RNA–Protein interactions for RNA: ENST00000511153.5

PROM1-211, Transcript of prominin 1, humanhuman

TSL 1 (best)

Gene PROM1, Length 1,595 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-211ENST00000511153 PPDPFLQ8WWR9 84 aa3.06□□□□□ -1.92
PROM1-211ENST00000511153 LRP2P98164 4655 aa3.05□□□□□ -1.92
PROM1-211ENST00000511153 IGLV8-61A0A075B6I0 122 aa3.05□□□□□ -1.92
PROM1-211ENST00000511153 TRBV7-7A0A0K0K1E9 115 aa3.05□□□□□ -1.92
PROM1-211ENST00000511153 SPINK1P00995 79 aa3.05□□□□□ -1.92
PROM1-211ENST00000511153 Q6JHZ5 121 aa3.05□□□□□ -1.92
PROM1-211ENST00000511153 SPAG11AQ6PDA7 123 aa3.05□□□□□ -1.92
PROM1-211ENST00000511153 C9orf92A6NGG3 77 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 GTF2H5Q6ZYL4 71 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 DSCR8Q96T75 97 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 PRO0461Q9UI25 63 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 RNF213Q63HN8 5207 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 IGLV7-46A0A075B6I9 117 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 H3BT86 120 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 K7ERU9 68 aa3.04□□□□□ -1.92
PROM1-211ENST00000511153 TRBV7-4A0A0J9YYF1 115 aa3.03□□□□□ -1.92
PROM1-211ENST00000511153 H3BQ85 93 aa3.03□□□□□ -1.92
PROM1-211ENST00000511153 ETDBQ3ZM63 59 aa3.03□□□□□ -1.92
PROM1-211ENST00000511153 C1orf195Q5TG92 126 aa3.03□□□□□ -1.92
PROM1-211ENST00000511153 TEN1Q86WV5 123 aa3.03□□□□□ -1.92
PROM1-211ENST00000511153 LIMD2Q9BT23 127 aa3.03□□□□□ -1.92
PROM1-211ENST00000511153 CD164Q04900 197 aa3.02□□□□□ -1.93
PROM1-211ENST00000511153 Q6ZQT0 140 aa3.02□□□□□ -1.93
PROM1-211ENST00000511153 JMJD7-PLA2G4BH0Y9G9 81 aa3.01□□□□□ -1.93
PROM1-211ENST00000511153 IGKV2-30P06310 120 aa3.01□□□□□ -1.93
PROM1-211ENST00000511153 SIGMAR1Q99720 223 aa3.01□□□□□ -1.93
PROM1-211ENST00000511153 OBSCN-AS1Q96MR7 158 aa3□□□□□ -1.93
PROM1-211ENST00000511153 LOC110117498A0A087WWA1 95 aa3□□□□□ -1.93
PROM1-211ENST00000511153 IGKV4-1P06312 121 aa3□□□□□ -1.93
PROM1-211ENST00000511153 F8W1H4 67 aa2.99□□□□□ -1.93
PROM1-211ENST00000511153 DSCR10P59022 87 aa2.99□□□□□ -1.93
PROM1-211ENST00000511153 Q6Q795 121 aa2.99□□□□□ -1.93
PROM1-211ENST00000511153 Q96NJ1 140 aa2.99□□□□□ -1.93
PROM1-211ENST00000511153 MUC2Q02817 5179 aa2.99□□□□□ -1.93
PROM1-211ENST00000511153 RPS29P62273 56 aaKnown RBP2.98□□□□□ -1.93
PROM1-211ENST00000511153 SCGB1A1P11684 91 aa2.97□□□□□ -1.93
PROM1-211ENST00000511153 KRTAP13-3Q3SY46 172 aa2.97□□□□□ -1.93
PROM1-211ENST00000511153 FP248Q71RG6 208 aaPredicted RBP2.97□□□□□ -1.93
PROM1-211ENST00000511153 NOTCH2NLQ7Z3S9 236 aa2.97□□□□□ -1.93
PROM1-211ENST00000511153 Q8N9P0 234 aaPredicted RBP2.97□□□□□ -1.93
PROM1-211ENST00000511153 SS18L2Q9UHA2 77 aa2.97□□□□□ -1.93
PROM1-211ENST00000511153 IGHV6-1A0A0B4J1U7 121 aa2.96□□□□□ -1.94
PROM1-211ENST00000511153 NREPQ16612 68 aa2.96□□□□□ -1.94
PROM1-211ENST00000511153 Q5XG85 94 aa2.96□□□□□ -1.94
PROM1-211ENST00000511153 LINC00846Q9NV44 126 aa2.96□□□□□ -1.94
PROM1-211ENST00000511153 J3QR89 54 aa2.95□□□□□ -1.94
PROM1-211ENST00000511153 PDE6GP18545 87 aa2.95□□□□□ -1.94
PROM1-211ENST00000511153 Q8N9L7 120 aa2.95□□□□□ -1.94
PROM1-211ENST00000511153 LINC00472Q9H8W2 130 aa2.95□□□□□ -1.94
PROM1-211ENST00000511153 ASB16-AS1Q495Z4 193 aa2.95□□□□□ -1.94
PROM1-211ENST00000511153 SMIM20Q8N5G0 67 aa2.95□□□□□ -1.94
PROM1-211ENST00000511153 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
PROM1-211ENST00000511153 BPY2O14599 106 aa2.94□□□□□ -1.94
PROM1-211ENST00000511153 TPRXLQ17RH7 258 aa2.94□□□□□ -1.94
PROM1-211ENST00000511153 IGKV3D-7A0A0C4DH55 119 aa2.93□□□□□ -1.94
PROM1-211ENST00000511153 K7EQZ3 153 aa2.92□□□□□ -1.94
PROM1-211ENST00000511153 PCOTHQ58A44 107 aa2.92□□□□□ -1.94
PROM1-211ENST00000511153 PRAC1Q96KF2 57 aa2.92□□□□□ -1.94
PROM1-211ENST00000511153 A0A1B0GVX0 72 aa2.91□□□□□ -1.94
PROM1-211ENST00000511153 LINC00313P59037 77 aa2.91□□□□□ -1.94
PROM1-211ENST00000511153 C4orf26Q17RF5 130 aa2.91□□□□□ -1.94
PROM1-211ENST00000511153 WFDC13Q8IUB5 93 aa2.91□□□□□ -1.94
PROM1-211ENST00000511153 UBL5Q9BZL1 73 aa2.91□□□□□ -1.94
PROM1-211ENST00000511153 A8MWP4 228 aa2.91□□□□□ -1.94
PROM1-211ENST00000511153 PRO0628Q9UI54 55 aa2.91□□□□□ -1.94
PROM1-211ENST00000511153 FSIP2Q5CZC0 6907 aa2.9□□□□□ -1.94
PROM1-211ENST00000511153 FAT4Q6V0I7 4981 aa2.9□□□□□ -1.95
PROM1-211ENST00000511153 KRTAP16-1A8MUX0 517 aa2.9□□□□□ -1.95
PROM1-211ENST00000511153 J3KT08 172 aa2.9□□□□□ -1.95
PROM1-211ENST00000511153 NDUFB1O75438 58 aa2.9□□□□□ -1.95
PROM1-211ENST00000511153 KRTAP4-1Q9BYQ7 146 aa2.9□□□□□ -1.95
PROM1-211ENST00000511153 C8orf17Q9NRJ1 99 aa2.9□□□□□ -1.95
PROM1-211ENST00000511153 PRR15Q8IV56 129 aa2.89□□□□□ -1.95
PROM1-211ENST00000511153 MMP24-AS1A0A0U1RRL7 71 aa2.88□□□□□ -1.95
PROM1-211ENST00000511153 FAM240AA0A1B0GVK7 77 aa2.88□□□□□ -1.95
PROM1-211ENST00000511153 NDUFS5O43920 106 aa2.88□□□□□ -1.95
PROM1-211ENST00000511153 RPL37P61927 97 aaKnown RBP2.88□□□□□ -1.95
PROM1-211ENST00000511153 IGKV2D-30A0A075B6S6 120 aa2.87□□□□□ -1.95
PROM1-211ENST00000511153 A0A1B0GW54 56 aa2.87□□□□□ -1.95
PROM1-211ENST00000511153 LCE1AQ5T7P2 110 aa2.87□□□□□ -1.95
PROM1-211ENST00000511153 C8orf87E5RJ46 101 aa2.87□□□□□ -1.95
PROM1-211ENST00000511153 MT-ATP8P03928 68 aa2.87□□□□□ -1.95
PROM1-211ENST00000511153 HIST1H4AP62805 103 aaKnown RBP2.87□□□□□ -1.95
PROM1-211ENST00000511153 A0A087WVE0 104 aa2.86□□□□□ -1.95
PROM1-211ENST00000511153 hDV103S1A0JD37 113 aa2.86□□□□□ -1.95
PROM1-211ENST00000511153 ATP11AUNQ6ZP68 121 aa2.86□□□□□ -1.95
PROM1-211ENST00000511153 CRCT1Q9UGL9 99 aa2.86□□□□□ -1.95
PROM1-211ENST00000511153 A8MUU9 505 aa2.85□□□□□ -1.95
PROM1-211ENST00000511153 ACYP1P07311 99 aa2.85□□□□□ -1.95
PROM1-211ENST00000511153 CASC2Q6XLA1 102 aa2.85□□□□□ -1.95
PROM1-211ENST00000511153 C20orf166-AS1Q96NR2 134 aa2.85□□□□□ -1.95
PROM1-211ENST00000511153 HCG22E2RYF7 251 aa2.84□□□□□ -1.95
PROM1-211ENST00000511153 MRPL34Q9BQ48 92 aaKnown RBP2.84□□□□□ -1.95
PROM1-211ENST00000511153 CXCL6P80162 114 aa2.83□□□□□ -1.96
PROM1-211ENST00000511153 LINC00643Q86TS7 51 aa2.83□□□□□ -1.96
PROM1-211ENST00000511153 TMEM254Q8TBM7 123 aa2.83□□□□□ -1.96
PROM1-211ENST00000511153 ANAPC13Q9BS18 74 aa2.83□□□□□ -1.96
PROM1-211ENST00000511153 Q5W150 140 aa2.82□□□□□ -1.96
PROM1-211ENST00000511153 ZCCHC13Q8WW36 166 aaKnown RBP2.82□□□□□ -1.96
PROM1-211ENST00000511153 OCR1Q9BZK8 76 aa2.82□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms