RNA–Protein interactions for RNA: ENST00000510557.5

LIN54-209, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 2 BASIC

Gene LIN54, Length 2,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-209ENST00000510557 SRRM2Q9UQ35 2752 aaKnown RBP11.48□□□□□ -0.57
LIN54-209ENST00000510557 RTL8CO15255 209 aa11.47□□□□□ -0.57
LIN54-209ENST00000510557 CDK2AP2O75956 126 aa11.47□□□□□ -0.57
LIN54-209ENST00000510557 DNAH7Q8WXX0 4024 aa11.47□□□□□ -0.57
LIN54-209ENST00000510557 WWC2-AS2Q96NR7 200 aa11.46□□□□□ -0.57
LIN54-209ENST00000510557 PSORS1C2Q9UIG4 136 aa11.46□□□□□ -0.57
LIN54-209ENST00000510557 PLECQ15149 4684 aaKnown RBP11.46□□□□□ -0.57
LIN54-209ENST00000510557 IGHV6-1A0A0B4J1U7 121 aa11.46□□□□□ -0.58
LIN54-209ENST00000510557 A0A1B0GVX0 72 aa11.46□□□□□ -0.58
LIN54-209ENST00000510557 ZNF861PO60384 105 aa11.45□□□□□ -0.58
LIN54-209ENST00000510557 MRPL34Q9BQ48 92 aaKnown RBP11.45□□□□□ -0.58
LIN54-209ENST00000510557 PRR26Q8N8Z3 221 aa11.44□□□□□ -0.58
LIN54-209ENST00000510557 CSMD3Q7Z407 3707 aa11.44□□□□□ -0.58
LIN54-209ENST00000510557 PRAC1Q96KF2 57 aa11.43□□□□□ -0.58
LIN54-209ENST00000510557 C4orf48Q5BLP8 95 aa11.4□□□□□ -0.58
LIN54-209ENST00000510557 PLA2G1BP04054 148 aaKnown RBP11.38□□□□□ -0.59
LIN54-209ENST00000510557 ACYP2P14621 99 aa11.35□□□□□ -0.59
LIN54-209ENST00000510557 VPS13DQ5THJ4 4388 aa11.34□□□□□ -0.59
LIN54-209ENST00000510557 ADM2Q7Z4H4 148 aa11.33□□□□□ -0.6
LIN54-209ENST00000510557 LINC01554Q52M75 96 aa11.32□□□□□ -0.6
LIN54-209ENST00000510557 ANAPC11Q9NYG5 84 aa11.32□□□□□ -0.6
LIN54-209ENST00000510557 C1orf134Q5TEV5 83 aa11.3□□□□□ -0.6
LIN54-209ENST00000510557 A0A087X002 238 aa11.29□□□□□ -0.6
LIN54-209ENST00000510557 IGLV7-43P04211 117 aa11.29□□□□□ -0.6
LIN54-209ENST00000510557 NOTCH2NLQ7Z3S9 236 aa11.29□□□□□ -0.6
LIN54-209ENST00000510557 ALMS1Q8TCU4 4167 aa11.28□□□□□ -0.6
LIN54-209ENST00000510557 A0A1B0GU69 56 aa11.26□□□□□ -0.61
LIN54-209ENST00000510557 Q5W150 140 aa11.26□□□□□ -0.61
LIN54-209ENST00000510557 KRTAP13-3Q3SY46 172 aa11.25□□□□□ -0.61
LIN54-209ENST00000510557 SPATA8Q6RVD6 105 aa11.25□□□□□ -0.61
LIN54-209ENST00000510557 STARD9Q9P2P6 4700 aa11.25□□□□□ -0.61
LIN54-209ENST00000510557 SSBP3-AS1Q7Z2R9 100 aa11.24□□□□□ -0.61
LIN54-209ENST00000510557 DMAC1Q96GE9 116 aa11.23□□□□□ -0.61
LIN54-209ENST00000510557 HECTD4Q9Y4D8 3996 aa11.22□□□□□ -0.61
LIN54-209ENST00000510557 CIRBP-AS1Q8TBR5 109 aa11.21□□□□□ -0.62
LIN54-209ENST00000510557 SPINK6Q6UWN8 80 aa11.2□□□□□ -0.62
LIN54-209ENST00000510557 PRKDCP78527 4128 aaKnown RBP11.2□□□□□ -0.62
LIN54-209ENST00000510557 DNAH8Q96JB1 4490 aa11.2□□□□□ -0.62
LIN54-209ENST00000510557 DNAH17Q9UFH2 4485 aa11.2□□□□□ -0.62
LIN54-209ENST00000510557 MIR22HGQ0VDD5 57 aa11.16□□□□□ -0.62
LIN54-209ENST00000510557 UQCR11O14957 56 aa11.14□□□□□ -0.63
LIN54-209ENST00000510557 DNAH2Q9P225 4427 aa11.14□□□□□ -0.63
LIN54-209ENST00000510557 H3BS24 57 aa11.11□□□□□ -0.63
LIN54-209ENST00000510557 LY6G6CO95867 125 aa11.11□□□□□ -0.63
LIN54-209ENST00000510557 FRAS1Q86XX4 4008 aa11.1□□□□□ -0.63
LIN54-209ENST00000510557 KMT2AQ03164 3969 aa11.07□□□□□ -0.64
LIN54-209ENST00000510557 RETNLBQ9BQ08 111 aa11.05□□□□□ -0.64
LIN54-209ENST00000510557 CSAG1Q6PB30 78 aa11.04□□□□□ -0.64
LIN54-209ENST00000510557 FAM229AH3BQW9 127 aa11.02□□□□□ -0.64
LIN54-209ENST00000510557 FBN3Q75N90 2809 aa11.01□□□□□ -0.65
LIN54-209ENST00000510557 KRTAP10-2P60368 255 aa11□□□□□ -0.65
LIN54-209ENST00000510557 IGKV2-30P06310 120 aa10.99□□□□□ -0.65
LIN54-209ENST00000510557 MEGF8Q7Z7M0 2845 aa10.97□□□□□ -0.65
LIN54-209ENST00000510557 Q6ZSA8 131 aa10.96□□□□□ -0.65
LIN54-209ENST00000510557 KRTAP13-2Q52LG2 175 aa10.96□□□□□ -0.66
LIN54-209ENST00000510557 TGP01266 2768 aa10.92□□□□□ -0.66
LIN54-209ENST00000510557 DNAH11Q96DT5 4516 aa10.89□□□□□ -0.67
LIN54-209ENST00000510557 DNAH6Q9C0G6 4158 aa10.89□□□□□ -0.67
LIN54-209ENST00000510557 KRTAP10-1P60331 282 aa10.88□□□□□ -0.67
LIN54-209ENST00000510557 DNAH5Q8TE73 4624 aa10.87□□□□□ -0.67
LIN54-209ENST00000510557 KRTAP16-1A8MUX0 517 aa10.85□□□□□ -0.67
LIN54-209ENST00000510557 KRTAP1-4P0C5Y4 121 aa10.83□□□□□ -0.68
LIN54-209ENST00000510557 IGKV2D-30A0A075B6S6 120 aa10.79□□□□□ -0.68
LIN54-209ENST00000510557 SPINK1P00995 79 aa10.78□□□□□ -0.68
LIN54-209ENST00000510557 TYMSOSQ8TAI1 123 aa10.76□□□□□ -0.69
LIN54-209ENST00000510557 LRP1BQ9NZR2 4599 aa10.72□□□□□ -0.69
LIN54-209ENST00000510557 PKD1P98161 4303 aa10.7□□□□□ -0.7
LIN54-209ENST00000510557 RPS29P62273 56 aaKnown RBP10.68□□□□□ -0.7
LIN54-209ENST00000510557 KRTAP25-1Q3LHN0 102 aa10.68□□□□□ -0.7
LIN54-209ENST00000510557 A8MUU9 505 aa10.67□□□□□ -0.7
LIN54-209ENST00000510557 FAT2Q9NYQ8 4349 aa10.64□□□□□ -0.71
LIN54-209ENST00000510557 DNHD1Q96M86 4753 aa10.63□□□□□ -0.71
LIN54-209ENST00000510557 LINC00304Q8N9R0 145 aa10.61□□□□□ -0.71
LIN54-209ENST00000510557 H0YAA0 97 aa10.6□□□□□ -0.71
LIN54-209ENST00000510557 ROMO1P60602 79 aa10.59□□□□□ -0.71
LIN54-209ENST00000510557 VPS13BQ7Z7G8 4022 aa10.57□□□□□ -0.72
LIN54-209ENST00000510557 Q8N1X5 172 aa10.56□□□□□ -0.72
LIN54-209ENST00000510557 HYDINQ4G0P3 5121 aa10.52□□□□□ -0.72
LIN54-209ENST00000510557 A0A1B0GU33 70 aa10.47□□□□□ -0.73
LIN54-209ENST00000510557 H1FX-AS1Q4G0G2 97 aa10.42□□□□□ -0.74
LIN54-209ENST00000510557 C20orf166-AS1Q96NR2 134 aa10.41□□□□□ -0.74
LIN54-209ENST00000510557 SACSQ9NZJ4 4579 aa10.38□□□□□ -0.75
LIN54-209ENST00000510557 KRTAP21-3Q3LHN1 58 aa10.37□□□□□ -0.75
LIN54-209ENST00000510557 SMR3BP02814 79 aaPredicted RBP10.36□□□□□ -0.75
LIN54-209ENST00000510557 K7ERS5 55 aa10.35□□□□□ -0.75
LIN54-209ENST00000510557 C9orf92A6NGG3 77 aa10.33□□□□□ -0.76
LIN54-209ENST00000510557 CRIPTQ9P021 101 aa10.3□□□□□ -0.76
LIN54-209ENST00000510557 A0A1B0GVY2 172 aa10.27□□□□□ -0.77
LIN54-209ENST00000510557 P0C880 135 aa10.27□□□□□ -0.77
LIN54-209ENST00000510557 KRTAP10-4P60372 401 aaPredicted RBP10.26□□□□□ -0.77
LIN54-209ENST00000510557 PKHD1P08F94 4074 aa10.26□□□□□ -0.77
LIN54-209ENST00000510557 KRTAP3-1Q9BYR8 98 aa10.21□□□□□ -0.77
LIN54-209ENST00000510557 DYNC1H1Q14204 4646 aaKnown RBP10.21□□□□□ -0.78
LIN54-209ENST00000510557 FLG2Q5D862 2391 aaPredicted RBP10.2□□□□□ -0.78
LIN54-209ENST00000510557 PKHD1L1Q86WI1 4243 aa10.2□□□□□ -0.78
LIN54-209ENST00000510557 COX6B2Q6YFQ2 88 aa10.17□□□□□ -0.78
LIN54-209ENST00000510557 APOBP04114 4563 aaKnown RBP10.16□□□□□ -0.78
LIN54-209ENST00000510557 FAT1Q14517 4588 aa10.08□□□□□ -0.8
LIN54-209ENST00000510557 SPINT4Q6UDR6 99 aa10.07□□□□□ -0.8
LIN54-209ENST00000510557 RPL37P61927 97 aaKnown RBP10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms