RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 C20orf166-AS1Q96NR2 134 aa7.4□□□□□ -1.22
RAB28-205ENST00000508274 K7ERU9 68 aa7.39□□□□□ -1.23
RAB28-205ENST00000508274 CRCT1Q9UGL9 99 aa7.39□□□□□ -1.23
RAB28-205ENST00000508274 A8MUU9 505 aa7.38□□□□□ -1.23
RAB28-205ENST00000508274 DNAL4O96015 105 aa7.38□□□□□ -1.23
RAB28-205ENST00000508274 PSMB2P49721 201 aa7.38□□□□□ -1.23
RAB28-205ENST00000508274 DSCR10P59022 87 aa7.38□□□□□ -1.23
RAB28-205ENST00000508274 ORMDL1Q9P0S3 153 aa7.37□□□□□ -1.23
RAB28-205ENST00000508274 SIGMAR1Q99720 223 aa7.37□□□□□ -1.23
RAB28-205ENST00000508274 SCGB1C2P0DMR2 95 aa7.36□□□□□ -1.23
RAB28-205ENST00000508274 ANKRD29Q8N6D5 301 aa7.36□□□□□ -1.23
RAB28-205ENST00000508274 TRBV7-4A0A0J9YYF1 115 aa7.33□□□□□ -1.24
RAB28-205ENST00000508274 MTURNQ8N3F0 131 aa7.33□□□□□ -1.24
RAB28-205ENST00000508274 IGKV4-1P06312 121 aa7.33□□□□□ -1.24
RAB28-205ENST00000508274 COX6CP09669 75 aa7.33□□□□□ -1.24
RAB28-205ENST00000508274 ATXN8Q156A1 80 aa7.33□□□□□ -1.24
RAB28-205ENST00000508274 ETDBQ3ZM63 59 aa7.33□□□□□ -1.24
RAB28-205ENST00000508274 TMEM256-PLSCR3K7ERE1 68 aa7.32□□□□□ -1.24
RAB28-205ENST00000508274 DEFB116Q30KQ4 102 aa7.32□□□□□ -1.24
RAB28-205ENST00000508274 CCKP06307 115 aa7.31□□□□□ -1.24
RAB28-205ENST00000508274 NOTCH2NLQ7Z3S9 236 aa7.31□□□□□ -1.24
RAB28-205ENST00000508274 KRTAP16-1A8MUX0 517 aa7.3□□□□□ -1.24
RAB28-205ENST00000508274 H3BQ85 93 aa7.3□□□□□ -1.24
RAB28-205ENST00000508274 LINC00313P59037 77 aa7.29□□□□□ -1.24
RAB28-205ENST00000508274 C9JAW5 83 aa7.29□□□□□ -1.24
RAB28-205ENST00000508274 J3QR89 54 aa7.29□□□□□ -1.24
RAB28-205ENST00000508274 TRACP01848 142 aa7.29□□□□□ -1.24
RAB28-205ENST00000508274 VPS25Q9BRG1 176 aa7.28□□□□□ -1.24
RAB28-205ENST00000508274 LINC00472Q9H8W2 130 aa7.28□□□□□ -1.24
RAB28-205ENST00000508274 KRTAP4-8A0A0G2JLE6 195 aa7.27□□□□□ -1.25
RAB28-205ENST00000508274 H3BT86 120 aa7.25□□□□□ -1.25
RAB28-205ENST00000508274 IGHV6-1A0A0B4J1U7 121 aa7.25□□□□□ -1.25
RAB28-205ENST00000508274 RBM3P98179 157 aaKnown RBP7.21□□□□□ -1.25
RAB28-205ENST00000508274 DSCR8Q96T75 97 aa7.2□□□□□ -1.26
RAB28-205ENST00000508274 KRTAP9-8Q9BYQ0 159 aa7.2□□□□□ -1.26
RAB28-205ENST00000508274 BAALC-AS2P0C853 105 aa7.19□□□□□ -1.26
RAB28-205ENST00000508274 A0A1B0GVX0 72 aa7.18□□□□□ -1.26
RAB28-205ENST00000508274 HRES1P13985 223 aa7.17□□□□□ -1.26
RAB28-205ENST00000508274 FAM236DA0A1B0GTK5 79 aa7.16□□□□□ -1.26
RAB28-205ENST00000508274 FAM236CP0DP71 79 aa7.16□□□□□ -1.26
RAB28-205ENST00000508274 C8orf87E5RJ46 101 aa7.15□□□□□ -1.27
RAB28-205ENST00000508274 LCE1DQ5T752 114 aa7.15□□□□□ -1.27
RAB28-205ENST00000508274 MPLKIPQ8TAP9 179 aa7.15□□□□□ -1.27
RAB28-205ENST00000508274 Q6ZQT0 140 aa7.13□□□□□ -1.27
RAB28-205ENST00000508274 RBM12B-AS1Q9P1G2 102 aa7.12□□□□□ -1.27
RAB28-205ENST00000508274 FAM240AA0A1B0GVK7 77 aa7.11□□□□□ -1.27
RAB28-205ENST00000508274 J3KT08 172 aa7.11□□□□□ -1.27
RAB28-205ENST00000508274 PCP4P48539 62 aa7.11□□□□□ -1.27
RAB28-205ENST00000508274 LCE4AQ5TA78 99 aa7.1□□□□□ -1.27
RAB28-205ENST00000508274 ZCCHC13Q8WW36 166 aaKnown RBP7.09□□□□□ -1.27
RAB28-205ENST00000508274 MT2AP02795 61 aa7.08□□□□□ -1.28
RAB28-205ENST00000508274 SCGB1A1P11684 91 aa7.08□□□□□ -1.28
RAB28-205ENST00000508274 C21orf62-AS1Q17RA5 79 aa7.08□□□□□ -1.28
RAB28-205ENST00000508274 LOC110117498A0A087WWA1 95 aa7.07□□□□□ -1.28
RAB28-205ENST00000508274 JMJD7-PLA2G4BH0Y9G9 81 aa7.07□□□□□ -1.28
RAB28-205ENST00000508274 Q8N9P0 234 aaPredicted RBP7.06□□□□□ -1.28
RAB28-205ENST00000508274 C14orf132Q9NPU4 83 aa7.06□□□□□ -1.28
RAB28-205ENST00000508274 NDUFB1O75438 58 aa7.05□□□□□ -1.28
RAB28-205ENST00000508274 ACYP1P07311 99 aa7.05□□□□□ -1.28
RAB28-205ENST00000508274 A8MWP4 228 aa7.04□□□□□ -1.28
RAB28-205ENST00000508274 MT1FP04733 61 aa7.04□□□□□ -1.28
RAB28-205ENST00000508274 SPINK7P58062 85 aa7.04□□□□□ -1.28
RAB28-205ENST00000508274 C8orf17Q9NRJ1 99 aa7.04□□□□□ -1.28
RAB28-205ENST00000508274 IGKV3D-7A0A0C4DH55 119 aa7.03□□□□□ -1.28
RAB28-205ENST00000508274 MT-ATP8P03928 68 aa7.03□□□□□ -1.28
RAB28-205ENST00000508274 USH2AO75445 5202 aa7.03□□□□□ -1.28
RAB28-205ENST00000508274 KRTAP9-7A8MTY7 169 aa7.02□□□□□ -1.29
RAB28-205ENST00000508274 SSPOA2VEC9 5147 aa7.01□□□□□ -1.29
RAB28-205ENST00000508274 KRTAP4-7Q9BYR0 210 aa7.01□□□□□ -1.29
RAB28-205ENST00000508274 A0A1B0GW54 56 aa7□□□□□ -1.29
RAB28-205ENST00000508274 PDE6GP18545 87 aa6.99□□□□□ -1.29
RAB28-205ENST00000508274 KRTAP10-10P60014 251 aa6.98□□□□□ -1.29
RAB28-205ENST00000508274 Q6ZVQ6 151 aa6.98□□□□□ -1.29
RAB28-205ENST00000508274 PRR15Q8IV56 129 aa6.97□□□□□ -1.29
RAB28-205ENST00000508274 NREPQ16612 68 aa6.96□□□□□ -1.29
RAB28-205ENST00000508274 WFDC13Q8IUB5 93 aa6.96□□□□□ -1.29
RAB28-205ENST00000508274 KRTAP9-3Q9BYQ3 159 aa6.96□□□□□ -1.29
RAB28-205ENST00000508274 MMP24-AS1A0A0U1RRL7 71 aa6.95□□□□□ -1.3
RAB28-205ENST00000508274 LINC00643Q86TS7 51 aa6.95□□□□□ -1.3
RAB28-205ENST00000508274 K7EQZ3 153 aa6.91□□□□□ -1.3
RAB28-205ENST00000508274 MRPL34Q9BQ48 92 aaKnown RBP6.91□□□□□ -1.3
RAB28-205ENST00000508274 IMUPQ9GZP8 106 aa6.91□□□□□ -1.3
RAB28-205ENST00000508274 TMEM254Q8TBM7 123 aa6.91□□□□□ -1.3
RAB28-205ENST00000508274 KRTAP4-9Q9BYQ8 210 aa6.91□□□□□ -1.3
RAB28-205ENST00000508274 LINC00846Q9NV44 126 aa6.9□□□□□ -1.31
RAB28-205ENST00000508274 hDV103S1A0JD37 113 aa6.88□□□□□ -1.31
RAB28-205ENST00000508274 NDUFS5O43920 106 aa6.86□□□□□ -1.31
RAB28-205ENST00000508274 FCGBPQ9Y6R7 5405 aaPredicted RBP6.85□□□□□ -1.31
RAB28-205ENST00000508274 BPY2O14599 106 aa6.83□□□□□ -1.32
RAB28-205ENST00000508274 ATP5EP2Q5VTU8 51 aa6.82□□□□□ -1.32
RAB28-205ENST00000508274 Q8N9L7 120 aa6.82□□□□□ -1.32
RAB28-205ENST00000508274 ANAPC13Q9BS18 74 aa6.82□□□□□ -1.32
RAB28-205ENST00000508274 Q5W150 140 aa6.81□□□□□ -1.32
RAB28-205ENST00000508274 UBL5Q9BZL1 73 aa6.81□□□□□ -1.32
RAB28-205ENST00000508274 IGKV2D-30A0A075B6S6 120 aa6.79□□□□□ -1.32
RAB28-205ENST00000508274 IGKV2-30P06310 120 aa6.79□□□□□ -1.32
RAB28-205ENST00000508274 HIST1H4AP62805 103 aaKnown RBP6.78□□□□□ -1.32
RAB28-205ENST00000508274 H1FX-AS1Q4G0G2 97 aa6.78□□□□□ -1.32
RAB28-205ENST00000508274 FAM236AA0A1B0GUQ0 79 aa6.78□□□□□ -1.32
RAB28-205ENST00000508274 FAM236BA0A1B0GV22 79 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms