RNA–Protein interactions for RNA: ENST00000510737.1

USP53-206, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 5

Gene USP53, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-206ENST00000510737 FAM236BA0A1B0GV22 79 aa2.4□□□□□ -2.03
USP53-206ENST00000510737 H0Y8G0 127 aa2.4□□□□□ -2.03
USP53-206ENST00000510737 OCIAD2Q56VL3 154 aa2.4□□□□□ -2.03
USP53-206ENST00000510737 TRBV7-6A0A0J9YX20 115 aa2.39□□□□□ -2.03
USP53-206ENST00000510737 F8WEM9 126 aa2.39□□□□□ -2.03
USP53-206ENST00000510737 NMUP48645 174 aa2.39□□□□□ -2.03
USP53-206ENST00000510737 PMCHL1Q16048 86 aa2.39□□□□□ -2.03
USP53-206ENST00000510737 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
USP53-206ENST00000510737 MT1XP80297 61 aa2.38□□□□□ -2.03
USP53-206ENST00000510737 ZCCHC13Q8WW36 166 aaKnown RBP2.38□□□□□ -2.03
USP53-206ENST00000510737 SPANXDQ9BXN6 97 aa2.38□□□□□ -2.03
USP53-206ENST00000510737 SMCO4Q9NRQ5 59 aa2.38□□□□□ -2.03
USP53-206ENST00000510737 ZNF815PA8K554 130 aa2.37□□□□□ -2.03
USP53-206ENST00000510737 LEPROTO15243 131 aa2.37□□□□□ -2.03
USP53-206ENST00000510737 IFITM2Q01629 132 aa2.37□□□□□ -2.03
USP53-206ENST00000510737 SPANXCQ9NY87 97 aa2.37□□□□□ -2.03
USP53-206ENST00000510737 TRAV13-2A0A0B4J235 113 aa2.36□□□□□ -2.03
USP53-206ENST00000510737 MUC5ACP98088 5654 aa2.36□□□□□ -2.03
USP53-206ENST00000510737 TRAV12-1A0A0B4J245 112 aa2.35□□□□□ -2.03
USP53-206ENST00000510737 J3QQQ9 107 aa2.35□□□□□ -2.03
USP53-206ENST00000510737 LINC00614P0C842 121 aa2.35□□□□□ -2.03
USP53-206ENST00000510737 SLC7A5P1Q8MH63 180 aa2.35□□□□□ -2.03
USP53-206ENST00000510737 LINC00308Q8TCZ7 52 aa2.35□□□□□ -2.03
USP53-206ENST00000510737 SS18L2Q9UHA2 77 aa2.35□□□□□ -2.03
USP53-206ENST00000510737 H3BUT2 72 aa2.34□□□□□ -2.03
USP53-206ENST00000510737 A0A087WSZ3 146 aa2.33□□□□□ -2.04
USP53-206ENST00000510737 PEA15Q15121 130 aa2.33□□□□□ -2.04
USP53-206ENST00000510737 SIGMAR1Q99720 223 aa2.33□□□□□ -2.04
USP53-206ENST00000510737 PRO2289Q9P1D8 64 aa2.33□□□□□ -2.04
USP53-206ENST00000510737 MT-ND4LP03901 98 aa2.32□□□□□ -2.04
USP53-206ENST00000510737 KLKP1Q107X0 134 aa2.32□□□□□ -2.04
USP53-206ENST00000510737 NHP2Q9NX24 153 aaKnown RBP2.32□□□□□ -2.04
USP53-206ENST00000510737 Q6ZQY7 126 aa2.31□□□□□ -2.04
USP53-206ENST00000510737 TEN1Q86WV5 123 aa2.31□□□□□ -2.04
USP53-206ENST00000510737 IFI27L1Q96BM0 104 aa2.31□□□□□ -2.04
USP53-206ENST00000510737 IGHV6-1A0A0B4J1U7 121 aa2.3□□□□□ -2.04
USP53-206ENST00000510737 FABP9Q0Z7S8 132 aa2.3□□□□□ -2.04
USP53-206ENST00000510737 C18orf32Q8TCD1 76 aa2.3□□□□□ -2.04
USP53-206ENST00000510737 RBM3P98179 157 aaKnown RBP2.29□□□□□ -2.04
USP53-206ENST00000510737 RGS21Q2M5E4 152 aa2.29□□□□□ -2.04
USP53-206ENST00000510737 LINC00575Q6W349 94 aa2.29□□□□□ -2.04
USP53-206ENST00000510737 A6NDN8 102 aa2.28□□□□□ -2.04
USP53-206ENST00000510737 C3orf79P0CE67 100 aa2.28□□□□□ -2.04
USP53-206ENST00000510737 TCTE3Q8IZS6 198 aa2.28□□□□□ -2.04
USP53-206ENST00000510737 SMIM11BQ8TCY0 68 aa2.28□□□□□ -2.04
USP53-206ENST00000510737 SNHG12Q9BXW3 62 aa2.28□□□□□ -2.04
USP53-206ENST00000510737 hADV29S1A0JD25 119 aa2.27□□□□□ -2.05
USP53-206ENST00000510737 SEC11CQ9BY50 192 aa2.27□□□□□ -2.05
USP53-206ENST00000510737 LINC00472Q9H8W2 130 aa2.26□□□□□ -2.05
USP53-206ENST00000510737 TIMM17BO60830 172 aa2.25□□□□□ -2.05
USP53-206ENST00000510737 LCA10Q71F78 164 aa2.25□□□□□ -2.05
USP53-206ENST00000510737 IGKV3D-7A0A0C4DH55 119 aa2.24□□□□□ -2.05
USP53-206ENST00000510737 C8orf87E5RJ46 101 aa2.24□□□□□ -2.05
USP53-206ENST00000510737 COX19Q49B96 90 aa2.24□□□□□ -2.05
USP53-206ENST00000510737 CSAG1Q6PB30 78 aa2.24□□□□□ -2.05
USP53-206ENST00000510737 PMCHL2Q9BQD1 86 aa2.24□□□□□ -2.05
USP53-206ENST00000510737 CRIPTQ9P021 101 aa2.24□□□□□ -2.05
USP53-206ENST00000510737 A0A1B0GVX0 72 aa2.23□□□□□ -2.05
USP53-206ENST00000510737 PLNP26678 52 aa2.23□□□□□ -2.05
USP53-206ENST00000510737 VAMP3Q15836 100 aa2.23□□□□□ -2.05
USP53-206ENST00000510737 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.23□□□□□ -2.05
USP53-206ENST00000510737 PRR15Q8IV56 129 aa2.23□□□□□ -2.05
USP53-206ENST00000510737 PPDPFLQ8WWR9 84 aa2.23□□□□□ -2.05
USP53-206ENST00000510737 DPM2O94777 84 aa2.22□□□□□ -2.05
USP53-206ENST00000510737 LYRM7Q5U5X0 104 aa2.22□□□□□ -2.05
USP53-206ENST00000510737 RAB37Q96AX2 223 aa2.22□□□□□ -2.05
USP53-206ENST00000510737 HSPB8Q9UJY1 196 aa2.22□□□□□ -2.05
USP53-206ENST00000510737 IGKCP01834 107 aa2.21□□□□□ -2.06
USP53-206ENST00000510737 TTTY13Q9BZ97 58 aa2.21□□□□□ -2.06
USP53-206ENST00000510737 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
USP53-206ENST00000510737 KRTAP19-3Q7Z4W3 81 aa2.2□□□□□ -2.06
USP53-206ENST00000510737 CHCHD1Q96BP2 118 aaKnown RBP2.2□□□□□ -2.06
USP53-206ENST00000510737 TRAPPC1Q9Y5R8 145 aa2.2□□□□□ -2.06
USP53-206ENST00000510737 H3BMG7 143 aa2.19□□□□□ -2.06
USP53-206ENST00000510737 C4orf26Q17RF5 130 aa2.19□□□□□ -2.06
USP53-206ENST00000510737 MUSTN1Q8IVN3 82 aa2.19□□□□□ -2.06
USP53-206ENST00000510737 PLAC4Q8WY50 150 aa2.19□□□□□ -2.06
USP53-206ENST00000510737 DSCR8Q96T75 97 aa2.19□□□□□ -2.06
USP53-206ENST00000510737 S100PP25815 95 aa2.18□□□□□ -2.06
USP53-206ENST00000510737 CYSTM1Q9H1C7 97 aa2.18□□□□□ -2.06
USP53-206ENST00000510737 S4R3F8 94 aa2.18□□□□□ -2.06
USP53-206ENST00000510737 TRBV7-4A0A0J9YYF1 115 aa2.17□□□□□ -2.06
USP53-206ENST00000510737 LEPROTL1O95214 131 aa2.16□□□□□ -2.06
USP53-206ENST00000510737 IFITM1P13164 125 aa2.16□□□□□ -2.06
USP53-206ENST00000510737 HSBP1O75506 76 aa2.15□□□□□ -2.07
USP53-206ENST00000510737 KRTAP20-2Q3LI61 65 aa2.15□□□□□ -2.07
USP53-206ENST00000510737 KRTAP19-7Q3SYF9 63 aa2.15□□□□□ -2.07
USP53-206ENST00000510737 TRGC2P03986 189 aa2.14□□□□□ -2.07
USP53-206ENST00000510737 FABP4P15090 132 aa2.14□□□□□ -2.07
USP53-206ENST00000510737 C12orf57Q99622 126 aa2.14□□□□□ -2.07
USP53-206ENST00000510737 BPY2O14599 106 aa2.13□□□□□ -2.07
USP53-206ENST00000510737 MT1EP04732 61 aa2.13□□□□□ -2.07
USP53-206ENST00000510737 C2orf91Q6ZV80 131 aa2.13□□□□□ -2.07
USP53-206ENST00000510737 ANKRD29Q8N6D5 301 aa2.13□□□□□ -2.07
USP53-206ENST00000510737 COPS9Q8WXC6 57 aa2.13□□□□□ -2.07
USP53-206ENST00000510737 C8orf17Q9NRJ1 99 aa2.13□□□□□ -2.07
USP53-206ENST00000510737 A8MUN3 132 aa2.12□□□□□ -2.07
USP53-206ENST00000510737 H0YAA0 97 aa2.11□□□□□ -2.07
USP53-206ENST00000510737 PDE6GP18545 87 aa2.11□□□□□ -2.07
USP53-206ENST00000510737 SCGB1D4Q6XE38 83 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms