RNA–Protein interactions for RNA: ENST00000509535.5

RACK1-222, Transcript of receptor for activated C kinase 1, human

TSL 3

Gene RACK1, Length 456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RACK1-222	ENST00000509535	CCK	P06307	115 aa		4.67	□□□□□ -1.66
RACK1-222	ENST00000509535	PDE6G	P18545	87 aa		4.67	□□□□□ -1.66
RACK1-222	ENST00000509535	PCOTH	Q58A44	107 aa		4.67	□□□□□ -1.66
RACK1-222	ENST00000509535	MTURN	Q8N3F0	131 aa		4.67	□□□□□ -1.66
RACK1-222	ENST00000509535	MACF1	Q9UPN3	7388 aa	Known RBP	4.66	□□□□□ -1.66
RACK1-222	ENST00000509535		A0A1B0GV72	72 aa		4.66	□□□□□ -1.66
RACK1-222	ENST00000509535		F8W1H4	67 aa		4.66	□□□□□ -1.66
RACK1-222	ENST00000509535		A0A087WSZ3	146 aa		4.65	□□□□□ -1.67
RACK1-222	ENST00000509535	C21orf62-AS1	Q17RA5	79 aa		4.65	□□□□□ -1.67
RACK1-222	ENST00000509535		Q96NJ1	140 aa		4.65	□□□□□ -1.67
RACK1-222	ENST00000509535	C14orf132	Q9NPU4	83 aa		4.65	□□□□□ -1.67
RACK1-222	ENST00000509535	SS18L2	Q9UHA2	77 aa		4.65	□□□□□ -1.67
RACK1-222	ENST00000509535	SYNE2	Q8WXH0	6885 aa	Known RBP	4.64	□□□□□ -1.67
RACK1-222	ENST00000509535	COX6B2	Q6YFQ2	88 aa		4.64	□□□□□ -1.67
RACK1-222	ENST00000509535	LINC00472	Q9H8W2	130 aa		4.63	□□□□□ -1.67
RACK1-222	ENST00000509535	KRTAP19-1	Q8IUB9	90 aa		4.62	□□□□□ -1.67
RACK1-222	ENST00000509535		A0A1B0GV90	55 aa		4.61	□□□□□ -1.67
RACK1-222	ENST00000509535	VPS25	Q9BRG1	176 aa		4.6	□□□□□ -1.67
RACK1-222	ENST00000509535	ETDB	Q3ZM63	59 aa		4.59	□□□□□ -1.67
RACK1-222	ENST00000509535		J3KT08	172 aa		4.55	□□□□□ -1.68
RACK1-222	ENST00000509535	IGKV4-1	P06312	121 aa		4.55	□□□□□ -1.68
RACK1-222	ENST00000509535	C9orf92	A6NGG3	77 aa		4.54	□□□□□ -1.68
RACK1-222	ENST00000509535	NREP	Q16612	68 aa		4.54	□□□□□ -1.68
RACK1-222	ENST00000509535	DEFB116	Q30KQ4	102 aa		4.54	□□□□□ -1.68
RACK1-222	ENST00000509535	KRTAP9-8	Q9BYQ0	159 aa		4.54	□□□□□ -1.68
RACK1-222	ENST00000509535	LINC00846	Q9NV44	126 aa		4.53	□□□□□ -1.68
RACK1-222	ENST00000509535		Q6ZVQ6	151 aa		4.52	□□□□□ -1.69
RACK1-222	ENST00000509535		A0A1B0GVX0	72 aa		4.51	□□□□□ -1.69
RACK1-222	ENST00000509535		A8MWP4	228 aa		4.51	□□□□□ -1.69
RACK1-222	ENST00000509535	LCE2B	O14633	110 aa		4.51	□□□□□ -1.69
RACK1-222	ENST00000509535	DSCR10	P59022	87 aa		4.51	□□□□□ -1.69
RACK1-222	ENST00000509535	FAM240A	A0A1B0GVK7	77 aa		4.5	□□□□□ -1.69
RACK1-222	ENST00000509535	KRTAP16-1	A8MUX0	517 aa		4.5	□□□□□ -1.69
RACK1-222	ENST00000509535	KRTAP6-3	Q3LI67	103 aa		4.5	□□□□□ -1.69
RACK1-222	ENST00000509535	NOTCH2NL	Q7Z3S9	236 aa		4.5	□□□□□ -1.69
RACK1-222	ENST00000509535	SIGMAR1	Q99720	223 aa		4.5	□□□□□ -1.69
RACK1-222	ENST00000509535	IGKV3D-7	A0A0C4DH55	119 aa		4.49	□□□□□ -1.69
RACK1-222	ENST00000509535	C8orf87	E5RJ46	101 aa		4.49	□□□□□ -1.69
RACK1-222	ENST00000509535	ACYP1	P07311	99 aa		4.49	□□□□□ -1.69
RACK1-222	ENST00000509535	LINC00313	P59037	77 aa		4.49	□□□□□ -1.69
RACK1-222	ENST00000509535	RPL37	P61927	97 aa	Known RBP	4.49	□□□□□ -1.69
RACK1-222	ENST00000509535	C20orf166-AS1	Q96NR2	134 aa		4.49	□□□□□ -1.69
RACK1-222	ENST00000509535		A8MUU9	505 aa		4.48	□□□□□ -1.69
RACK1-222	ENST00000509535	NDUFB1	O75438	58 aa		4.48	□□□□□ -1.69
RACK1-222	ENST00000509535		Q75L30	129 aa		4.48	□□□□□ -1.69
RACK1-222	ENST00000509535	PRR15	Q8IV56	129 aa		4.48	□□□□□ -1.69
RACK1-222	ENST00000509535	UBL5	Q9BZL1	73 aa		4.48	□□□□□ -1.69
RACK1-222	ENST00000509535	IGHV6-1	A0A0B4J1U7	121 aa		4.47	□□□□□ -1.69
RACK1-222	ENST00000509535	BPY2	O14599	106 aa		4.47	□□□□□ -1.69
RACK1-222	ENST00000509535	C8orf17	Q9NRJ1	99 aa		4.45	□□□□□ -1.7
RACK1-222	ENST00000509535		K7EQZ3	153 aa		4.44	□□□□□ -1.7
RACK1-222	ENST00000509535	CXCL6	P80162	114 aa		4.44	□□□□□ -1.7
RACK1-222	ENST00000509535		Q8N9P0	234 aa	Predicted RBP	4.44	□□□□□ -1.7
RACK1-222	ENST00000509535	MMP24-AS1	A0A0U1RRL7	71 aa		4.43	□□□□□ -1.7
RACK1-222	ENST00000509535	MT2A	P02795	61 aa		4.43	□□□□□ -1.7
RACK1-222	ENST00000509535	KRTAP19-6	Q3LI70	58 aa		4.42	□□□□□ -1.7
RACK1-222	ENST00000509535	TMEM254	Q8TBM7	123 aa		4.41	□□□□□ -1.7
RACK1-222	ENST00000509535	KRTAP9-3	Q9BYQ3	159 aa		4.41	□□□□□ -1.7
RACK1-222	ENST00000509535		J3QR89	54 aa		4.4	□□□□□ -1.71
RACK1-222	ENST00000509535	MT1F	P04733	61 aa		4.4	□□□□□ -1.71
RACK1-222	ENST00000509535	KRTAP20-1	Q3LI63	56 aa		4.4	□□□□□ -1.71
RACK1-222	ENST00000509535	ATP11AUN	Q6ZP68	121 aa		4.4	□□□□□ -1.71
RACK1-222	ENST00000509535		Q8N9L7	120 aa		4.4	□□□□□ -1.71
RACK1-222	ENST00000509535	NEB	P20929	6669 aa		4.4	□□□□□ -1.71
RACK1-222	ENST00000509535	hDV103S1	A0JD37	113 aa		4.39	□□□□□ -1.71
RACK1-222	ENST00000509535	LINC00643	Q86TS7	51 aa		4.39	□□□□□ -1.71
RACK1-222	ENST00000509535	MRPL34	Q9BQ48	92 aa	Known RBP	4.39	□□□□□ -1.71
RACK1-222	ENST00000509535	ATP5EP2	Q5VTU8	51 aa		4.38	□□□□□ -1.71
RACK1-222	ENST00000509535	HCG22	E2RYF7	251 aa		4.36	□□□□□ -1.71
RACK1-222	ENST00000509535	KRTAP10-10	P60014	251 aa		4.36	□□□□□ -1.71
RACK1-222	ENST00000509535	CASC2	Q6XLA1	102 aa		4.36	□□□□□ -1.71
RACK1-222	ENST00000509535	ZCCHC13	Q8WW36	166 aa	Known RBP	4.35	□□□□□ -1.71
RACK1-222	ENST00000509535		K7ERU9	68 aa		4.34	□□□□□ -1.71
RACK1-222	ENST00000509535	WFDC13	Q8IUB5	93 aa		4.34	□□□□□ -1.71
RACK1-222	ENST00000509535	MUC12	Q9UKN1	5478 aa		4.31	□□□□□ -1.72
RACK1-222	ENST00000509535		Q5W150	140 aa		4.31	□□□□□ -1.72
RACK1-222	ENST00000509535	HIST1H4A	P62805	103 aa	Known RBP	4.29	□□□□□ -1.72
RACK1-222	ENST00000509535		A0A087WVE0	104 aa		4.28	□□□□□ -1.72
RACK1-222	ENST00000509535	NDUFS5	O43920	106 aa		4.28	□□□□□ -1.72
RACK1-222	ENST00000509535	MPLKIP	Q8TAP9	179 aa		4.28	□□□□□ -1.72
RACK1-222	ENST00000509535	IMUP	Q9GZP8	106 aa		4.28	□□□□□ -1.72
RACK1-222	ENST00000509535	TP53AIP1	Q9HCN2	124 aa		4.28	□□□□□ -1.72
RACK1-222	ENST00000509535	HRES1	P13985	223 aa		4.27	□□□□□ -1.73
RACK1-222	ENST00000509535	SPINK7	P58062	85 aa		4.27	□□□□□ -1.73
RACK1-222	ENST00000509535	MT-ATP8	P03928	68 aa		4.24	□□□□□ -1.73
RACK1-222	ENST00000509535	UQCRQ	O14949	82 aa		4.22	□□□□□ -1.73
RACK1-222	ENST00000509535	OCR1	Q9BZK8	76 aa		4.22	□□□□□ -1.73
RACK1-222	ENST00000509535	FAM236D	A0A1B0GTK5	79 aa		4.21	□□□□□ -1.74
RACK1-222	ENST00000509535	IGKV2-30	P06310	120 aa		4.21	□□□□□ -1.74
RACK1-222	ENST00000509535	FAM236C	P0DP71	79 aa		4.21	□□□□□ -1.74
RACK1-222	ENST00000509535	C7orf65	Q6ZTY9	151 aa		4.21	□□□□□ -1.74
RACK1-222	ENST00000509535	TRAV22	A0A0B4J277	110 aa		4.19	□□□□□ -1.74
RACK1-222	ENST00000509535	RBM12B-AS1	Q9P1G2	102 aa		4.19	□□□□□ -1.74
RACK1-222	ENST00000509535	IGKV2D-30	A0A075B6S6	120 aa		4.17	□□□□□ -1.74
RACK1-222	ENST00000509535	CYP4F30P	Q9H0H9	118 aa		4.17	□□□□□ -1.74
RACK1-222	ENST00000509535	ATOX1	O00244	68 aa		4.16	□□□□□ -1.74
RACK1-222	ENST00000509535	C5orf47	Q569G3	176 aa		4.16	□□□□□ -1.74
RACK1-222	ENST00000509535	LOC101927531	A0A1B0GV80	90 aa		4.15	□□□□□ -1.75
RACK1-222	ENST00000509535		H0Y9P7	68 aa		4.15	□□□□□ -1.75
RACK1-222	ENST00000509535	KRTAP2-3	P0C7H8	128 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 53 ms