RNA–Protein interactions for RNA: ENST00000506626.1

SMAD1-205, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-205ENST00000506626 OTOGQ6ZRI0 2925 aa1.82□□□□□ -2.12
SMAD1-205ENST00000506626 DEFB124Q8NES8 71 aa1.81□□□□□ -2.12
SMAD1-205ENST00000506626 ASH1LQ9NR48 2969 aaKnown RBP1.81□□□□□ -2.12
SMAD1-205ENST00000506626 ZFHX4Q86UP3 3567 aa1.81□□□□□ -2.12
SMAD1-205ENST00000506626 SPEGQ15772 3267 aa1.8□□□□□ -2.12
SMAD1-205ENST00000506626 CDH23Q9H251 3354 aa1.8□□□□□ -2.12
SMAD1-205ENST00000506626 A0A096LNI7 61 aa1.8□□□□□ -2.12
SMAD1-205ENST00000506626 SPINK1P00995 79 aa1.8□□□□□ -2.12
SMAD1-205ENST00000506626 HTN3P15516 51 aa1.8□□□□□ -2.12
SMAD1-205ENST00000506626 ZFHX2Q9C0A1 2572 aaPredicted RBP1.8□□□□□ -2.12
SMAD1-205ENST00000506626 DEFB135Q30KP9 77 aa1.79□□□□□ -2.12
SMAD1-205ENST00000506626 CSMD1Q96PZ7 3565 aa1.79□□□□□ -2.12
SMAD1-205ENST00000506626 SPENQ96T58 3664 aaKnown RBP1.78□□□□□ -2.12
SMAD1-205ENST00000506626 HRNRQ86YZ3 2850 aaPredicted RBP1.78□□□□□ -2.12
SMAD1-205ENST00000506626 PTPN13Q12923 2485 aa1.78□□□□□ -2.12
SMAD1-205ENST00000506626 DEFB4AO15263 64 aa1.77□□□□□ -2.13
SMAD1-205ENST00000506626 SPINK6Q6UWN8 80 aa1.77□□□□□ -2.13
SMAD1-205ENST00000506626 C10orf95Q9H7T3 257 aa1.77□□□□□ -2.13
SMAD1-205ENST00000506626 DCHS2Q6V1P9 2916 aa1.77□□□□□ -2.13
SMAD1-205ENST00000506626 PRRC2CQ9Y520 2896 aaKnown RBP1.77□□□□□ -2.13
SMAD1-205ENST00000506626 CELSR3Q9NYQ7 3312 aa1.77□□□□□ -2.13
SMAD1-205ENST00000506626 OTOGLQ3ZCN5 2332 aa1.77□□□□□ -2.13
SMAD1-205ENST00000506626 TLN1Q9Y490 2541 aaKnown RBP1.76□□□□□ -2.13
SMAD1-205ENST00000506626 LRBAP50851 2863 aa1.76□□□□□ -2.13
SMAD1-205ENST00000506626 INE1O15225 51 aa1.76□□□□□ -2.13
SMAD1-205ENST00000506626 Q6ZRN7 208 aaPredicted RBP1.76□□□□□ -2.13
SMAD1-205ENST00000506626 UBR5O95071 2799 aaPredicted RBP1.76□□□□□ -2.13
SMAD1-205ENST00000506626 RIF1Q5UIP0 2472 aaKnown RBP1.76□□□□□ -2.13
SMAD1-205ENST00000506626 F8P00451 2351 aa1.76□□□□□ -2.13
SMAD1-205ENST00000506626 SMG1Q96Q15 3661 aaKnown RBP1.75□□□□□ -2.13
SMAD1-205ENST00000506626 SPRR5A0A1B0GTR4 108 aa1.75□□□□□ -2.13
SMAD1-205ENST00000506626 UBE2DNLQ8IWF7 75 aa1.75□□□□□ -2.13
SMAD1-205ENST00000506626 DEFB123Q8N688 67 aa1.75□□□□□ -2.13
SMAD1-205ENST00000506626 CELSR1Q9NYQ6 3014 aa1.75□□□□□ -2.13
SMAD1-205ENST00000506626 AKAP9Q99996 3911 aa1.75□□□□□ -2.13
SMAD1-205ENST00000506626 COL12A1Q99715 3063 aa1.75□□□□□ -2.13
SMAD1-205ENST00000506626 APCP25054 2843 aa1.74□□□□□ -2.13
SMAD1-205ENST00000506626 TLN2Q9Y4G6 2542 aa1.74□□□□□ -2.13
SMAD1-205ENST00000506626 MUC6Q6W4X9 2439 aa1.74□□□□□ -2.13
SMAD1-205ENST00000506626 R4GN34 69 aa1.74□□□□□ -2.13
SMAD1-205ENST00000506626 S4R3F8 94 aa1.74□□□□□ -2.13
SMAD1-205ENST00000506626 LOC400499M0QZD8 3231 aa1.74□□□□□ -2.13
SMAD1-205ENST00000506626 ATMQ13315 3056 aa1.74□□□□□ -2.13
SMAD1-205ENST00000506626 SONP18583 2426 aaKnown RBP1.74□□□□□ -2.13
SMAD1-205ENST00000506626 FN1P02751 2386 aaKnown RBP1.73□□□□□ -2.13
SMAD1-205ENST00000506626 SETXQ7Z333 2677 aaKnown RBP1.73□□□□□ -2.13
SMAD1-205ENST00000506626 DMXL1Q9Y485 3027 aa1.73□□□□□ -2.13
SMAD1-205ENST00000506626 NAV2Q8IVL1 2488 aa1.73□□□□□ -2.13
SMAD1-205ENST00000506626 CCDC168Q8NDH2 2452 aa1.73□□□□□ -2.13
SMAD1-205ENST00000506626 APLNQ9ULZ1 77 aa1.72□□□□□ -2.13
SMAD1-205ENST00000506626 MYO15AQ9UKN7 3530 aa1.71□□□□□ -2.13
SMAD1-205ENST00000506626 HIVEP3Q5T1R4 2406 aa1.71□□□□□ -2.14
SMAD1-205ENST00000506626 SPACA4Q8TDM5 124 aa1.71□□□□□ -2.14
SMAD1-205ENST00000506626 ADGRG4Q8IZF6 3080 aa1.71□□□□□ -2.14
SMAD1-205ENST00000506626 DOPEY1Q5JWR5 2465 aa1.7□□□□□ -2.14
SMAD1-205ENST00000506626 TEX15Q9BXT5 2789 aa1.7□□□□□ -2.14
SMAD1-205ENST00000506626 FBN1P35555 2871 aaKnown RBP1.69□□□□□ -2.14
SMAD1-205ENST00000506626 NF1P21359 2839 aa1.69□□□□□ -2.14
SMAD1-205ENST00000506626 A0A0D9SG42 100 aa1.69□□□□□ -2.14
SMAD1-205ENST00000506626 UTP20O75691 2785 aaKnown RBP1.69□□□□□ -2.14
SMAD1-205ENST00000506626 COL6A5A8TX70 2615 aa1.69□□□□□ -2.14
SMAD1-205ENST00000506626 FAM208BQ5VWN6 2430 aa1.68□□□□□ -2.14
SMAD1-205ENST00000506626 JMJD1CQ15652 2540 aa1.68□□□□□ -2.14
SMAD1-205ENST00000506626 KRTAP13-4Q3LI77 160 aa1.68□□□□□ -2.14
SMAD1-205ENST00000506626 LAMA5O15230 3695 aa1.68□□□□□ -2.14
SMAD1-205ENST00000506626 USP9XQ93008 2570 aaPredicted RBP1.68□□□□□ -2.14
SMAD1-205ENST00000506626 NBPF19A0A087WUL8 3843 aa1.67□□□□□ -2.14
SMAD1-205ENST00000506626 M0QZ58 72 aa1.67□□□□□ -2.14
SMAD1-205ENST00000506626 KRTAP12-1P59990 96 aa1.67□□□□□ -2.14
SMAD1-205ENST00000506626 ZNF462Q96JM2 2506 aa1.67□□□□□ -2.14
SMAD1-205ENST00000506626 ZFYVE26Q68DK2 2539 aa1.66□□□□□ -2.14
SMAD1-205ENST00000506626 ANKRD11Q6UB99 2663 aaPredicted RBP1.66□□□□□ -2.14
SMAD1-205ENST00000506626 CRYBG3Q68DQ2 2970 aa1.66□□□□□ -2.14
SMAD1-205ENST00000506626 ASPMQ8IZT6 3477 aa1.66□□□□□ -2.14
SMAD1-205ENST00000506626 VWFP04275 2813 aa1.66□□□□□ -2.14
SMAD1-205ENST00000506626 CEP295Q9C0D2 2601 aa1.66□□□□□ -2.14
SMAD1-205ENST00000506626 CENPEQ02224 2701 aa1.65□□□□□ -2.15
SMAD1-205ENST00000506626 RPS29P62273 56 aaKnown RBP1.65□□□□□ -2.15
SMAD1-205ENST00000506626 GCN1Q92616 2671 aaKnown RBP1.65□□□□□ -2.15
SMAD1-205ENST00000506626 RELNP78509 3460 aa1.64□□□□□ -2.15
SMAD1-205ENST00000506626 MEGF8Q7Z7M0 2845 aa1.64□□□□□ -2.15
SMAD1-205ENST00000506626 DNAH1Q9P2D7 4330 aa1.64□□□□□ -2.15
SMAD1-205ENST00000506626 MTORP42345 2549 aa1.64□□□□□ -2.15
SMAD1-205ENST00000506626 MYO9AB2RTY4 2548 aa1.63□□□□□ -2.15
SMAD1-205ENST00000506626 PKD1L2Q7Z442 2459 aa1.63□□□□□ -2.15
SMAD1-205ENST00000506626 TTC28Q96AY4 2481 aa1.63□□□□□ -2.15
SMAD1-205ENST00000506626 BSNQ9UPA5 3926 aa1.63□□□□□ -2.15
SMAD1-205ENST00000506626 SRRM2Q9UQ35 2752 aaKnown RBP1.63□□□□□ -2.15
SMAD1-205ENST00000506626 CRCT1Q9UGL9 99 aa1.62□□□□□ -2.15
SMAD1-205ENST00000506626 CHD8Q9HCK8 2581 aa1.61□□□□□ -2.15
SMAD1-205ENST00000506626 TENM4Q6N022 2769 aa1.61□□□□□ -2.15
SMAD1-205ENST00000506626 NBEAL2Q6ZNJ1 2754 aa1.61□□□□□ -2.15
SMAD1-205ENST00000506626 MXRA5Q9NR99 2828 aa1.61□□□□□ -2.15
SMAD1-205ENST00000506626 VPS13DQ5THJ4 4388 aa1.6□□□□□ -2.15
SMAD1-205ENST00000506626 UNC79Q9P2D8 2635 aa1.6□□□□□ -2.15
SMAD1-205ENST00000506626 EYSQ5T1H1 3165 aa1.6□□□□□ -2.15
SMAD1-205ENST00000506626 PIEZO1Q92508 2521 aa1.6□□□□□ -2.15
SMAD1-205ENST00000506626 KRTAP13-2Q52LG2 175 aa1.6□□□□□ -2.15
SMAD1-205ENST00000506626 KRTAP4-1Q9BYQ7 146 aa1.6□□□□□ -2.15
SMAD1-205ENST00000506626 DMBT1Q9UGM3 2413 aaPredicted RBP1.6□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms