RNA–Protein interactions for RNA: ENST00000510377.5

USP38-202, Transcript of ubiquitin specific peptidase 38, humanhuman

TSL 1 (best) BASIC

Gene USP38, Length 4,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-202ENST00000510377 FAM229AH3BQW9 127 aa8.96□□□□□ -0.97
USP38-202ENST00000510377 TGP01266 2768 aa8.96□□□□□ -0.98
USP38-202ENST00000510377 IGLV7-43P04211 117 aa8.95□□□□□ -0.98
USP38-202ENST00000510377 LCA10Q71F78 164 aa8.95□□□□□ -0.98
USP38-202ENST00000510377 DMBT1Q9UGM3 2413 aaPredicted RBP8.94□□□□□ -0.98
USP38-202ENST00000510377 SMR3BP02814 79 aaPredicted RBP8.94□□□□□ -0.98
USP38-202ENST00000510377 LINC01558Q9Y6Z2 57 aa8.94□□□□□ -0.98
USP38-202ENST00000510377 RBM12B-AS1Q9P1G2 102 aa8.93□□□□□ -0.98
USP38-202ENST00000510377 C8orf87E5RJ46 101 aa8.92□□□□□ -0.98
USP38-202ENST00000510377 ANK3Q12955 4377 aaKnown RBP8.91□□□□□ -0.98
USP38-202ENST00000510377 Q96NJ1 140 aa8.9□□□□□ -0.98
USP38-202ENST00000510377 SSBP3-AS1Q7Z2R9 100 aa8.88□□□□□ -0.99
USP38-202ENST00000510377 PRAC1Q96KF2 57 aa8.87□□□□□ -0.99
USP38-202ENST00000510377 MIR22HGQ0VDD5 57 aa8.86□□□□□ -0.99
USP38-202ENST00000510377 Q5W150 140 aa8.86□□□□□ -0.99
USP38-202ENST00000510377 UQCR11O14957 56 aa8.85□□□□□ -0.99
USP38-202ENST00000510377 AKAP9Q99996 3911 aa8.85□□□□□ -0.99
USP38-202ENST00000510377 TYMSOSQ8TAI1 123 aa8.84□□□□□ -0.99
USP38-202ENST00000510377 PLA2G1BP04054 148 aaKnown RBP8.83□□□□□ -1
USP38-202ENST00000510377 Q6ZR54 194 aa8.83□□□□□ -1
USP38-202ENST00000510377 Q8N1X5 172 aa8.83□□□□□ -1
USP38-202ENST00000510377 PLAC8Q9NZF1 115 aa8.8□□□□□ -1
USP38-202ENST00000510377 LINC00483Q53H64 154 aa8.78□□□□□ -1
USP38-202ENST00000510377 KRTAP13-1Q8IUC0 172 aa8.78□□□□□ -1
USP38-202ENST00000510377 Q6ZRN7 208 aaPredicted RBP8.75□□□□□ -1.01
USP38-202ENST00000510377 K7ERS5 55 aa8.74□□□□□ -1.01
USP38-202ENST00000510377 C9orf92A6NGG3 77 aa8.73□□□□□ -1.01
USP38-202ENST00000510377 KRTAP21-3Q3LHN1 58 aa8.73□□□□□ -1.01
USP38-202ENST00000510377 FLG2Q5D862 2391 aaPredicted RBP8.72□□□□□ -1.01
USP38-202ENST00000510377 A6NN06 94 aa8.69□□□□□ -1.02
USP38-202ENST00000510377 COL7A1Q02388 2944 aa8.69□□□□□ -1.02
USP38-202ENST00000510377 KRTAP10-2P60368 255 aa8.65□□□□□ -1.02
USP38-202ENST00000510377 DMAC1Q96GE9 116 aa8.65□□□□□ -1.02
USP38-202ENST00000510377 CSMD3Q7Z407 3707 aa8.64□□□□□ -1.03
USP38-202ENST00000510377 J3QL48 77 aa8.63□□□□□ -1.03
USP38-202ENST00000510377 ADM2Q7Z4H4 148 aa8.62□□□□□ -1.03
USP38-202ENST00000510377 LINC00304Q8N9R0 145 aa8.62□□□□□ -1.03
USP38-202ENST00000510377 KRTAP10-1P60331 282 aa8.55□□□□□ -1.04
USP38-202ENST00000510377 ASB16-AS1Q495Z4 193 aa8.55□□□□□ -1.04
USP38-202ENST00000510377 FBN3Q75N90 2809 aa8.55□□□□□ -1.04
USP38-202ENST00000510377 CSAG1Q6PB30 78 aa8.54□□□□□ -1.04
USP38-202ENST00000510377 LINC01554Q52M75 96 aa8.54□□□□□ -1.04
USP38-202ENST00000510377 KRTAP13-2Q52LG2 175 aa8.51□□□□□ -1.05
USP38-202ENST00000510377 CRIPTQ9P021 101 aa8.46□□□□□ -1.05
USP38-202ENST00000510377 SPATA8Q6RVD6 105 aa8.45□□□□□ -1.06
USP38-202ENST00000510377 A0A1B0GU33 70 aa8.44□□□□□ -1.06
USP38-202ENST00000510377 A0A0D9SG42 100 aa8.43□□□□□ -1.06
USP38-202ENST00000510377 MEGF8Q7Z7M0 2845 aa8.37□□□□□ -1.07
USP38-202ENST00000510377 Q5VSD8 79 aa8.34□□□□□ -1.07
USP38-202ENST00000510377 KRTAP13-3Q3SY46 172 aa8.31□□□□□ -1.08
USP38-202ENST00000510377 SPINT4Q6UDR6 99 aa8.3□□□□□ -1.08
USP38-202ENST00000510377 H3BS24 57 aa8.28□□□□□ -1.08
USP38-202ENST00000510377 KRTAP16-1A8MUX0 517 aa8.22□□□□□ -1.09
USP38-202ENST00000510377 KRTAP1-4P0C5Y4 121 aa8.22□□□□□ -1.09
USP38-202ENST00000510377 H1FX-AS1Q4G0G2 97 aa8.22□□□□□ -1.09
USP38-202ENST00000510377 HUWE1Q7Z6Z7 4374 aaKnown RBP8.21□□□□□ -1.1
USP38-202ENST00000510377 DNAH10Q8IVF4 4471 aa8.21□□□□□ -1.1
USP38-202ENST00000510377 Q6ZSA8 131 aa8.15□□□□□ -1.1
USP38-202ENST00000510377 COX6B2Q6YFQ2 88 aa8.1□□□□□ -1.11
USP38-202ENST00000510377 H0YAA0 97 aa8.08□□□□□ -1.12
USP38-202ENST00000510377 KRTAP25-1Q3LHN0 102 aa8.07□□□□□ -1.12
USP38-202ENST00000510377 RPL37P61927 97 aaKnown RBP8.04□□□□□ -1.12
USP38-202ENST00000510377 ANK2Q01484 3957 aa8.02□□□□□ -1.13
USP38-202ENST00000510377 ROMO1P60602 79 aa8.01□□□□□ -1.13
USP38-202ENST00000510377 S4R3F8 94 aa8.01□□□□□ -1.13
USP38-202ENST00000510377 A8MUU9 505 aa7.99□□□□□ -1.13
USP38-202ENST00000510377 C20orf166-AS1Q96NR2 134 aa7.96□□□□□ -1.13
USP38-202ENST00000510377 RPS29P62273 56 aaKnown RBP7.95□□□□□ -1.14
USP38-202ENST00000510377 PLECQ15149 4684 aaKnown RBP7.93□□□□□ -1.14
USP38-202ENST00000510377 DNHD1Q96M86 4753 aa7.9□□□□□ -1.14
USP38-202ENST00000510377 DNAH9Q9NYC9 4486 aa7.88□□□□□ -1.15
USP38-202ENST00000510377 LYSTQ99698 3801 aa7.88□□□□□ -1.15
USP38-202ENST00000510377 KRTAP3-1Q9BYR8 98 aa7.83□□□□□ -1.16
USP38-202ENST00000510377 C10orf95Q9H7T3 257 aa7.82□□□□□ -1.16
USP38-202ENST00000510377 DNAH1Q9P2D7 4330 aa7.81□□□□□ -1.16
USP38-202ENST00000510377 M0R2T5 61 aa7.75□□□□□ -1.17
USP38-202ENST00000510377 DNAH11Q96DT5 4516 aa7.75□□□□□ -1.17
USP38-202ENST00000510377 A0A1B0GVY2 172 aa7.73□□□□□ -1.17
USP38-202ENST00000510377 DNAH8Q96JB1 4490 aa7.72□□□□□ -1.17
USP38-202ENST00000510377 SEC61BP60468 96 aaKnown RBP7.72□□□□□ -1.17
USP38-202ENST00000510377 STARD9Q9P2P6 4700 aa7.71□□□□□ -1.17
USP38-202ENST00000510377 R4GN34 69 aa7.71□□□□□ -1.18
USP38-202ENST00000510377 M0QZ58 72 aa7.71□□□□□ -1.18
USP38-202ENST00000510377 P0C880 135 aa7.71□□□□□ -1.18
USP38-202ENST00000510377 NDUFAF8A1L188 74 aa7.67□□□□□ -1.18
USP38-202ENST00000510377 XP32Q5T750 250 aa7.65□□□□□ -1.18
USP38-202ENST00000510377 FRAS1Q86XX4 4008 aa7.64□□□□□ -1.19
USP38-202ENST00000510377 DNAH7Q8WXX0 4024 aa7.63□□□□□ -1.19
USP38-202ENST00000510377 CMYA5Q8N3K9 4069 aa7.62□□□□□ -1.19
USP38-202ENST00000510377 KMT2AQ03164 3969 aa7.62□□□□□ -1.19
USP38-202ENST00000510377 VPS13DQ5THJ4 4388 aa7.61□□□□□ -1.19
USP38-202ENST00000510377 LUZP6Q538Z0 58 aa7.61□□□□□ -1.19
USP38-202ENST00000510377 CAMK2N1Q7Z7J9 78 aa7.6□□□□□ -1.19
USP38-202ENST00000510377 DNAH17Q9UFH2 4485 aa7.58□□□□□ -1.2
USP38-202ENST00000510377 KRTAP13-4Q3LI77 160 aa7.58□□□□□ -1.2
USP38-202ENST00000510377 DNAH3Q8TD57 4116 aa7.58□□□□□ -1.2
USP38-202ENST00000510377 LRP1BQ9NZR2 4599 aa7.57□□□□□ -1.2
USP38-202ENST00000510377 KRTAP10-8P60410 259 aa7.56□□□□□ -1.2
USP38-202ENST00000510377 PRKDCP78527 4128 aaKnown RBP7.55□□□□□ -1.2
USP38-202ENST00000510377 TPRXLQ17RH7 258 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms