RNA–Protein interactions for RNA: ENST00000505346.5

SMN2-205, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 3

Gene SMN2, Length 707 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-205ENST00000505346 WT1-ASQ06250 92 aa-2.12□□□□□ -2.75
SMN2-205ENST00000505346 ALKAL2Q6UX46 152 aa-2.12□□□□□ -2.75
SMN2-205ENST00000505346 ZFYVE16Q7Z3T8 1539 aa-2.12□□□□□ -2.75
SMN2-205ENST00000505346 NCOA2Q15596 1464 aa-2.13□□□□□ -2.75
SMN2-205ENST00000505346 NRXN1Q9ULB1 1477 aa-2.13□□□□□ -2.75
SMN2-205ENST00000505346 TMEM218A2RU14 115 aa-2.13□□□□□ -2.75
SMN2-205ENST00000505346 NDUFC1O43677 76 aa-2.13□□□□□ -2.75
SMN2-205ENST00000505346 S100A1P23297 94 aa-2.13□□□□□ -2.75
SMN2-205ENST00000505346 S100A12P80511 92 aa-2.13□□□□□ -2.75
SMN2-205ENST00000505346 PLIN4Q96Q06 1357 aa-2.13□□□□□ -2.75
SMN2-205ENST00000505346 KIF1AQ12756 1690 aa-2.14□□□□□ -2.75
SMN2-205ENST00000505346 CORTO00230 105 aa-2.14□□□□□ -2.75
SMN2-205ENST00000505346 GAFA1Q96PS6 74 aa-2.14□□□□□ -2.75
SMN2-205ENST00000505346 FAM135AQ9P2D6 1515 aa-2.14□□□□□ -2.75
SMN2-205ENST00000505346 EIF4G3O43432 1585 aaKnown RBP-2.15□□□□□ -2.75
SMN2-205ENST00000505346 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP-2.15□□□□□ -2.75
SMN2-205ENST00000505346 A0A1B0GV90 55 aa-2.15□□□□□ -2.75
SMN2-205ENST00000505346 D6R8Y8 96 aa-2.15□□□□□ -2.75
SMN2-205ENST00000505346 UQCRHP07919 91 aa-2.15□□□□□ -2.75
SMN2-205ENST00000505346 RPL13AP3Q6NVV1 102 aa-2.15□□□□□ -2.75
SMN2-205ENST00000505346 MUSTN1Q8IVN3 82 aa-2.15□□□□□ -2.75
SMN2-205ENST00000505346 THOC2Q8NI27 1593 aaKnown RBP-2.15□□□□□ -2.75
SMN2-205ENST00000505346 DOT1LQ8TEK3 1739 aa-2.16□□□□□ -2.75
SMN2-205ENST00000505346 DLEU1O43261 78 aa-2.16□□□□□ -2.76
SMN2-205ENST00000505346 HMGN3Q15651 99 aa-2.16□□□□□ -2.76
SMN2-205ENST00000505346 ABCC2Q92887 1545 aa-2.17□□□□□ -2.76
SMN2-205ENST00000505346 ITSN2Q9NZM3 1697 aa-2.17□□□□□ -2.76
SMN2-205ENST00000505346 RAPGEF2Q9Y4G8 1499 aa-2.17□□□□□ -2.76
SMN2-205ENST00000505346 H3BUA1 57 aa-2.17□□□□□ -2.76
SMN2-205ENST00000505346 GNGT2O14610 69 aa-2.17□□□□□ -2.76
SMN2-205ENST00000505346 LEPROTL1O95214 131 aa-2.17□□□□□ -2.76
SMN2-205ENST00000505346 HMGN1P05114 100 aa-2.17□□□□□ -2.76
SMN2-205ENST00000505346 MRPS10P82664 201 aaKnown RBP-2.18□□□□□ -2.76
SMN2-205ENST00000505346 MED14O60244 1454 aa-2.19□□□□□ -2.76
SMN2-205ENST00000505346 LRRIQ1Q96JM4 1722 aa-2.19□□□□□ -2.76
SMN2-205ENST00000505346 ANKRD36BQ8N2N9 1353 aa-2.19□□□□□ -2.76
SMN2-205ENST00000505346 IQCF6A8MYZ5 107 aa-2.19□□□□□ -2.76
SMN2-205ENST00000505346 MPC2O95563 127 aa-2.2□□□□□ -2.76
SMN2-205ENST00000505346 RPS27P42677 84 aaKnown RBP-2.2□□□□□ -2.76
SMN2-205ENST00000505346 BVES-AS1Q5T3Y7 98 aa-2.2□□□□□ -2.76
SMN2-205ENST00000505346 RPS27LQ71UM5 84 aaKnown RBP-2.2□□□□□ -2.76
SMN2-205ENST00000505346 RGPD1P0DJD0 1748 aa-2.21□□□□□ -2.76
SMN2-205ENST00000505346 HMGA1P17096 107 aaKnown RBP-2.21□□□□□ -2.76
SMN2-205ENST00000505346 GTF2H5Q6ZYL4 71 aa-2.21□□□□□ -2.76
SMN2-205ENST00000505346 MYH4Q9Y623 1939 aa-2.21□□□□□ -2.76
SMN2-205ENST00000505346 NESP48681 1621 aa-2.21□□□□□ -2.76
SMN2-205ENST00000505346 A0A1B0GUT8 65 aa-2.22□□□□□ -2.76
SMN2-205ENST00000505346 SFTA3P0C7M3 94 aa-2.22□□□□□ -2.76
SMN2-205ENST00000505346 ETDBQ3ZM63 59 aa-2.22□□□□□ -2.76
SMN2-205ENST00000505346 DEFB104AQ8WTQ1 72 aa-2.22□□□□□ -2.76
SMN2-205ENST00000505346 TMEM203Q969S6 136 aa-2.22□□□□□ -2.76
SMN2-205ENST00000505346 CLASP1Q7Z460 1538 aa-2.22□□□□□ -2.77
SMN2-205ENST00000505346 PPLO60437 1756 aa-2.23□□□□□ -2.77
SMN2-205ENST00000505346 PMCHL2Q9BQD1 86 aa-2.23□□□□□ -2.77
SMN2-205ENST00000505346 CD163L1Q9NR16 1453 aa-2.23□□□□□ -2.77
SMN2-205ENST00000505346 TRAV21A0A0B4J279 112 aa-2.24□□□□□ -2.77
SMN2-205ENST00000505346 ZNF720Q7Z2F6 126 aa-2.24□□□□□ -2.77
SMN2-205ENST00000505346 GNG8Q9UK08 70 aa-2.24□□□□□ -2.77
SMN2-205ENST00000505346 NCBP2-AS2Q69YL0 99 aa-2.25□□□□□ -2.77
SMN2-205ENST00000505346 PREX2Q70Z35 1606 aa-2.25□□□□□ -2.77
SMN2-205ENST00000505346 TJP1Q07157 1748 aa-2.26□□□□□ -2.77
SMN2-205ENST00000505346 GOLGB1Q14789 3259 aaKnown RBP-2.26□□□□□ -2.77
SMN2-205ENST00000505346 NEXMIFQ5QGS0 1516 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 KIAA0586Q9BVV6 1533 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 NWD1Q149M9 1564 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 KIF14Q15058 1648 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 ANKRD26Q9UPS8 1709 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 CYB5AP00167 134 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 CD52P31358 61 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 DEFB133Q30KQ1 61 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 UACAQ9BZF9 1416 aa-2.27□□□□□ -2.77
SMN2-205ENST00000505346 BAZ1AQ9NRL2 1556 aaPredicted RBP-2.27□□□□□ -2.77
SMN2-205ENST00000505346 MAP3K4Q9Y6R4 1608 aa-2.28□□□□□ -2.77
SMN2-205ENST00000505346 ATOX1O00244 68 aa-2.28□□□□□ -2.77
SMN2-205ENST00000505346 FCER1GP30273 86 aa-2.28□□□□□ -2.77
SMN2-205ENST00000505346 PLGLAQ15195 96 aa-2.28□□□□□ -2.77
SMN2-205ENST00000505346 MINOS1Q5TGZ0 78 aa-2.28□□□□□ -2.77
SMN2-205ENST00000505346 CLTCQ00610 1675 aaKnown RBP-2.29□□□□□ -2.78
SMN2-205ENST00000505346 DDX60LQ5H9U9 1706 aaKnown RBP-2.3□□□□□ -2.78
SMN2-205ENST00000505346 POLR2KP53803 58 aaKnown RBP-2.3□□□□□ -2.78
SMN2-205ENST00000505346 ITSN1Q15811 1721 aa-2.31□□□□□ -2.78
SMN2-205ENST00000505346 RICTORQ6R327 1708 aa-2.31□□□□□ -2.78
SMN2-205ENST00000505346 DEFB131BA0A096LNP1 70 aa-2.31□□□□□ -2.78
SMN2-205ENST00000505346 C2orf88Q9BSF0 95 aa-2.31□□□□□ -2.78
SMN2-205ENST00000505346 C6orf48Q9UBA6 75 aa-2.31□□□□□ -2.78
SMN2-205ENST00000505346 FAM208AQ9UK61 1670 aaKnown RBP-2.31□□□□□ -2.78
SMN2-205ENST00000505346 CCNB3Q8WWL7 1395 aa-2.32□□□□□ -2.78
SMN2-205ENST00000505346 S100A8P05109 93 aa-2.32□□□□□ -2.78
SMN2-205ENST00000505346 NHSQ6T4R5 1651 aa-2.33□□□□□ -2.78
SMN2-205ENST00000505346 UQCRHLA0A096LP55 91 aa-2.33□□□□□ -2.78
SMN2-205ENST00000505346 EFCAB10A6NFE3 127 aa-2.33□□□□□ -2.78
SMN2-205ENST00000505346 LINC00587B1AMM8 73 aa-2.33□□□□□ -2.78
SMN2-205ENST00000505346 NDUFB1O75438 58 aa-2.33□□□□□ -2.78
SMN2-205ENST00000505346 IFI27P40305 119 aaPredicted RBP-2.33□□□□□ -2.78
SMN2-205ENST00000505346 COL5A1-AS1Q5SY13 56 aa-2.33□□□□□ -2.78
SMN2-205ENST00000505346 C20orf78Q9BR46 151 aa-2.33□□□□□ -2.78
SMN2-205ENST00000505346 LMO7Q8WWI1 1683 aa-2.34□□□□□ -2.78
SMN2-205ENST00000505346 HTN1P15515 57 aa-2.34□□□□□ -2.78
SMN2-205ENST00000505346 ACBD7Q8N6N7 88 aa-2.34□□□□□ -2.78
SMN2-205ENST00000505346 KAAG1Q9UBP8 84 aa-2.34□□□□□ -2.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms