RNA–Protein interactions for RNA: ENST00000506104.1

SNF8-204, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 455 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-204ENST00000506104 KRTAP9-3Q9BYQ3 159 aa4.08□□□□□ -1.76
SNF8-204ENST00000506104 HRES1P13985 223 aa4.07□□□□□ -1.76
SNF8-204ENST00000506104 COA6Q5JTJ3 125 aaKnown RBP4.06□□□□□ -1.76
SNF8-204ENST00000506104 NOTCH2NLQ7Z3S9 236 aa4.06□□□□□ -1.76
SNF8-204ENST00000506104 ANKRD29Q8N6D5 301 aa4.06□□□□□ -1.76
SNF8-204ENST00000506104 FAM218AQ96MZ4 157 aa4.06□□□□□ -1.76
SNF8-204ENST00000506104 A0A1W2PNM2 257 aa4.05□□□□□ -1.76
SNF8-204ENST00000506104 H0YGX0 51 aa4.05□□□□□ -1.76
SNF8-204ENST00000506104 VPS25Q9BRG1 176 aa4.04□□□□□ -1.76
SNF8-204ENST00000506104 LYRM7Q5U5X0 104 aa4.03□□□□□ -1.76
SNF8-204ENST00000506104 TRACP01848 142 aa4.02□□□□□ -1.77
SNF8-204ENST00000506104 Q8N9P0 234 aaPredicted RBP4.02□□□□□ -1.77
SNF8-204ENST00000506104 DNAL4O96015 105 aa4.01□□□□□ -1.77
SNF8-204ENST00000506104 LCE5AQ5TCM9 118 aa4.01□□□□□ -1.77
SNF8-204ENST00000506104 HIST3H2BBQ8N257 126 aa4.01□□□□□ -1.77
SNF8-204ENST00000506104 HIST1H2BLQ99880 126 aa4.01□□□□□ -1.77
SNF8-204ENST00000506104 CCKP06307 115 aa4□□□□□ -1.77
SNF8-204ENST00000506104 COX8AP10176 69 aa4□□□□□ -1.77
SNF8-204ENST00000506104 SPINK7P58062 85 aa4□□□□□ -1.77
SNF8-204ENST00000506104 C14orf144Q96I85 54 aa4□□□□□ -1.77
SNF8-204ENST00000506104 SYNE2Q8WXH0 6885 aaKnown RBP3.99□□□□□ -1.77
SNF8-204ENST00000506104 A8MWP4 228 aa3.99□□□□□ -1.77
SNF8-204ENST00000506104 S100A6P06703 90 aa3.99□□□□□ -1.77
SNF8-204ENST00000506104 PSMB2P49721 201 aa3.99□□□□□ -1.77
SNF8-204ENST00000506104 KRTAP19-6Q3LI70 58 aa3.99□□□□□ -1.77
SNF8-204ENST00000506104 ZCCHC13Q8WW36 166 aaKnown RBP3.99□□□□□ -1.77
SNF8-204ENST00000506104 PRAC1Q96KF2 57 aa3.99□□□□□ -1.77
SNF8-204ENST00000506104 ORMDL1Q9P0S3 153 aa3.99□□□□□ -1.77
SNF8-204ENST00000506104 A0A0B4J2C4 111 aa3.98□□□□□ -1.77
SNF8-204ENST00000506104 TRBV7-4A0A0J9YYF1 115 aa3.98□□□□□ -1.77
SNF8-204ENST00000506104 WFDC13Q8IUB5 93 aa3.98□□□□□ -1.77
SNF8-204ENST00000506104 PRO1854Q9UHT4 67 aa3.98□□□□□ -1.77
SNF8-204ENST00000506104 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
SNF8-204ENST00000506104 A0A1B0GVX0 72 aa3.97□□□□□ -1.77
SNF8-204ENST00000506104 A0A1B0GX51 115 aa3.97□□□□□ -1.77
SNF8-204ENST00000506104 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
SNF8-204ENST00000506104 LINC00472Q9H8W2 130 aa3.97□□□□□ -1.77
SNF8-204ENST00000506104 KRTAP15-1Q3LI76 137 aa3.96□□□□□ -1.78
SNF8-204ENST00000506104 OCR1Q9BZK8 76 aa3.96□□□□□ -1.78
SNF8-204ENST00000506104 SPATA45Q537H7 98 aa3.95□□□□□ -1.78
SNF8-204ENST00000506104 CEND1Q8N111 149 aa3.95□□□□□ -1.78
SNF8-204ENST00000506104 KRTAP6-3Q3LI67 103 aa3.94□□□□□ -1.78
SNF8-204ENST00000506104 TMEM256-PLSCR3K7ERE1 68 aa3.93□□□□□ -1.78
SNF8-204ENST00000506104 DLEU1O43261 78 aa3.93□□□□□ -1.78
SNF8-204ENST00000506104 NDUFB1O75438 58 aa3.93□□□□□ -1.78
SNF8-204ENST00000506104 IGKV2-30P06310 120 aa3.93□□□□□ -1.78
SNF8-204ENST00000506104 HIGD1BQ9P298 99 aa3.93□□□□□ -1.78
SNF8-204ENST00000506104 H3BQ85 93 aa3.92□□□□□ -1.78
SNF8-204ENST00000506104 COX6CP09669 75 aa3.92□□□□□ -1.78
SNF8-204ENST00000506104 S100A1P23297 94 aa3.92□□□□□ -1.78
SNF8-204ENST00000506104 FXYD2P54710 66 aa3.92□□□□□ -1.78
SNF8-204ENST00000506104 DSCR8Q96T75 97 aa3.92□□□□□ -1.78
SNF8-204ENST00000506104 VAMP8Q9BV40 100 aa3.92□□□□□ -1.78
SNF8-204ENST00000506104 K7ERJ3 54 aa3.91□□□□□ -1.78
SNF8-204ENST00000506104 C2orf91Q6ZV80 131 aa3.91□□□□□ -1.78
SNF8-204ENST00000506104 J3KT08 172 aa3.9□□□□□ -1.79
SNF8-204ENST00000506104 SCGB1C2P0DMR2 95 aa3.9□□□□□ -1.79
SNF8-204ENST00000506104 RBM3P98179 157 aaKnown RBP3.9□□□□□ -1.79
SNF8-204ENST00000506104 C8orf17Q9NRJ1 99 aa3.89□□□□□ -1.79
SNF8-204ENST00000506104 IGKV3D-7A0A0C4DH55 119 aa3.88□□□□□ -1.79
SNF8-204ENST00000506104 C9JAW5 83 aa3.88□□□□□ -1.79
SNF8-204ENST00000506104 NDUFS5O43920 106 aa3.88□□□□□ -1.79
SNF8-204ENST00000506104 H1FX-AS1Q4G0G2 97 aa3.87□□□□□ -1.79
SNF8-204ENST00000506104 FAM236AA0A1B0GUQ0 79 aa3.86□□□□□ -1.79
SNF8-204ENST00000506104 FAM236BA0A1B0GV22 79 aa3.86□□□□□ -1.79
SNF8-204ENST00000506104 IGKV2D-30A0A075B6S6 120 aa3.85□□□□□ -1.79
SNF8-204ENST00000506104 V9GYY9 64 aa3.85□□□□□ -1.79
SNF8-204ENST00000506104 A6NN06 94 aa3.84□□□□□ -1.79
SNF8-204ENST00000506104 BAALC-AS2P0C853 105 aa3.84□□□□□ -1.79
SNF8-204ENST00000506104 HSD52Q0P140 79 aa3.84□□□□□ -1.79
SNF8-204ENST00000506104 Q6ZQT0 140 aa3.84□□□□□ -1.79
SNF8-204ENST00000506104 KRTAP20-1Q3LI63 56 aa3.82□□□□□ -1.8
SNF8-204ENST00000506104 MRPL34Q9BQ48 92 aaKnown RBP3.81□□□□□ -1.8
SNF8-204ENST00000506104 C5orf47Q569G3 176 aa3.8□□□□□ -1.8
SNF8-204ENST00000506104 NREPQ16612 68 aa3.79□□□□□ -1.8
SNF8-204ENST00000506104 TMEM254Q8TBM7 123 aa3.79□□□□□ -1.8
SNF8-204ENST00000506104 hDV103S1A0JD37 113 aa3.78□□□□□ -1.8
SNF8-204ENST00000506104 Q5VV11 94 aa3.78□□□□□ -1.8
SNF8-204ENST00000506104 PRR15Q8IV56 129 aa3.78□□□□□ -1.8
SNF8-204ENST00000506104 C14orf132Q9NPU4 83 aa3.78□□□□□ -1.8
SNF8-204ENST00000506104 MMP24-AS1A0A0U1RRL7 71 aa3.77□□□□□ -1.81
SNF8-204ENST00000506104 ATXN8Q156A1 80 aa3.77□□□□□ -1.81
SNF8-204ENST00000506104 C4orf26Q17RF5 130 aa3.77□□□□□ -1.81
SNF8-204ENST00000506104 C7orf65Q6ZTY9 151 aa3.77□□□□□ -1.81
SNF8-204ENST00000506104 NAA38Q9BRA0 125 aaKnown RBP3.77□□□□□ -1.81
SNF8-204ENST00000506104 IMUPQ9GZP8 106 aa3.77□□□□□ -1.81
SNF8-204ENST00000506104 JMJD7-PLA2G4BH0Y9G9 81 aa3.76□□□□□ -1.81
SNF8-204ENST00000506104 NEBP20929 6669 aa3.75□□□□□ -1.81
SNF8-204ENST00000506104 LOC110117498A0A087WWA1 95 aa3.74□□□□□ -1.81
SNF8-204ENST00000506104 K7EQZ3 153 aa3.74□□□□□ -1.81
SNF8-204ENST00000506104 UQCR10Q9UDW1 63 aa3.74□□□□□ -1.81
SNF8-204ENST00000506104 PDE6GP18545 87 aa3.73□□□□□ -1.81
SNF8-204ENST00000506104 Q5W150 140 aa3.73□□□□□ -1.81
SNF8-204ENST00000506104 S4R3F8 94 aa3.73□□□□□ -1.81
SNF8-204ENST00000506104 NDUFAF8A1L188 74 aa3.72□□□□□ -1.81
SNF8-204ENST00000506104 HCG22E2RYF7 251 aa3.72□□□□□ -1.81
SNF8-204ENST00000506104 MT1BP07438 61 aa3.72□□□□□ -1.81
SNF8-204ENST00000506104 A0A1B0GW54 56 aa3.71□□□□□ -1.82
SNF8-204ENST00000506104 BPY2O14599 106 aa3.7□□□□□ -1.82
SNF8-204ENST00000506104 CXCL6P80162 114 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms