RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 DMXL1Q9Y485 3027 aa-0.2□□□□□ -2.44
UBE2D3-218ENST00000505009 LRRIQ1Q96JM4 1722 aa-0.2□□□□□ -2.44
UBE2D3-218ENST00000505009 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.2□□□□□ -2.44
UBE2D3-218ENST00000505009 VPS13BQ7Z7G8 4022 aa-0.2□□□□□ -2.44
UBE2D3-218ENST00000505009 NHSQ6T4R5 1651 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 ACACBO00763 2458 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 PARP4Q9UKK3 1724 aaKnown RBP-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 MYO18BQ8IUG5 2567 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 ETDCA0A1B0GVM5 59 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 MT1AP04731 61 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 MINOS1Q5TGZ0 78 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 ENHOQ6UWT2 76 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 SPRR2FQ96RM1 72 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 S4R3F8 94 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 ABCA8O94911 1581 aa-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 INO80Q9ULG1 1556 aaPredicted RBP-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 UTP20O75691 2785 aaKnown RBP-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 RNF17Q9BXT8 1623 aaKnown RBP-0.21□□□□□ -2.44
UBE2D3-218ENST00000505009 DNAH6Q9C0G6 4158 aa-0.22□□□□□ -2.44
UBE2D3-218ENST00000505009 ATXN8Q156A1 80 aa-0.22□□□□□ -2.44
UBE2D3-218ENST00000505009 DEFB110Q30KQ9 67 aa-0.22□□□□□ -2.44
UBE2D3-218ENST00000505009 GNG13Q9P2W3 67 aa-0.22□□□□□ -2.44
UBE2D3-218ENST00000505009 MYO5CQ9NQX4 1742 aa-0.22□□□□□ -2.44
UBE2D3-218ENST00000505009 NBEAQ8NFP9 2946 aa-0.22□□□□□ -2.45
UBE2D3-218ENST00000505009 CD163L1Q9NR16 1453 aa-0.22□□□□□ -2.45
UBE2D3-218ENST00000505009 DNAH9Q9NYC9 4486 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 FAM186AA6NE01 2351 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 DNAH3Q8TD57 4116 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 SCRIBQ14160 1630 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 MROH1Q8NDA8 1641 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 KIF1AQ12756 1690 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 ITSN2Q9NZM3 1697 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 CUBNO60494 3623 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 H3BUA1 57 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 KALRNO60229 2985 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 ITPR3Q14573 2671 aa-0.23□□□□□ -2.45
UBE2D3-218ENST00000505009 MGAM2Q2M2H8 2515 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 USP9YO00507 2555 aaPredicted RBP-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 PKHD1L1Q86WI1 4243 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 FCER1GP30273 86 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 CRIP1P50238 77 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 WT1-ASQ06250 92 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 DEFB114Q30KQ6 69 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 C6orf48Q9UBA6 75 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 UNC80Q8N2C7 3258 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 FAT1Q14517 4588 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 C3P01024 1663 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 TOGARAM1Q9Y4F4 1720 aa-0.24□□□□□ -2.45
UBE2D3-218ENST00000505009 DCHS1Q96JQ0 3298 aa-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 LAMA1P25391 3075 aa-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 NOP10Q9NPE3 64 aaKnown RBP-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 SMCO4Q9NRQ5 59 aa-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 DUOX2Q9NRD8 1548 aa-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 UGGT2Q9NYU1 1516 aa-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 DNMBPQ6XZF7 1577 aa-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 DNAH7Q8WXX0 4024 aa-0.25□□□□□ -2.45
UBE2D3-218ENST00000505009 IQGAP3Q86VI3 1631 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 MADDQ8WXG6 1647 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 CDC42BPGQ6DT37 1551 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 ABCC6O95255 1503 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 PDCD5O14737 125 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 KRTAP20-2Q3LI61 65 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 NCBP2-AS2Q69YL0 99 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 HILPDAQ9Y5L2 63 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 ANK3Q12955 4377 aaKnown RBP-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 CSMD1Q96PZ7 3565 aa-0.26□□□□□ -2.45
UBE2D3-218ENST00000505009 WDR87Q6ZQQ6 2873 aa-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 ABCA9Q8IUA7 1624 aa-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 DIP2AQ14689 1571 aa-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 BOD1L1Q8NFC6 3051 aa-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 MMP24-AS1A0A0U1RRL7 71 aa-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 RPS27P42677 84 aaKnown RBP-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 RPS27LQ71UM5 84 aaKnown RBP-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 MYO15AQ9UKN7 3530 aa-0.27□□□□□ -2.45
UBE2D3-218ENST00000505009 IGLV5-48A0A075B6I7 105 aa-0.28□□□□□ -2.45
UBE2D3-218ENST00000505009 TNP1P09430 55 aa-0.28□□□□□ -2.45
UBE2D3-218ENST00000505009 MT4P47944 62 aa-0.28□□□□□ -2.45
UBE2D3-218ENST00000505009 LY75O60449 1722 aa-0.28□□□□□ -2.45
UBE2D3-218ENST00000505009 EP400Q96L91 3159 aa-0.28□□□□□ -2.45
UBE2D3-218ENST00000505009 K7EMI3 77 aa-0.29□□□□□ -2.46
UBE2D3-218ENST00000505009 SFTA3P0C7M3 94 aa-0.29□□□□□ -2.46
UBE2D3-218ENST00000505009 SERF2P84101 59 aa-0.29□□□□□ -2.46
UBE2D3-218ENST00000505009 VPS13DQ5THJ4 4388 aa-0.29□□□□□ -2.46
UBE2D3-218ENST00000505009 ASXL1Q8IXJ9 1541 aa-0.29□□□□□ -2.46
UBE2D3-218ENST00000505009 CDC42BPAQ5VT25 1732 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 DNAH1Q9P2D7 4330 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 MUC17Q685J3 4493 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 DEFB1P60022 68 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 CLPSL2Q6UWE3 100 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 ABRACLQ9P1F3 81 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 APOBP04114 4563 aaKnown RBP-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 A0A1B0GUL6 1792 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 DNAH11Q96DT5 4516 aa-0.3□□□□□ -2.46
UBE2D3-218ENST00000505009 SACSQ9NZJ4 4579 aa-0.31□□□□□ -2.46
UBE2D3-218ENST00000505009 TLN2Q9Y4G6 2542 aa-0.31□□□□□ -2.46
UBE2D3-218ENST00000505009 CLASP1Q7Z460 1538 aa-0.31□□□□□ -2.46
UBE2D3-218ENST00000505009 LINC01549A6NIU2 74 aa-0.31□□□□□ -2.46
UBE2D3-218ENST00000505009 NMES1Q9C002 83 aa-0.31□□□□□ -2.46
UBE2D3-218ENST00000505009 ZFHX4Q86UP3 3567 aa-0.31□□□□□ -2.46
UBE2D3-218ENST00000505009 TIAM1Q13009 1591 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 150 ms