RNA–Protein interactions for RNA: ENST00000506233.5

SCLT1-207, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 3,673 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-207ENST00000506233 NUPR2A6NF83 97 aa3.43□□□□□ -1.86
SCLT1-207ENST00000506233 J3KT08 172 aa3.43□□□□□ -1.86
SCLT1-207ENST00000506233 PRLHP81277 87 aa3.43□□□□□ -1.86
SCLT1-207ENST00000506233 LINC00643Q86TS7 51 aa3.43□□□□□ -1.86
SCLT1-207ENST00000506233 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.42□□□□□ -1.86
SCLT1-207ENST00000506233 ACYP1P07311 99 aa3.42□□□□□ -1.86
SCLT1-207ENST00000506233 RPS28P62857 69 aaKnown RBP3.42□□□□□ -1.86
SCLT1-207ENST00000506233 IMUPQ9GZP8 106 aa3.42□□□□□ -1.86
SCLT1-207ENST00000506233 A6NED7 52 aa3.41□□□□□ -1.86
SCLT1-207ENST00000506233 KRTAP13-2Q52LG2 175 aa3.41□□□□□ -1.86
SCLT1-207ENST00000506233 ZNF861PO60384 105 aa3.41□□□□□ -1.86
SCLT1-207ENST00000506233 CRYGAP11844 174 aa3.41□□□□□ -1.86
SCLT1-207ENST00000506233 KRTAP13-3Q3SY46 172 aa3.41□□□□□ -1.86
SCLT1-207ENST00000506233 LINC00472Q9H8W2 130 aa3.41□□□□□ -1.86
SCLT1-207ENST00000506233 HERC1Q15751 4861 aa3.41□□□□□ -1.86
SCLT1-207ENST00000506233 KTN1-AS1Q86SY8 53 aa3.4□□□□□ -1.86
SCLT1-207ENST00000506233 PSORS1C2Q9UIG4 136 aa3.4□□□□□ -1.86
SCLT1-207ENST00000506233 MOBPQ13875 183 aa3.4□□□□□ -1.87
SCLT1-207ENST00000506233 S100A7L2Q5SY68 101 aa3.4□□□□□ -1.87
SCLT1-207ENST00000506233 Q8N9P0 234 aaPredicted RBP3.4□□□□□ -1.87
SCLT1-207ENST00000506233 SCXQ7RTU7 201 aa3.4□□□□□ -1.87
SCLT1-207ENST00000506233 Q8N9L7 120 aa3.4□□□□□ -1.87
SCLT1-207ENST00000506233 JMJD7-PLA2G4BH0Y9G9 81 aa3.39□□□□□ -1.87
SCLT1-207ENST00000506233 ANAPC11Q9NYG5 84 aa3.39□□□□□ -1.87
SCLT1-207ENST00000506233 IGKV3D-7A0A0C4DH55 119 aa3.39□□□□□ -1.87
SCLT1-207ENST00000506233 RBM3P98179 157 aaKnown RBP3.39□□□□□ -1.87
SCLT1-207ENST00000506233 A8MUU9 505 aa3.38□□□□□ -1.87
SCLT1-207ENST00000506233 HAMPP81172 84 aa3.38□□□□□ -1.87
SCLT1-207ENST00000506233 IGKV2-24A0A0C4DH68 120 aa3.38□□□□□ -1.87
SCLT1-207ENST00000506233 BCE1O60756 84 aa3.37□□□□□ -1.87
SCLT1-207ENST00000506233 KRTAP19-1Q8IUB9 90 aa3.37□□□□□ -1.87
SCLT1-207ENST00000506233 ZCCHC13Q8WW36 166 aaKnown RBP3.37□□□□□ -1.87
SCLT1-207ENST00000506233 FAM236AA0A1B0GUQ0 79 aa3.37□□□□□ -1.87
SCLT1-207ENST00000506233 FAM236BA0A1B0GV22 79 aa3.37□□□□□ -1.87
SCLT1-207ENST00000506233 FAM229BQ4G0N7 80 aa3.37□□□□□ -1.87
SCLT1-207ENST00000506233 HMCN2Q8NDA2 5059 aa3.36□□□□□ -1.87
SCLT1-207ENST00000506233 LCA10Q71F78 164 aa3.35□□□□□ -1.87
SCLT1-207ENST00000506233 K7EQZ3 153 aa3.35□□□□□ -1.87
SCLT1-207ENST00000506233 PSCAO43653 123 aa3.35□□□□□ -1.87
SCLT1-207ENST00000506233 PRR15Q8IV56 129 aa3.35□□□□□ -1.87
SCLT1-207ENST00000506233 J3QR89 54 aa3.33□□□□□ -1.88
SCLT1-207ENST00000506233 LINC01554Q52M75 96 aa3.33□□□□□ -1.88
SCLT1-207ENST00000506233 DNAL4O96015 105 aa3.33□□□□□ -1.88
SCLT1-207ENST00000506233 C1orf137Q5JT78 98 aa3.33□□□□□ -1.88
SCLT1-207ENST00000506233 DEFB105AQ8NG35 78 aa3.33□□□□□ -1.88
SCLT1-207ENST00000506233 RMI2Q96E14 147 aa3.33□□□□□ -1.88
SCLT1-207ENST00000506233 C3orf84H3BNL1 204 aa3.33□□□□□ -1.88
SCLT1-207ENST00000506233 SNCGO76070 127 aa3.32□□□□□ -1.88
SCLT1-207ENST00000506233 RPL37AP61513 92 aaKnown RBP3.32□□□□□ -1.88
SCLT1-207ENST00000506233 H7BZZ5 65 aa3.32□□□□□ -1.88
SCLT1-207ENST00000506233 DEFB116Q30KQ4 102 aa3.31□□□□□ -1.88
SCLT1-207ENST00000506233 MMP24-AS1A0A0U1RRL7 71 aa3.31□□□□□ -1.88
SCLT1-207ENST00000506233 IGLV7-43P04211 117 aa3.31□□□□□ -1.88
SCLT1-207ENST00000506233 COX7CP15954 63 aa3.31□□□□□ -1.88
SCLT1-207ENST00000506233 BRK1Q8WUW1 75 aa3.31□□□□□ -1.88
SCLT1-207ENST00000506233 H3BQ85 93 aa3.3□□□□□ -1.88
SCLT1-207ENST00000506233 C1orf134Q5TEV5 83 aa3.3□□□□□ -1.88
SCLT1-207ENST00000506233 KRTAP9-3Q9BYQ3 159 aa3.3□□□□□ -1.88
SCLT1-207ENST00000506233 ATP5EP2Q5VTU8 51 aa3.3□□□□□ -1.88
SCLT1-207ENST00000506233 Q5W150 140 aa3.29□□□□□ -1.88
SCLT1-207ENST00000506233 A0A1B0GW54 56 aa3.29□□□□□ -1.88
SCLT1-207ENST00000506233 KLKP1Q107X0 134 aa3.29□□□□□ -1.88
SCLT1-207ENST00000506233 C1orf64Q8NEQ6 169 aa3.29□□□□□ -1.88
SCLT1-207ENST00000506233 K7ERS5 55 aa3.29□□□□□ -1.88
SCLT1-207ENST00000506233 DSCR8Q96T75 97 aa3.29□□□□□ -1.88
SCLT1-207ENST00000506233 LAMTOR3Q9UHA4 124 aa3.29□□□□□ -1.88
SCLT1-207ENST00000506233 UBE2DNLQ8IWF7 75 aa3.28□□□□□ -1.88
SCLT1-207ENST00000506233 ETDCA0A1B0GVM5 59 aa3.28□□□□□ -1.88
SCLT1-207ENST00000506233 LY6G6CO95867 125 aa3.28□□□□□ -1.88
SCLT1-207ENST00000506233 PDE6GP18545 87 aa3.28□□□□□ -1.88
SCLT1-207ENST00000506233 LOC100996750A0A140TA64 210 aa3.27□□□□□ -1.89
SCLT1-207ENST00000506233 KRTAP4-6Q9BYQ5 205 aa3.27□□□□□ -1.89
SCLT1-207ENST00000506233 LINC00474Q9P2X8 69 aa3.27□□□□□ -1.89
SCLT1-207ENST00000506233 KRTAP4-5Q9BYR2 181 aa3.26□□□□□ -1.89
SCLT1-207ENST00000506233 SERP2Q8N6R1 65 aa3.26□□□□□ -1.89
SCLT1-207ENST00000506233 UQCRQO14949 82 aa3.25□□□□□ -1.89
SCLT1-207ENST00000506233 UBE2BP63146 152 aa3.25□□□□□ -1.89
SCLT1-207ENST00000506233 HIGD2AQ9BW72 106 aa3.25□□□□□ -1.89
SCLT1-207ENST00000506233 A0A087WSZ3 146 aa3.25□□□□□ -1.89
SCLT1-207ENST00000506233 SPANXA2-OT1Q8N9U9 137 aa3.25□□□□□ -1.89
SCLT1-207ENST00000506233 MT1HL1P0DM35 61 aa3.24□□□□□ -1.89
SCLT1-207ENST00000506233 DPH3Q96FX2 82 aa3.23□□□□□ -1.89
SCLT1-207ENST00000506233 ATOX1O00244 68 aa3.22□□□□□ -1.89
SCLT1-207ENST00000506233 UBL5Q9BZL1 73 aa3.22□□□□□ -1.89
SCLT1-207ENST00000506233 TRAV7A0A075B6U4 112 aa3.22□□□□□ -1.89
SCLT1-207ENST00000506233 FAT4Q6V0I7 4981 aa3.22□□□□□ -1.89
SCLT1-207ENST00000506233 FP248Q71RG6 208 aaPredicted RBP3.22□□□□□ -1.89
SCLT1-207ENST00000506233 UBR4Q5T4S7 5183 aa3.21□□□□□ -1.89
SCLT1-207ENST00000506233 FLG2Q5D862 2391 aaPredicted RBP3.21□□□□□ -1.9
SCLT1-207ENST00000506233 KRTAP10-8P60410 259 aa3.2□□□□□ -1.9
SCLT1-207ENST00000506233 NREPQ16612 68 aa3.2□□□□□ -1.9
SCLT1-207ENST00000506233 SNURFQ9Y675 71 aa3.18□□□□□ -1.9
SCLT1-207ENST00000506233 KRTAP19-2Q3LHN2 52 aa3.18□□□□□ -1.9
SCLT1-207ENST00000506233 HCG22E2RYF7 251 aa3.18□□□□□ -1.9
SCLT1-207ENST00000506233 RNF213Q63HN8 5207 aa3.18□□□□□ -1.9
SCLT1-207ENST00000506233 TMEM254Q8TBM7 123 aa3.17□□□□□ -1.9
SCLT1-207ENST00000506233 KRTAP4-12Q9BQ66 201 aa3.16□□□□□ -1.9
SCLT1-207ENST00000506233 KRTAP25-1Q3LHN0 102 aa3.16□□□□□ -1.9
SCLT1-207ENST00000506233 C20orf197Q8N268 126 aa3.15□□□□□ -1.9
SCLT1-207ENST00000506233 SMR3BP02814 79 aaPredicted RBP3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms