RNA–Protein interactions for RNA: ENST00000509407.5

SPARCL1-206, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-206ENST00000509407 TACC2O95359 2948 aa2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 SPENQ96T58 3664 aaKnown RBP2.25□□□□□ -2.05
SPARCL1-206ENST00000509407 AKAP9Q99996 3911 aa2.24□□□□□ -2.05
SPARCL1-206ENST00000509407 POLQO75417 2590 aa2.24□□□□□ -2.05
SPARCL1-206ENST00000509407 KRTAP10-1P60331 282 aa2.24□□□□□ -2.05
SPARCL1-206ENST00000509407 PIGYQ3MUY2 71 aa2.24□□□□□ -2.05
SPARCL1-206ENST00000509407 LCE1CQ5T751 118 aa2.24□□□□□ -2.05
SPARCL1-206ENST00000509407 LCE1BQ5T7P3 118 aa2.24□□□□□ -2.05
SPARCL1-206ENST00000509407 MINOS1Q5TGZ0 78 aa2.24□□□□□ -2.05
SPARCL1-206ENST00000509407 AKAP6Q13023 2319 aa2.23□□□□□ -2.05
SPARCL1-206ENST00000509407 ITPR3Q14573 2671 aa2.23□□□□□ -2.05
SPARCL1-206ENST00000509407 ABCA2Q9BZC7 2435 aa2.23□□□□□ -2.05
SPARCL1-206ENST00000509407 DCHS2Q6V1P9 2916 aa2.23□□□□□ -2.05
SPARCL1-206ENST00000509407 FLNAP21333 2647 aaKnown RBP2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 OTOGQ6ZRI0 2925 aa2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 CELSR1Q9NYQ6 3014 aa2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 SMR3AQ99954 134 aa2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 C6orf48Q9UBA6 75 aa2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 TEP1Q99973 2627 aaKnown RBP2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 NAV3Q8IVL0 2385 aa2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 MAP1AP78559 2803 aaPredicted RBP2.22□□□□□ -2.05
SPARCL1-206ENST00000509407 PDZD2O15018 2839 aa2.21□□□□□ -2.06
SPARCL1-206ENST00000509407 USF3Q68DE3 2245 aa2.21□□□□□ -2.06
SPARCL1-206ENST00000509407 FBN2P35556 2912 aa2.21□□□□□ -2.06
SPARCL1-206ENST00000509407 SETD2Q9BYW2 2564 aaPredicted RBP2.2□□□□□ -2.06
SPARCL1-206ENST00000509407 LYNX1P0DP58 116 aa2.2□□□□□ -2.06
SPARCL1-206ENST00000509407 HIVEP1P15822 2718 aa2.2□□□□□ -2.06
SPARCL1-206ENST00000509407 NIPBLQ6KC79 2804 aaeCLIP2.2□□□□□ -2.06
SPARCL1-206ENST00000509407 MTORP42345 2549 aa2.2□□□□□ -2.06
SPARCL1-206ENST00000509407 ROS1P08922 2347 aa2.19□□□□□ -2.06
SPARCL1-206ENST00000509407 I3L2K1 104 aa2.19□□□□□ -2.06
SPARCL1-206ENST00000509407 PLCE1Q9P212 2302 aa2.18□□□□□ -2.06
SPARCL1-206ENST00000509407 JMJD1CQ15652 2540 aa2.18□□□□□ -2.06
SPARCL1-206ENST00000509407 DEFB108BQ8NET1 73 aa2.18□□□□□ -2.06
SPARCL1-206ENST00000509407 TTTY10Q9BZA0 68 aa2.18□□□□□ -2.06
SPARCL1-206ENST00000509407 CSMD1Q96PZ7 3565 aa2.18□□□□□ -2.06
SPARCL1-206ENST00000509407 SORL1Q92673 2214 aa2.18□□□□□ -2.06
SPARCL1-206ENST00000509407 ACANP16112 2415 aa2.18□□□□□ -2.06
SPARCL1-206ENST00000509407 NSD1Q96L73 2696 aaPredicted RBP2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 HRNRQ86YZ3 2850 aaPredicted RBP2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 CSMD2Q7Z408 3487 aa2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 TLN2Q9Y4G6 2542 aa2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 POLR2KP53803 58 aaKnown RBP2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 PCOTHQ58A44 107 aa2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 LINC01590Q5TEZ4 76 aa2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 CSPG4Q6UVK1 2322 aa2.17□□□□□ -2.06
SPARCL1-206ENST00000509407 SONP18583 2426 aaKnown RBP2.16□□□□□ -2.06
SPARCL1-206ENST00000509407 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP2.16□□□□□ -2.06
SPARCL1-206ENST00000509407 H0YAA0 97 aa2.16□□□□□ -2.06
SPARCL1-206ENST00000509407 BRD3OSQ6XYD6 125 aa2.16□□□□□ -2.06
SPARCL1-206ENST00000509407 NF1P21359 2839 aa2.16□□□□□ -2.06
SPARCL1-206ENST00000509407 COX6A2Q02221 97 aa2.15□□□□□ -2.07
SPARCL1-206ENST00000509407 VPS13CQ709C8 3753 aa2.15□□□□□ -2.07
SPARCL1-206ENST00000509407 WNK2Q9Y3S1 2297 aa2.14□□□□□ -2.07
SPARCL1-206ENST00000509407 H3BUX3 64 aa2.14□□□□□ -2.07
SPARCL1-206ENST00000509407 KAAG1Q9UBP8 84 aa2.14□□□□□ -2.07
SPARCL1-206ENST00000509407 ATRQ13535 2644 aa2.14□□□□□ -2.07
SPARCL1-206ENST00000509407 MXRA5Q9NR99 2828 aa2.13□□□□□ -2.07
SPARCL1-206ENST00000509407 RPS27P42677 84 aaKnown RBP2.13□□□□□ -2.07
SPARCL1-206ENST00000509407 WFDC13Q8IUB5 93 aa2.13□□□□□ -2.07
SPARCL1-206ENST00000509407 COL6A5A8TX70 2615 aa2.13□□□□□ -2.07
SPARCL1-206ENST00000509407 H3BSH0 61 aa2.12□□□□□ -2.07
SPARCL1-206ENST00000509407 K7EIL1 84 aa2.12□□□□□ -2.07
SPARCL1-206ENST00000509407 WFDC10BQ8IUB3 73 aa2.12□□□□□ -2.07
SPARCL1-206ENST00000509407 ANK2Q01484 3957 aa2.12□□□□□ -2.07
SPARCL1-206ENST00000509407 ZANQ9Y493 2812 aa2.12□□□□□ -2.07
SPARCL1-206ENST00000509407 ZNF469Q96JG9 3925 aaPredicted RBP2.11□□□□□ -2.07
SPARCL1-206ENST00000509407 IGLV5-48A0A075B6I7 105 aa2.11□□□□□ -2.07
SPARCL1-206ENST00000509407 SPRR5A0A1B0GTR4 108 aa2.11□□□□□ -2.07
SPARCL1-206ENST00000509407 Q6ZSA8 131 aa2.11□□□□□ -2.07
SPARCL1-206ENST00000509407 STAB1Q9NY15 2570 aa2.11□□□□□ -2.07
SPARCL1-206ENST00000509407 RPL39P62891 51 aaKnown RBP2.1□□□□□ -2.07
SPARCL1-206ENST00000509407 H1FX-AS1Q4G0G2 97 aa2.09□□□□□ -2.07
SPARCL1-206ENST00000509407 C10orf95Q9H7T3 257 aa2.09□□□□□ -2.07
SPARCL1-206ENST00000509407 FBN3Q75N90 2809 aa2.09□□□□□ -2.07
SPARCL1-206ENST00000509407 RPL39LQ96EH5 51 aaKnown RBP2.08□□□□□ -2.08
SPARCL1-206ENST00000509407 DNHD1Q96M86 4753 aa2.07□□□□□ -2.08
SPARCL1-206ENST00000509407 PRO0255Q9UI72 69 aa2.07□□□□□ -2.08
SPARCL1-206ENST00000509407 NBEAL1Q6ZS30 2694 aa2.07□□□□□ -2.08
SPARCL1-206ENST00000509407 FBN1P35555 2871 aaKnown RBP2.07□□□□□ -2.08
SPARCL1-206ENST00000509407 DEFB130BP0DP73 79 aa2.06□□□□□ -2.08
SPARCL1-206ENST00000509407 DEFB130AP0DP74 79 aa2.06□□□□□ -2.08
SPARCL1-206ENST00000509407 DEFB131AP59861 70 aa2.06□□□□□ -2.08
SPARCL1-206ENST00000509407 H3BUA1 57 aa2.05□□□□□ -2.08
SPARCL1-206ENST00000509407 LELP1Q5T871 98 aa2.05□□□□□ -2.08
SPARCL1-206ENST00000509407 LEAP2Q969E1 77 aa2.05□□□□□ -2.08
SPARCL1-206ENST00000509407 MGAM2Q2M2H8 2515 aa2.04□□□□□ -2.08
SPARCL1-206ENST00000509407 APLNQ9ULZ1 77 aa2.04□□□□□ -2.08
SPARCL1-206ENST00000509407 FLG2Q5D862 2391 aaPredicted RBP2.03□□□□□ -2.08
SPARCL1-206ENST00000509407 ANK3Q12955 4377 aaKnown RBP2.03□□□□□ -2.08
SPARCL1-206ENST00000509407 SPRR1AP35321 89 aa2.03□□□□□ -2.08
SPARCL1-206ENST00000509407 PRCDQ00LT1 54 aa2.03□□□□□ -2.08
SPARCL1-206ENST00000509407 CUBNO60494 3623 aa2.02□□□□□ -2.09
SPARCL1-206ENST00000509407 KRTAP12-1P59990 96 aa2.02□□□□□ -2.09
SPARCL1-206ENST00000509407 WT1-ASQ06250 92 aa2.02□□□□□ -2.09
SPARCL1-206ENST00000509407 DEFB136Q30KP8 78 aa2.02□□□□□ -2.09
SPARCL1-206ENST00000509407 RPL39P5Q59GN2 51 aa2.02□□□□□ -2.09
SPARCL1-206ENST00000509407 Q5VSD8 79 aa2.02□□□□□ -2.09
SPARCL1-206ENST00000509407 WNK1Q9H4A3 2382 aa2.02□□□□□ -2.09
SPARCL1-206ENST00000509407 SPINK9Q5DT21 86 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms