RNA–Protein interactions for RNA: ENST00000506691.1

SNCA-210, Transcript of synuclein alpha, humanhuman

TSL 5

Gene SNCA, Length 387 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-210ENST00000506691 Q96NJ1 140 aa6□□□□□ -1.45
SNCA-210ENST00000506691 IGKV4-1P06312 121 aa5.98□□□□□ -1.45
SNCA-210ENST00000506691 NDUFB1O75438 58 aa5.96□□□□□ -1.46
SNCA-210ENST00000506691 ACYP1P07311 99 aa5.95□□□□□ -1.46
SNCA-210ENST00000506691 SEC61BP60468 96 aaKnown RBP5.95□□□□□ -1.46
SNCA-210ENST00000506691 SIGMAR1Q99720 223 aa5.95□□□□□ -1.46
SNCA-210ENST00000506691 UBL5Q9BZL1 73 aa5.95□□□□□ -1.46
SNCA-210ENST00000506691 C8orf87E5RJ46 101 aa5.93□□□□□ -1.46
SNCA-210ENST00000506691 XP32Q5T750 250 aa5.93□□□□□ -1.46
SNCA-210ENST00000506691 FAM240AA0A1B0GVK7 77 aa5.92□□□□□ -1.46
SNCA-210ENST00000506691 LINC00313P59037 77 aa5.92□□□□□ -1.46
SNCA-210ENST00000506691 A0A1B0GVX0 72 aa5.91□□□□□ -1.46
SNCA-210ENST00000506691 C9orf92A6NGG3 77 aa5.91□□□□□ -1.46
SNCA-210ENST00000506691 A8MWP4 228 aa5.91□□□□□ -1.46
SNCA-210ENST00000506691 BPY2O14599 106 aa5.91□□□□□ -1.46
SNCA-210ENST00000506691 DEFB116Q30KQ4 102 aa5.91□□□□□ -1.46
SNCA-210ENST00000506691 Q6ZVQ6 151 aa5.91□□□□□ -1.46
SNCA-210ENST00000506691 LINC00846Q9NV44 126 aa5.9□□□□□ -1.46
SNCA-210ENST00000506691 J3QR89 54 aa5.89□□□□□ -1.47
SNCA-210ENST00000506691 IGHV6-1A0A0B4J1U7 121 aa5.88□□□□□ -1.47
SNCA-210ENST00000506691 Q75L30 129 aa5.87□□□□□ -1.47
SNCA-210ENST00000506691 PRR15Q8IV56 129 aa5.87□□□□□ -1.47
SNCA-210ENST00000506691 IGKV3D-7A0A0C4DH55 119 aa5.85□□□□□ -1.47
SNCA-210ENST00000506691 DSCR10P59022 87 aa5.85□□□□□ -1.47
SNCA-210ENST00000506691 RPL37P61927 97 aaKnown RBP5.85□□□□□ -1.47
SNCA-210ENST00000506691 CXCL6P80162 114 aa5.85□□□□□ -1.47
SNCA-210ENST00000506691 C20orf166-AS1Q96NR2 134 aa5.85□□□□□ -1.47
SNCA-210ENST00000506691 KRTAP4-1Q9BYQ7 146 aa5.84□□□□□ -1.47
SNCA-210ENST00000506691 A8MUU9 505 aa5.83□□□□□ -1.48
SNCA-210ENST00000506691 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
SNCA-210ENST00000506691 C8orf17Q9NRJ1 99 aa5.83□□□□□ -1.48
SNCA-210ENST00000506691 ATP5EP2Q5VTU8 51 aa5.82□□□□□ -1.48
SNCA-210ENST00000506691 ATP11AUNQ6ZP68 121 aa5.82□□□□□ -1.48
SNCA-210ENST00000506691 KRTAP16-1A8MUX0 517 aa5.81□□□□□ -1.48
SNCA-210ENST00000506691 K7EQZ3 153 aa5.8□□□□□ -1.48
SNCA-210ENST00000506691 NOTCH2NLQ7Z3S9 236 aa5.8□□□□□ -1.48
SNCA-210ENST00000506691 KRTAP19-2Q3LHN2 52 aa5.79□□□□□ -1.48
SNCA-210ENST00000506691 TMEM254Q8TBM7 123 aa5.79□□□□□ -1.48
SNCA-210ENST00000506691 hDV103S1A0JD37 113 aa5.78□□□□□ -1.48
SNCA-210ENST00000506691 MT1HP80294 61 aa5.78□□□□□ -1.48
SNCA-210ENST00000506691 LINC00643Q86TS7 51 aa5.78□□□□□ -1.48
SNCA-210ENST00000506691 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
SNCA-210ENST00000506691 MMP24-AS1A0A0U1RRL7 71 aa5.77□□□□□ -1.49
SNCA-210ENST00000506691 LORP23490 312 aaPredicted RBP5.77□□□□□ -1.49
SNCA-210ENST00000506691 PCOTHQ58A44 107 aa5.77□□□□□ -1.49
SNCA-210ENST00000506691 MRPL34Q9BQ48 92 aaKnown RBP5.77□□□□□ -1.49
SNCA-210ENST00000506691 K7ERU9 68 aa5.76□□□□□ -1.49
SNCA-210ENST00000506691 CASC2Q6XLA1 102 aa5.74□□□□□ -1.49
SNCA-210ENST00000506691 HCG22E2RYF7 251 aa5.73□□□□□ -1.49
SNCA-210ENST00000506691 Q8N9L7 120 aa5.73□□□□□ -1.49
SNCA-210ENST00000506691 KRTAP10-6P60371 365 aaPredicted RBP5.72□□□□□ -1.49
SNCA-210ENST00000506691 ZCCHC13Q8WW36 166 aaKnown RBP5.7□□□□□ -1.5
SNCA-210ENST00000506691 NDUFS5O43920 106 aa5.69□□□□□ -1.5
SNCA-210ENST00000506691 WFDC13Q8IUB5 93 aa5.69□□□□□ -1.5
SNCA-210ENST00000506691 HIST1H4AP62805 103 aaKnown RBP5.68□□□□□ -1.5
SNCA-210ENST00000506691 TP53AIP1Q9HCN2 124 aa5.68□□□□□ -1.5
SNCA-210ENST00000506691 KRTAP9-7A8MTY7 169 aa5.65□□□□□ -1.5
SNCA-210ENST00000506691 IMUPQ9GZP8 106 aa5.65□□□□□ -1.5
SNCA-210ENST00000506691 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.62□□□□□ -1.51
SNCA-210ENST00000506691 M0R2T5 61 aa5.6□□□□□ -1.51
SNCA-210ENST00000506691 SPINK7P58062 85 aa5.6□□□□□ -1.51
SNCA-210ENST00000506691 FLGP20930 4061 aaPredicted RBP5.58□□□□□ -1.52
SNCA-210ENST00000506691 A0A087WVE0 104 aa5.57□□□□□ -1.52
SNCA-210ENST00000506691 UQCRQO14949 82 aa5.57□□□□□ -1.52
SNCA-210ENST00000506691 Q5W150 140 aa5.57□□□□□ -1.52
SNCA-210ENST00000506691 RBM12B-AS1Q9P1G2 102 aa5.57□□□□□ -1.52
SNCA-210ENST00000506691 COX6B2Q6YFQ2 88 aa5.55□□□□□ -1.52
SNCA-210ENST00000506691 C7orf65Q6ZTY9 151 aa5.55□□□□□ -1.52
SNCA-210ENST00000506691 MT-ATP8P03928 68 aa5.54□□□□□ -1.52
SNCA-210ENST00000506691 TRAV22A0A0B4J277 110 aa5.53□□□□□ -1.52
SNCA-210ENST00000506691 ATOX1O00244 68 aa5.53□□□□□ -1.52
SNCA-210ENST00000506691 SCGB1A1P11684 91 aa5.53□□□□□ -1.52
SNCA-210ENST00000506691 HRES1P13985 223 aa5.52□□□□□ -1.53
SNCA-210ENST00000506691 MPLKIPQ8TAP9 179 aa5.52□□□□□ -1.53
SNCA-210ENST00000506691 IGKV2D-30A0A075B6S6 120 aa5.51□□□□□ -1.53
SNCA-210ENST00000506691 IGKV2-30P06310 120 aa5.51□□□□□ -1.53
SNCA-210ENST00000506691 SMIM20Q8N5G0 67 aa5.51□□□□□ -1.53
SNCA-210ENST00000506691 C5orf47Q569G3 176 aa5.5□□□□□ -1.53
SNCA-210ENST00000506691 OCR1Q9BZK8 76 aa5.5□□□□□ -1.53
SNCA-210ENST00000506691 LOC101927531A0A1B0GV80 90 aa5.49□□□□□ -1.53
SNCA-210ENST00000506691 FAM236DA0A1B0GTK5 79 aa5.48□□□□□ -1.53
SNCA-210ENST00000506691 FAM236CP0DP71 79 aa5.48□□□□□ -1.53
SNCA-210ENST00000506691 MP68P56378 58 aa5.48□□□□□ -1.53
SNCA-210ENST00000506691 H3BPC8 53 aa5.47□□□□□ -1.53
SNCA-210ENST00000506691 H0Y9P7 68 aa5.46□□□□□ -1.54
SNCA-210ENST00000506691 CYP4F30PQ9H0H9 118 aa5.45□□□□□ -1.54
SNCA-210ENST00000506691 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
SNCA-210ENST00000506691 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
SNCA-210ENST00000506691 SSPOA2VEC9 5147 aa5.44□□□□□ -1.54
SNCA-210ENST00000506691 C1orf64Q8NEQ6 169 aa5.43□□□□□ -1.54
SNCA-210ENST00000506691 KRTAP9-8Q9BYQ0 159 aa5.43□□□□□ -1.54
SNCA-210ENST00000506691 USH2AO75445 5202 aa5.42□□□□□ -1.54
SNCA-210ENST00000506691 TRAV7A0A075B6U4 112 aa5.42□□□□□ -1.54
SNCA-210ENST00000506691 LINC00208Q96KT6 92 aa5.41□□□□□ -1.54
SNCA-210ENST00000506691 C4orf26Q17RF5 130 aa5.38□□□□□ -1.55
SNCA-210ENST00000506691 H1FX-AS1Q4G0G2 97 aa5.38□□□□□ -1.55
SNCA-210ENST00000506691 FCGBPQ9Y6R7 5405 aaPredicted RBP5.37□□□□□ -1.55
SNCA-210ENST00000506691 MACF1Q9UPN3 7388 aaKnown RBP5.36□□□□□ -1.55
SNCA-210ENST00000506691 SYNE2Q8WXH0 6885 aaKnown RBP5.34□□□□□ -1.55
SNCA-210ENST00000506691 SERP2Q8N6R1 65 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms