -1.24
LEMD2-209ENST00000511171 A0A0D9SG42 100 aa7.27□□□□□ -1.25
LEMD2-209ENST00000511171 KRTAP21-3Q3LHN1 58 aa7.23□□□□□ -1.25
LEMD2-209ENST00000511171 Q6ZSA8 131 aa7.22□□□□□ -1.25
LEMD2-209ENST00000511171 CSAG1Q6PB30 78 aa7.22□□□□□ -1.25
LEMD2-209ENST00000511171 SPATA8Q6RVD6 105 aa7.21□□□□□ -1.26
LEMD2-209ENST00000511171 AKAP9Q99996 3911 aa7.17□□□□□ -1.26
LEMD2-209ENST00000511171 S4R3F8 94 aa7.15□□□□□ -1.26
LEMD2-209ENST00000511171 KRTAP1-4P0C5Y4 121 aa7.15□□□□□ -1.27
LEMD2-209ENST00000511171 RPS29P62273 56 aaKnown RBP7.15□□□□□ -1.27
LEMD2-209ENST00000511171 A0A0A0MQY5 61 aa7.13□□□□□ -1.27
LEMD2-209ENST00000511171 SRRM2Q9UQ35 2752 aaKnown RBP7.09□□□□□ -1.27
LEMD2-209ENST00000511171 CAMK2N1Q7Z7J9 78 aa7.09□□□□□ -1.27
LEMD2-209ENST00000511171 RPL37P61927 97 aaKnown RBP7.09□□□□□ -1.27
LEMD2-209ENST00000511171 FBN3Q75N90 2809 aa7.08□□□□□ -1.28
LEMD2-209ENST00000511171 H1FX-AS1Q4G0G2 97 aa7.07□□□□□ -1.28
LEMD2-209ENST00000511171 ROMO1P60602 79 aa7.06□□□□□ -1.28
LEMD2-209ENST00000511171 MEGF8Q7Z7M0 2845 aa7.04□□□□□ -1.28
LEMD2-209ENST00000511171 A8MU10 97 aa7.02□□□□□ -1.28
LEMD2-209ENST00000511171 SEC61BP60468 96 aaKnown RBP6.99□□□□□ -1.29
LEMD2-209ENST00000511171 KRTAP25-1Q3LHN0 102 aa6.98□□□□□ -1.29
LEMD2-209ENST00000511171 R4GN34 69 aa6.97□□□□□ -1.29
LEMD2-209ENST00000511171 HUWE1Q7Z6Z7 4374 aaKnown RBP6.97□□□□□ -1.29
LEMD2-209ENST00000511171 A8MUU9 505 aa6.95□□□□□ -1.3
LEMD2-209ENST00000511171 C20orf166-AS1Q96NR2 134 aa6.94□□□□□ -1.3
LEMD2-209ENST00000511171 KRTAP16-1A8MUX0 517 aa6.94□□□□□ -1.3
LEMD2-209ENST00000511171 COL7A1Q02388 2944 aa6.87□□□□□ -1.31
LEMD2-209ENST00000511171 CSMD3Q7Z407 3707 aa6.86□□□□□ -1.31
LEMD2-209ENST00000511171 M0R2T5 61 aa6.85□□□□□ -1.31
LEMD2-209ENST00000511171 KRTAP13-3Q3SY46 172 aa6.84□□□□□ -1.32
LEMD2-209ENST00000511171 M0QZ58 72 aa6.83□□□□□ -1.32
LEMD2-209ENST00000511171 A0A1B0GVY2 172 aa6.83□□□□□ -1.32
LEMD2-209ENST00000511171 ADM2Q7Z4H4 148 aa6.83□□□□□ -1.32
LEMD2-209ENST00000511171 XP32Q5T750 250 aa6.77□□□□□ -1.33
LEMD2-209ENST00000511171 DNAH9Q9NYC9 4486 aa6.75□□□□□ -1.33
LEMD2-209ENST00000511171 NDUFAF8A1L188 74 aa6.69□□□□□ -1.34
LEMD2-209ENST00000511171 KRTAP10-8P60410 259 aa6.66□□□□□ -1.34
LEMD2-209ENST00000511171 PLECQ15149 4684 aaKnown RBP6.66□□□□□ -1.34
LEMD2-209ENST00000511171 PLAC4Q8WY50 150 aa6.65□□□□□ -1.34
LEMD2-209ENST00000511171 DNAH10Q8IVF4 4471 aa6.61□□□□□ -1.35
LEMD2-209ENST00000511171 H0YAA0 97 aa6.59□□□□□ -1.35
LEMD2-209ENST00000511171 TPRXLQ17RH7 258 aa6.58□□□□□ -1.36
LEMD2-209ENST00000511171 DNAH1Q9P2D7 4330 aa6.54□□□□□ -1.36
LEMD2-209ENST00000511171 DNHD1Q96M86 4753 aa6.52□□□□□ -1.37
LEMD2-209ENST00000511171 STARD9Q9P2P6 4700 aa6.49□□□□□ -1.37
LEMD2-209ENST00000511171 KRTAP3-1Q9BYR8 98 aa6.48□□□□□ -1.37
LEMD2-209ENST00000511171 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
LEMD2-209ENST00000511171 DNAH11Q96DT5 4516 aa6.47□□□□□ -1.37
LEMD2-209ENST00000511171 ANK2Q01484 3957 aa6.47□□□□□ -1.37
LEMD2-209ENST00000511171 VPS13DQ5THJ4 4388 aa6.46□□□□□ -1.37
LEMD2-209ENST00000511171 P0C880 135 aa6.46□□□□□ -1.38
LEMD2-209ENST00000511171 TNP1P09430 55 aa6.43□□□□□ -1.38
LEMD2-209ENST00000511171 KRTAP10-4P60372 401 aaPredicted RBP6.43□□□□□ -1.38
LEMD2-209ENST00000511171 PRKDCP78527 4128 aaKnown RBP6.43□□□□□ -1.38
LEMD2-209ENST00000511171 DNAH5Q8TE73 4624 aa6.41□□□□□ -1.38
LEMD2-209ENST00000511171 DNAH17Q9UFH2 4485 aa6.38□□□□□ -1.39
LEMD2-209ENST00000511171 ALMS1Q8TCU4 4167 aa6.37□□□□□ -1.39
LEMD2-209ENST00000511171 DNAH3Q8TD57 4116 aa6.37□□□□□ -1.39
LEMD2-209ENST00000511171 CMYA5Q8N3K9 4069 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 97 ms