RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 FABP2P12104 132 aa3.85□□□□□ -1.79
TOPBP1-207ENST00000509162 ORMDL1Q9P0S3 153 aa3.85□□□□□ -1.79
TOPBP1-207ENST00000509162 TRBV7-4A0A0J9YYF1 115 aa3.84□□□□□ -1.79
TOPBP1-207ENST00000509162 H3BMG7 143 aa3.84□□□□□ -1.79
TOPBP1-207ENST00000509162 M0R143 59 aa3.84□□□□□ -1.79
TOPBP1-207ENST00000509162 PCOTHQ58A44 107 aa3.84□□□□□ -1.79
TOPBP1-207ENST00000509162 NOTCH2NLQ7Z3S9 236 aa3.84□□□□□ -1.79
TOPBP1-207ENST00000509162 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
TOPBP1-207ENST00000509162 BATFQ16520 125 aa3.83□□□□□ -1.8
TOPBP1-207ENST00000509162 IGKV2D-30A0A075B6S6 120 aa3.82□□□□□ -1.8
TOPBP1-207ENST00000509162 TSTD3H0UI37 97 aa3.82□□□□□ -1.8
TOPBP1-207ENST00000509162 DNAL4O96015 105 aa3.82□□□□□ -1.8
TOPBP1-207ENST00000509162 TEN1Q86WV5 123 aa3.82□□□□□ -1.8
TOPBP1-207ENST00000509162 KRTAP16-1A8MUX0 517 aa3.81□□□□□ -1.8
TOPBP1-207ENST00000509162 MTURNQ8N3F0 131 aa3.81□□□□□ -1.8
TOPBP1-207ENST00000509162 COX6CP09669 75 aa3.8□□□□□ -1.8
TOPBP1-207ENST00000509162 ANKRD29Q8N6D5 301 aa3.8□□□□□ -1.8
TOPBP1-207ENST00000509162 OBSCN-AS1Q96MR7 158 aa3.8□□□□□ -1.8
TOPBP1-207ENST00000509162 LINC00472Q9H8W2 130 aa3.8□□□□□ -1.8
TOPBP1-207ENST00000509162 TMEM256-PLSCR3K7ERE1 68 aa3.79□□□□□ -1.8
TOPBP1-207ENST00000509162 SCGB1C2P0DMR2 95 aa3.79□□□□□ -1.8
TOPBP1-207ENST00000509162 DSCR10P59022 87 aa3.79□□□□□ -1.8
TOPBP1-207ENST00000509162 CCKP06307 115 aa3.78□□□□□ -1.8
TOPBP1-207ENST00000509162 BAALC-AS2P0C853 105 aa3.78□□□□□ -1.8
TOPBP1-207ENST00000509162 ATXN8Q156A1 80 aa3.78□□□□□ -1.8
TOPBP1-207ENST00000509162 DEFB116Q30KQ4 102 aa3.78□□□□□ -1.8
TOPBP1-207ENST00000509162 Q6ZQT0 140 aa3.78□□□□□ -1.8
TOPBP1-207ENST00000509162 A0A1W2PPM0 123 aa3.77□□□□□ -1.81
TOPBP1-207ENST00000509162 KRTAP10-7P60409 375 aaPredicted RBP3.77□□□□□ -1.81
TOPBP1-207ENST00000509162 MT1HP80294 61 aa3.77□□□□□ -1.81
TOPBP1-207ENST00000509162 C20orf166-AS1Q96NR2 134 aa3.77□□□□□ -1.81
TOPBP1-207ENST00000509162 SS18L2Q9UHA2 77 aa3.77□□□□□ -1.81
TOPBP1-207ENST00000509162 A8MUU9 505 aa3.76□□□□□ -1.81
TOPBP1-207ENST00000509162 C9JAW5 83 aa3.76□□□□□ -1.81
TOPBP1-207ENST00000509162 SNCGO76070 127 aa3.76□□□□□ -1.81
TOPBP1-207ENST00000509162 SIGMAR1Q99720 223 aa3.76□□□□□ -1.81
TOPBP1-207ENST00000509162 LOC110117498A0A087WWA1 95 aa3.75□□□□□ -1.81
TOPBP1-207ENST00000509162 H3BQ85 93 aa3.75□□□□□ -1.81
TOPBP1-207ENST00000509162 C14orf132Q9NPU4 83 aa3.75□□□□□ -1.81
TOPBP1-207ENST00000509162 PRO0461Q9UI25 63 aa3.75□□□□□ -1.81
TOPBP1-207ENST00000509162 IGKV4-1P06312 121 aa3.74□□□□□ -1.81
TOPBP1-207ENST00000509162 RBM3P98179 157 aaKnown RBP3.74□□□□□ -1.81
TOPBP1-207ENST00000509162 VPS25Q9BRG1 176 aa3.74□□□□□ -1.81
TOPBP1-207ENST00000509162 SEC61GP60059 68 aa3.73□□□□□ -1.81
TOPBP1-207ENST00000509162 OCR1Q9BZK8 76 aa3.73□□□□□ -1.81
TOPBP1-207ENST00000509162 TRBV20-1A0A075B6N2 111 aa3.72□□□□□ -1.81
TOPBP1-207ENST00000509162 PCP4L1A6NKN8 68 aa3.72□□□□□ -1.81
TOPBP1-207ENST00000509162 DSCR8Q96T75 97 aa3.72□□□□□ -1.81
TOPBP1-207ENST00000509162 A0A0U1RQV1 116 aa3.71□□□□□ -1.82
TOPBP1-207ENST00000509162 A0A1B0GVX0 72 aa3.71□□□□□ -1.82
TOPBP1-207ENST00000509162 H3BT86 120 aa3.71□□□□□ -1.82
TOPBP1-207ENST00000509162 LYRM7Q5U5X0 104 aa3.71□□□□□ -1.82
TOPBP1-207ENST00000509162 SPCS1Q9Y6A9 102 aa3.71□□□□□ -1.82
TOPBP1-207ENST00000509162 IGHV6-1A0A0B4J1U7 121 aa3.7□□□□□ -1.82
TOPBP1-207ENST00000509162 K7EP34 96 aa3.7□□□□□ -1.82
TOPBP1-207ENST00000509162 IGKV3D-7A0A0C4DH55 119 aa3.69□□□□□ -1.82
TOPBP1-207ENST00000509162 JMJD7-PLA2G4BH0Y9G9 81 aa3.69□□□□□ -1.82
TOPBP1-207ENST00000509162 KRTAP5-9P26371 169 aa3.69□□□□□ -1.82
TOPBP1-207ENST00000509162 COL5A1-AS1Q5SY13 56 aa3.69□□□□□ -1.82
TOPBP1-207ENST00000509162 FSIP2Q5CZC0 6907 aa3.67□□□□□ -1.82
TOPBP1-207ENST00000509162 MMP24-AS1A0A0U1RRL7 71 aa3.67□□□□□ -1.82
TOPBP1-207ENST00000509162 HRES1P13985 223 aa3.67□□□□□ -1.82
TOPBP1-207ENST00000509162 LINC00313P59037 77 aa3.67□□□□□ -1.82
TOPBP1-207ENST00000509162 USH2AO75445 5202 aa3.67□□□□□ -1.82
TOPBP1-207ENST00000509162 A8MWP4 228 aa3.66□□□□□ -1.82
TOPBP1-207ENST00000509162 KRTAP10-6P60371 365 aaPredicted RBP3.66□□□□□ -1.82
TOPBP1-207ENST00000509162 C8orf17Q9NRJ1 99 aa3.66□□□□□ -1.82
TOPBP1-207ENST00000509162 SSPOA2VEC9 5147 aa3.65□□□□□ -1.82
TOPBP1-207ENST00000509162 C8orf87E5RJ46 101 aa3.65□□□□□ -1.83
TOPBP1-207ENST00000509162 K7EQZ3 153 aa3.65□□□□□ -1.83
TOPBP1-207ENST00000509162 J3KT08 172 aa3.64□□□□□ -1.83
TOPBP1-207ENST00000509162 ATP11AUNQ6ZP68 121 aa3.64□□□□□ -1.83
TOPBP1-207ENST00000509162 Q8N9L7 120 aa3.64□□□□□ -1.83
TOPBP1-207ENST00000509162 A0A1B0GW54 56 aa3.63□□□□□ -1.83
TOPBP1-207ENST00000509162 PDE6GP18545 87 aa3.63□□□□□ -1.83
TOPBP1-207ENST00000509162 PRR15Q8IV56 129 aa3.63□□□□□ -1.83
TOPBP1-207ENST00000509162 KRTAP5-1Q6L8H4 278 aa3.62□□□□□ -1.83
TOPBP1-207ENST00000509162 ZCCHC13Q8WW36 166 aaKnown RBP3.62□□□□□ -1.83
TOPBP1-207ENST00000509162 KRTAP2-2Q9BYT5 123 aa3.62□□□□□ -1.83
TOPBP1-207ENST00000509162 LINC00846Q9NV44 126 aa3.62□□□□□ -1.83
TOPBP1-207ENST00000509162 BPY2O14599 106 aa3.61□□□□□ -1.83
TOPBP1-207ENST00000509162 NREPQ16612 68 aa3.6□□□□□ -1.83
TOPBP1-207ENST00000509162 KRTAP5-4Q6L8H1 288 aa3.59□□□□□ -1.83
TOPBP1-207ENST00000509162 COX6B2Q6YFQ2 88 aa3.59□□□□□ -1.83
TOPBP1-207ENST00000509162 ETDBQ3ZM63 59 aa3.58□□□□□ -1.84
TOPBP1-207ENST00000509162 Q5W150 140 aa3.58□□□□□ -1.84
TOPBP1-207ENST00000509162 TMEM254Q8TBM7 123 aa3.58□□□□□ -1.84
TOPBP1-207ENST00000509162 MRPL34Q9BQ48 92 aaKnown RBP3.57□□□□□ -1.84
TOPBP1-207ENST00000509162 NDUFB1O75438 58 aa3.56□□□□□ -1.84
TOPBP1-207ENST00000509162 SPINK7P58062 85 aa3.56□□□□□ -1.84
TOPBP1-207ENST00000509162 A0A1B0GV90 55 aa3.55□□□□□ -1.84
TOPBP1-207ENST00000509162 hDV103S1A0JD37 113 aa3.55□□□□□ -1.84
TOPBP1-207ENST00000509162 MT2AP02795 61 aa3.55□□□□□ -1.84
TOPBP1-207ENST00000509162 GTF2H5Q6ZYL4 71 aa3.55□□□□□ -1.84
TOPBP1-207ENST00000509162 WFDC13Q8IUB5 93 aa3.55□□□□□ -1.84
TOPBP1-207ENST00000509162 NDUFAF8A1L188 74 aa3.54□□□□□ -1.84
TOPBP1-207ENST00000509162 F8W1H4 67 aa3.53□□□□□ -1.84
TOPBP1-207ENST00000509162 MT1FP04733 61 aa3.53□□□□□ -1.84
TOPBP1-207ENST00000509162 KRTAP4-4Q9BYR3 166 aa3.53□□□□□ -1.84
TOPBP1-207ENST00000509162 M0R2T5 61 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms