RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 Q6Q795 121 aa8.73□□□□□ -1.01
LMNA-222ENST00000508500 IGFL1Q6UW32 110 aa8.71□□□□□ -1.02
LMNA-222ENST00000508500 FSIP2Q5CZC0 6907 aa8.7□□□□□ -1.02
LMNA-222ENST00000508500 MT1HP80294 61 aa8.69□□□□□ -1.02
LMNA-222ENST00000508500 A0A1W2PNM2 257 aa8.68□□□□□ -1.02
LMNA-222ENST00000508500 VPS25Q9BRG1 176 aa8.67□□□□□ -1.02
LMNA-222ENST00000508500 UBL5Q9BZL1 73 aa8.67□□□□□ -1.02
LMNA-222ENST00000508500 RPL37P61927 97 aaKnown RBP8.65□□□□□ -1.02
LMNA-222ENST00000508500 LINC00643Q86TS7 51 aa8.65□□□□□ -1.02
LMNA-222ENST00000508500 LINC00846Q9NV44 126 aa8.65□□□□□ -1.02
LMNA-222ENST00000508500 TRBV7-7A0A0K0K1E9 115 aa8.64□□□□□ -1.03
LMNA-222ENST00000508500 FLGP20930 4061 aaPredicted RBP8.62□□□□□ -1.03
LMNA-222ENST00000508500 ATP5EP2Q5VTU8 51 aa8.62□□□□□ -1.03
LMNA-222ENST00000508500 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
LMNA-222ENST00000508500 NREPQ16612 68 aa8.59□□□□□ -1.03
LMNA-222ENST00000508500 Q6ZVQ6 151 aa8.59□□□□□ -1.03
LMNA-222ENST00000508500 SS18L2Q9UHA2 77 aa8.59□□□□□ -1.03
LMNA-222ENST00000508500 SIGMAR1Q99720 223 aa8.57□□□□□ -1.04
LMNA-222ENST00000508500 A0A087WSZ3 146 aa8.55□□□□□ -1.04
LMNA-222ENST00000508500 KRTAP10-6P60371 365 aaPredicted RBP8.55□□□□□ -1.04
LMNA-222ENST00000508500 CXCL6P80162 114 aa8.55□□□□□ -1.04
LMNA-222ENST00000508500 IMUPQ9GZP8 106 aa8.55□□□□□ -1.04
LMNA-222ENST00000508500 J3KT08 172 aa8.5□□□□□ -1.05
LMNA-222ENST00000508500 BPY2O14599 106 aa8.49□□□□□ -1.05
LMNA-222ENST00000508500 MT-ATP8P03928 68 aa8.49□□□□□ -1.05
LMNA-222ENST00000508500 LINC00472Q9H8W2 130 aa8.47□□□□□ -1.05
LMNA-222ENST00000508500 Q75L30 129 aa8.45□□□□□ -1.06
LMNA-222ENST00000508500 IGKV3D-7A0A0C4DH55 119 aa8.44□□□□□ -1.06
LMNA-222ENST00000508500 COX6B2Q6YFQ2 88 aa8.44□□□□□ -1.06
LMNA-222ENST00000508500 SCGB1A1P11684 91 aa8.42□□□□□ -1.06
LMNA-222ENST00000508500 M0R2T5 61 aa8.41□□□□□ -1.06
LMNA-222ENST00000508500 Q96NJ1 140 aa8.41□□□□□ -1.06
LMNA-222ENST00000508500 ATP11AUNQ6ZP68 121 aa8.4□□□□□ -1.06
LMNA-222ENST00000508500 NDUFB1O75438 58 aa8.39□□□□□ -1.07
LMNA-222ENST00000508500 DSCR10P59022 87 aa8.39□□□□□ -1.07
LMNA-222ENST00000508500 A8MWP4 228 aa8.38□□□□□ -1.07
LMNA-222ENST00000508500 IGKV4-1P06312 121 aa8.37□□□□□ -1.07
LMNA-222ENST00000508500 HIST1H4AP62805 103 aaKnown RBP8.37□□□□□ -1.07
LMNA-222ENST00000508500 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
LMNA-222ENST00000508500 A8MUU9 505 aa8.36□□□□□ -1.07
LMNA-222ENST00000508500 PRR15Q8IV56 129 aa8.35□□□□□ -1.07
LMNA-222ENST00000508500 DEFB116Q30KQ4 102 aa8.32□□□□□ -1.08
LMNA-222ENST00000508500 K7EQZ3 153 aa8.31□□□□□ -1.08
LMNA-222ENST00000508500 A0A1B0GVX0 72 aa8.3□□□□□ -1.08
LMNA-222ENST00000508500 KRTAP16-1A8MUX0 517 aa8.29□□□□□ -1.08
LMNA-222ENST00000508500 A0A087WVE0 104 aa8.28□□□□□ -1.08
LMNA-222ENST00000508500 C8orf87E5RJ46 101 aa8.28□□□□□ -1.08
LMNA-222ENST00000508500 Q8N9L7 120 aa8.28□□□□□ -1.08
LMNA-222ENST00000508500 FAM236AA0A1B0GUQ0 79 aa8.27□□□□□ -1.09
LMNA-222ENST00000508500 FAM236BA0A1B0GV22 79 aa8.27□□□□□ -1.09
LMNA-222ENST00000508500 HCG22E2RYF7 251 aa8.26□□□□□ -1.09
LMNA-222ENST00000508500 ATOX1O00244 68 aa8.26□□□□□ -1.09
LMNA-222ENST00000508500 SMIM20Q8N5G0 67 aa8.25□□□□□ -1.09
LMNA-222ENST00000508500 NOTCH2NLQ7Z3S9 236 aa8.24□□□□□ -1.09
LMNA-222ENST00000508500 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.23□□□□□ -1.09
LMNA-222ENST00000508500 KRTAP9-8Q9BYQ0 159 aa8.23□□□□□ -1.09
LMNA-222ENST00000508500 C8orf17Q9NRJ1 99 aa8.23□□□□□ -1.09
LMNA-222ENST00000508500 LINC00313P59037 77 aa8.22□□□□□ -1.09
LMNA-222ENST00000508500 IGHV6-1A0A0B4J1U7 121 aa8.21□□□□□ -1.1
LMNA-222ENST00000508500 MMP24-AS1A0A0U1RRL7 71 aa8.21□□□□□ -1.1
LMNA-222ENST00000508500 KRTAP9-7A8MTY7 169 aa8.2□□□□□ -1.1
LMNA-222ENST00000508500 CASC2Q6XLA1 102 aa8.2□□□□□ -1.1
LMNA-222ENST00000508500 hDV103S1A0JD37 113 aa8.19□□□□□ -1.1
LMNA-222ENST00000508500 TMEM254Q8TBM7 123 aa8.19□□□□□ -1.1
LMNA-222ENST00000508500 WFDC13Q8IUB5 93 aa8.15□□□□□ -1.1
LMNA-222ENST00000508500 MPLKIPQ8TAP9 179 aa8.15□□□□□ -1.1
LMNA-222ENST00000508500 MRPL34Q9BQ48 92 aaKnown RBP8.15□□□□□ -1.1
LMNA-222ENST00000508500 HRES1P13985 223 aa8.14□□□□□ -1.11
LMNA-222ENST00000508500 ANAPC13Q9BS18 74 aa8.14□□□□□ -1.11
LMNA-222ENST00000508500 TRAV7A0A075B6U4 112 aa8.13□□□□□ -1.11
LMNA-222ENST00000508500 TP53AIP1Q9HCN2 124 aa8.13□□□□□ -1.11
LMNA-222ENST00000508500 SERP2Q8N6R1 65 aa8.12□□□□□ -1.11
LMNA-222ENST00000508500 OCR1Q9BZK8 76 aa8.12□□□□□ -1.11
LMNA-222ENST00000508500 USH2AO75445 5202 aa8.1□□□□□ -1.11
LMNA-222ENST00000508500 SSPOA2VEC9 5147 aa8.1□□□□□ -1.11
LMNA-222ENST00000508500 UQCRQO14949 82 aa8.09□□□□□ -1.11
LMNA-222ENST00000508500 Q8N9P0 234 aaPredicted RBP8.09□□□□□ -1.11
LMNA-222ENST00000508500 MT2AP02795 61 aa8.08□□□□□ -1.12
LMNA-222ENST00000508500 COX7CP15954 63 aa8.07□□□□□ -1.12
LMNA-222ENST00000508500 FAM236DA0A1B0GTK5 79 aa8.05□□□□□ -1.12
LMNA-222ENST00000508500 FAM236CP0DP71 79 aa8.05□□□□□ -1.12
LMNA-222ENST00000508500 PCP4P48539 62 aa8.05□□□□□ -1.12
LMNA-222ENST00000508500 C5orf47Q569G3 176 aa8.05□□□□□ -1.12
LMNA-222ENST00000508500 NDUFS5O43920 106 aa8.02□□□□□ -1.13
LMNA-222ENST00000508500 MT1FP04733 61 aa8.02□□□□□ -1.13
LMNA-222ENST00000508500 H3BPC8 53 aa8.01□□□□□ -1.13
LMNA-222ENST00000508500 RBM12B-AS1Q9P1G2 102 aa8.01□□□□□ -1.13
LMNA-222ENST00000508500 FCGBPQ9Y6R7 5405 aaPredicted RBP8.01□□□□□ -1.13
LMNA-222ENST00000508500 LCE2BO14633 110 aa7.99□□□□□ -1.13
LMNA-222ENST00000508500 TRAV22A0A0B4J277 110 aa7.98□□□□□ -1.13
LMNA-222ENST00000508500 MP68P56378 58 aa7.98□□□□□ -1.13
LMNA-222ENST00000508500 ZCCHC13Q8WW36 166 aaKnown RBP7.98□□□□□ -1.13
LMNA-222ENST00000508500 KRTAP9-3Q9BYQ3 159 aa7.97□□□□□ -1.13
LMNA-222ENST00000508500 KRTAP19-1Q8IUB9 90 aa7.95□□□□□ -1.14
LMNA-222ENST00000508500 SPINK7P58062 85 aa7.94□□□□□ -1.14
LMNA-222ENST00000508500 KLKP1Q107X0 134 aa7.94□□□□□ -1.14
LMNA-222ENST00000508500 H0Y9P7 68 aa7.93□□□□□ -1.14
LMNA-222ENST00000508500 C20orf197Q8N268 126 aa7.91□□□□□ -1.14
LMNA-222ENST00000508500 CCDC179H3BU77 68 aa7.9□□□□□ -1.14
LMNA-222ENST00000508500 NDUFC1O43677 76 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms