RNA–Protein interactions for RNA: ENST00000508895.5

SNCA-211, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 3 BASIC

Gene SNCA, Length 905 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-211ENST00000508895 C9orf92A6NGG3 77 aa4.71□□□□□ -1.66
SNCA-211ENST00000508895 KRTAP19-2Q3LHN2 52 aa4.7□□□□□ -1.66
SNCA-211ENST00000508895 PDE6GP18545 87 aa4.67□□□□□ -1.66
SNCA-211ENST00000508895 SIGMAR1Q99720 223 aa4.67□□□□□ -1.66
SNCA-211ENST00000508895 LINC00472Q9H8W2 130 aa4.67□□□□□ -1.66
SNCA-211ENST00000508895 PCOTHQ58A44 107 aa4.66□□□□□ -1.66
SNCA-211ENST00000508895 GTF2H5Q6ZYL4 71 aa4.66□□□□□ -1.66
SNCA-211ENST00000508895 DEFB116Q30KQ4 102 aa4.65□□□□□ -1.67
SNCA-211ENST00000508895 A0A1B0GW54 56 aa4.64□□□□□ -1.67
SNCA-211ENST00000508895 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.64□□□□□ -1.67
SNCA-211ENST00000508895 IGKV4-1P06312 121 aa4.64□□□□□ -1.67
SNCA-211ENST00000508895 SEC61BP60468 96 aaKnown RBP4.64□□□□□ -1.67
SNCA-211ENST00000508895 C21orf62-AS1Q17RA5 79 aa4.64□□□□□ -1.67
SNCA-211ENST00000508895 RPL37P61927 97 aaKnown RBP4.62□□□□□ -1.67
SNCA-211ENST00000508895 F8W1H4 67 aa4.61□□□□□ -1.67
SNCA-211ENST00000508895 DSCR10P59022 87 aa4.61□□□□□ -1.67
SNCA-211ENST00000508895 FLGP20930 4061 aaPredicted RBP4.61□□□□□ -1.67
SNCA-211ENST00000508895 A0A1B0GV90 55 aa4.6□□□□□ -1.67
SNCA-211ENST00000508895 KRTAP16-1A8MUX0 517 aa4.6□□□□□ -1.67
SNCA-211ENST00000508895 ETDBQ3ZM63 59 aa4.6□□□□□ -1.67
SNCA-211ENST00000508895 NOTCH2NLQ7Z3S9 236 aa4.6□□□□□ -1.67
SNCA-211ENST00000508895 A0A1B0GVX0 72 aa4.59□□□□□ -1.67
SNCA-211ENST00000508895 J3KT08 172 aa4.59□□□□□ -1.67
SNCA-211ENST00000508895 IGHV6-1A0A0B4J1U7 121 aa4.58□□□□□ -1.68
SNCA-211ENST00000508895 MT1HP80294 61 aa4.58□□□□□ -1.68
SNCA-211ENST00000508895 Q75L30 129 aa4.58□□□□□ -1.68
SNCA-211ENST00000508895 C20orf166-AS1Q96NR2 134 aa4.58□□□□□ -1.68
SNCA-211ENST00000508895 A8MUU9 505 aa4.57□□□□□ -1.68
SNCA-211ENST00000508895 NREPQ16612 68 aa4.57□□□□□ -1.68
SNCA-211ENST00000508895 IGKV3D-7A0A0C4DH55 119 aa4.56□□□□□ -1.68
SNCA-211ENST00000508895 A8MWP4 228 aa4.56□□□□□ -1.68
SNCA-211ENST00000508895 LINC00313P59037 77 aa4.56□□□□□ -1.68
SNCA-211ENST00000508895 Q6ZVQ6 151 aa4.56□□□□□ -1.68
SNCA-211ENST00000508895 LINC00846Q9NV44 126 aa4.56□□□□□ -1.68
SNCA-211ENST00000508895 C8orf87E5RJ46 101 aa4.55□□□□□ -1.68
SNCA-211ENST00000508895 K7EQZ3 153 aa4.53□□□□□ -1.68
SNCA-211ENST00000508895 NDUFB1O75438 58 aa4.53□□□□□ -1.68
SNCA-211ENST00000508895 PRR15Q8IV56 129 aa4.53□□□□□ -1.68
SNCA-211ENST00000508895 C8orf17Q9NRJ1 99 aa4.53□□□□□ -1.68
SNCA-211ENST00000508895 MMP24-AS1A0A0U1RRL7 71 aa4.52□□□□□ -1.69
SNCA-211ENST00000508895 BPY2O14599 106 aa4.52□□□□□ -1.69
SNCA-211ENST00000508895 Q8N9L7 120 aa4.51□□□□□ -1.69
SNCA-211ENST00000508895 UBL5Q9BZL1 73 aa4.51□□□□□ -1.69
SNCA-211ENST00000508895 ATP11AUNQ6ZP68 121 aa4.5□□□□□ -1.69
SNCA-211ENST00000508895 FAM240AA0A1B0GVK7 77 aa4.48□□□□□ -1.69
SNCA-211ENST00000508895 KRTAP10-6P60371 365 aaPredicted RBP4.48□□□□□ -1.69
SNCA-211ENST00000508895 Q8N9P0 234 aaPredicted RBP4.48□□□□□ -1.69
SNCA-211ENST00000508895 TMEM254Q8TBM7 123 aa4.47□□□□□ -1.69
SNCA-211ENST00000508895 hDV103S1A0JD37 113 aa4.45□□□□□ -1.7
SNCA-211ENST00000508895 CXCL6P80162 114 aa4.45□□□□□ -1.7
SNCA-211ENST00000508895 ZCCHC13Q8WW36 166 aaKnown RBP4.45□□□□□ -1.7
SNCA-211ENST00000508895 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
SNCA-211ENST00000508895 ACYP1P07311 99 aa4.44□□□□□ -1.7
SNCA-211ENST00000508895 WFDC13Q8IUB5 93 aa4.44□□□□□ -1.7
SNCA-211ENST00000508895 SYNE2Q8WXH0 6885 aaKnown RBP4.42□□□□□ -1.7
SNCA-211ENST00000508895 HCG22E2RYF7 251 aa4.42□□□□□ -1.7
SNCA-211ENST00000508895 CASC2Q6XLA1 102 aa4.42□□□□□ -1.7
SNCA-211ENST00000508895 ATP5EP2Q5VTU8 51 aa4.41□□□□□ -1.7
SNCA-211ENST00000508895 COX6B2Q6YFQ2 88 aa4.4□□□□□ -1.71
SNCA-211ENST00000508895 NDUFS5O43920 106 aa4.39□□□□□ -1.71
SNCA-211ENST00000508895 HRES1P13985 223 aa4.39□□□□□ -1.71
SNCA-211ENST00000508895 MPLKIPQ8TAP9 179 aa4.38□□□□□ -1.71
SNCA-211ENST00000508895 M0R2T5 61 aa4.37□□□□□ -1.71
SNCA-211ENST00000508895 Q5W150 140 aa4.37□□□□□ -1.71
SNCA-211ENST00000508895 FCGBPQ9Y6R7 5405 aaPredicted RBP4.36□□□□□ -1.71
SNCA-211ENST00000508895 SPINK7P58062 85 aa4.36□□□□□ -1.71
SNCA-211ENST00000508895 LINC00643Q86TS7 51 aa4.36□□□□□ -1.71
SNCA-211ENST00000508895 KRTAP9-8Q9BYQ0 159 aa4.36□□□□□ -1.71
SNCA-211ENST00000508895 J3QR89 54 aa4.35□□□□□ -1.71
SNCA-211ENST00000508895 SSPOA2VEC9 5147 aa4.35□□□□□ -1.71
SNCA-211ENST00000508895 MACF1Q9UPN3 7388 aaKnown RBP4.34□□□□□ -1.71
SNCA-211ENST00000508895 A0A087WVE0 104 aa4.34□□□□□ -1.71
SNCA-211ENST00000508895 HIST1H4AP62805 103 aaKnown RBP4.33□□□□□ -1.72
SNCA-211ENST00000508895 USH2AO75445 5202 aa4.32□□□□□ -1.72
SNCA-211ENST00000508895 IGKV2D-30A0A075B6S6 120 aa4.3□□□□□ -1.72
SNCA-211ENST00000508895 IGKV2-30P06310 120 aa4.3□□□□□ -1.72
SNCA-211ENST00000508895 C7orf65Q6ZTY9 151 aa4.3□□□□□ -1.72
SNCA-211ENST00000508895 KRTAP4-8Q9BYQ9 185 aa4.3□□□□□ -1.72
SNCA-211ENST00000508895 RBM12B-AS1Q9P1G2 102 aa4.3□□□□□ -1.72
SNCA-211ENST00000508895 FAM236DA0A1B0GTK5 79 aa4.29□□□□□ -1.72
SNCA-211ENST00000508895 K7ERU9 68 aa4.29□□□□□ -1.72
SNCA-211ENST00000508895 MT2AP02795 61 aa4.29□□□□□ -1.72
SNCA-211ENST00000508895 FAM236CP0DP71 79 aa4.29□□□□□ -1.72
SNCA-211ENST00000508895 TP53AIP1Q9HCN2 124 aa4.29□□□□□ -1.72
SNCA-211ENST00000508895 MT1FP04733 61 aa4.27□□□□□ -1.73
SNCA-211ENST00000508895 TRAV22A0A0B4J277 110 aa4.26□□□□□ -1.73
SNCA-211ENST00000508895 MT-ATP8P03928 68 aa4.25□□□□□ -1.73
SNCA-211ENST00000508895 OCR1Q9BZK8 76 aa4.23□□□□□ -1.73
SNCA-211ENST00000508895 UQCRQO14949 82 aa4.22□□□□□ -1.73
SNCA-211ENST00000508895 H0Y9P7 68 aa4.21□□□□□ -1.74
SNCA-211ENST00000508895 C4orf26Q17RF5 130 aa4.21□□□□□ -1.74
SNCA-211ENST00000508895 KRTAP9-3Q9BYQ3 159 aa4.21□□□□□ -1.74
SNCA-211ENST00000508895 IMUPQ9GZP8 106 aa4.2□□□□□ -1.74
SNCA-211ENST00000508895 CYP4F30PQ9H0H9 118 aa4.2□□□□□ -1.74
SNCA-211ENST00000508895 LOC101927531A0A1B0GV80 90 aa4.19□□□□□ -1.74
SNCA-211ENST00000508895 ATOX1O00244 68 aa4.18□□□□□ -1.74
SNCA-211ENST00000508895 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
SNCA-211ENST00000508895 NEBP20929 6669 aa4.17□□□□□ -1.74
SNCA-211ENST00000508895 FAM236AA0A1B0GUQ0 79 aa4.17□□□□□ -1.74
SNCA-211ENST00000508895 FAM236BA0A1B0GV22 79 aa4.17□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms