RNA–Protein interactions for RNA: ENST00000504875.5

CSF1R-203, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best)

Gene CSF1R, Length 3,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-203ENST00000504875 LINC00472Q9H8W2 130 aa5.89□□□□□ -1.47
CSF1R-203ENST00000504875 PLAC8Q9NZF1 115 aa5.88□□□□□ -1.47
CSF1R-203ENST00000504875 LINC00313P59037 77 aa5.88□□□□□ -1.47
CSF1R-203ENST00000504875 KRTAP13-1Q8IUC0 172 aa5.88□□□□□ -1.47
CSF1R-203ENST00000504875 IGLV7-43P04211 117 aa5.87□□□□□ -1.47
CSF1R-203ENST00000504875 WWC2-AS2Q96NR7 200 aa5.87□□□□□ -1.47
CSF1R-203ENST00000504875 KRTAP10-2P60368 255 aa5.86□□□□□ -1.47
CSF1R-203ENST00000504875 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
CSF1R-203ENST00000504875 PLECQ15149 4684 aaKnown RBP5.86□□□□□ -1.47
CSF1R-203ENST00000504875 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
CSF1R-203ENST00000504875 C8orf17Q9NRJ1 99 aa5.84□□□□□ -1.47
CSF1R-203ENST00000504875 MMP24-AS1A0A0U1RRL7 71 aa5.83□□□□□ -1.48
CSF1R-203ENST00000504875 LINC01554Q52M75 96 aa5.83□□□□□ -1.48
CSF1R-203ENST00000504875 KRTAP3-3Q9BYR6 98 aa5.83□□□□□ -1.48
CSF1R-203ENST00000504875 KRTAP3-2Q9BYR7 98 aa5.83□□□□□ -1.48
CSF1R-203ENST00000504875 A0A1B0GVX0 72 aa5.82□□□□□ -1.48
CSF1R-203ENST00000504875 KRTAP29-1A8MX34 341 aaPredicted RBP5.82□□□□□ -1.48
CSF1R-203ENST00000504875 MEGF8Q7Z7M0 2845 aa5.82□□□□□ -1.48
CSF1R-203ENST00000504875 RETNLBQ9BQ08 111 aa5.81□□□□□ -1.48
CSF1R-203ENST00000504875 H3BPC8 53 aa5.81□□□□□ -1.48
CSF1R-203ENST00000504875 LINC00483Q53H64 154 aa5.81□□□□□ -1.48
CSF1R-203ENST00000504875 PRR26Q8N8Z3 221 aa5.8□□□□□ -1.48
CSF1R-203ENST00000504875 FBN3Q75N90 2809 aa5.8□□□□□ -1.48
CSF1R-203ENST00000504875 LCE2DQ5TA82 110 aaPredicted RBP5.79□□□□□ -1.48
CSF1R-203ENST00000504875 MRPL34Q9BQ48 92 aaKnown RBP5.79□□□□□ -1.48
CSF1R-203ENST00000504875 LINC01558Q9Y6Z2 57 aa5.79□□□□□ -1.48
CSF1R-203ENST00000504875 DNAH1Q9P2D7 4330 aa5.79□□□□□ -1.48
CSF1R-203ENST00000504875 TP53AIP1Q9HCN2 124 aa5.78□□□□□ -1.48
CSF1R-203ENST00000504875 DNAH7Q8WXX0 4024 aa5.78□□□□□ -1.48
CSF1R-203ENST00000504875 IGLV7-46A0A075B6I9 117 aa5.78□□□□□ -1.48
CSF1R-203ENST00000504875 KRTAP10-1P60331 282 aa5.78□□□□□ -1.48
CSF1R-203ENST00000504875 STARD9Q9P2P6 4700 aa5.78□□□□□ -1.48
CSF1R-203ENST00000504875 PRKDCP78527 4128 aaKnown RBP5.77□□□□□ -1.49
CSF1R-203ENST00000504875 Q96NJ1 140 aa5.76□□□□□ -1.49
CSF1R-203ENST00000504875 A0A087X002 238 aa5.76□□□□□ -1.49
CSF1R-203ENST00000504875 NOTCH2NLQ7Z3S9 236 aa5.76□□□□□ -1.49
CSF1R-203ENST00000504875 SSBP3-AS1Q7Z2R9 100 aa5.76□□□□□ -1.49
CSF1R-203ENST00000504875 HRES1P13985 223 aa5.73□□□□□ -1.49
CSF1R-203ENST00000504875 PLA2G1BP04054 148 aaKnown RBP5.73□□□□□ -1.49
CSF1R-203ENST00000504875 SMR3BP02814 79 aaPredicted RBP5.73□□□□□ -1.49
CSF1R-203ENST00000504875 TYMSOSQ8TAI1 123 aa5.71□□□□□ -1.5
CSF1R-203ENST00000504875 DNHD1Q96M86 4753 aa5.71□□□□□ -1.5
CSF1R-203ENST00000504875 A0A1B0GU69 56 aa5.7□□□□□ -1.5
CSF1R-203ENST00000504875 CSAG1Q6PB30 78 aa5.7□□□□□ -1.5
CSF1R-203ENST00000504875 KMT2AQ03164 3969 aa5.69□□□□□ -1.5
CSF1R-203ENST00000504875 VPS13DQ5THJ4 4388 aa5.68□□□□□ -1.5
CSF1R-203ENST00000504875 KRTAP13-2Q52LG2 175 aa5.66□□□□□ -1.5
CSF1R-203ENST00000504875 IGKV2D-30A0A075B6S6 120 aa5.66□□□□□ -1.5
CSF1R-203ENST00000504875 IGKV2-30P06310 120 aa5.66□□□□□ -1.5
CSF1R-203ENST00000504875 MIR22HGQ0VDD5 57 aa5.64□□□□□ -1.51
CSF1R-203ENST00000504875 Q5W150 140 aa5.63□□□□□ -1.51
CSF1R-203ENST00000504875 ACYP2P14621 99 aa5.63□□□□□ -1.51
CSF1R-203ENST00000504875 DYNC2H1Q8NCM8 4307 aaKnown RBP5.63□□□□□ -1.51
CSF1R-203ENST00000504875 FAM229AH3BQW9 127 aa5.62□□□□□ -1.51
CSF1R-203ENST00000504875 Q6ZSA8 131 aa5.61□□□□□ -1.51
CSF1R-203ENST00000504875 UQCR11O14957 56 aa5.6□□□□□ -1.51
CSF1R-203ENST00000504875 LINC00304Q8N9R0 145 aa5.6□□□□□ -1.51
CSF1R-203ENST00000504875 FLG2Q5D862 2391 aaPredicted RBP5.59□□□□□ -1.51
CSF1R-203ENST00000504875 ASB16-AS1Q495Z4 193 aa5.59□□□□□ -1.51
CSF1R-203ENST00000504875 DNAH17Q9UFH2 4485 aa5.58□□□□□ -1.52
CSF1R-203ENST00000504875 DNAH11Q96DT5 4516 aa5.58□□□□□ -1.52
CSF1R-203ENST00000504875 FRAS1Q86XX4 4008 aa5.58□□□□□ -1.52
CSF1R-203ENST00000504875 DNAH2Q9P225 4427 aa5.57□□□□□ -1.52
CSF1R-203ENST00000504875 SPINK1P00995 79 aa5.57□□□□□ -1.52
CSF1R-203ENST00000504875 KRTAP1-4P0C5Y4 121 aa5.56□□□□□ -1.52
CSF1R-203ENST00000504875 DNAH8Q96JB1 4490 aa5.56□□□□□ -1.52
CSF1R-203ENST00000504875 C9orf92A6NGG3 77 aa5.56□□□□□ -1.52
CSF1R-203ENST00000504875 HECTD4Q9Y4D8 3996 aa5.54□□□□□ -1.52
CSF1R-203ENST00000504875 DNAH6Q9C0G6 4158 aa5.51□□□□□ -1.53
CSF1R-203ENST00000504875 SPATA8Q6RVD6 105 aa5.51□□□□□ -1.53
CSF1R-203ENST00000504875 KRTAP21-3Q3LHN1 58 aa5.5□□□□□ -1.53
CSF1R-203ENST00000504875 CRIPTQ9P021 101 aa5.5□□□□□ -1.53
CSF1R-203ENST00000504875 DMBT1Q9UGM3 2413 aaPredicted RBP5.5□□□□□ -1.53
CSF1R-203ENST00000504875 Q8N1X5 172 aa5.47□□□□□ -1.53
CSF1R-203ENST00000504875 LRP1BQ9NZR2 4599 aa5.46□□□□□ -1.54
CSF1R-203ENST00000504875 DNAH5Q8TE73 4624 aa5.46□□□□□ -1.54
CSF1R-203ENST00000504875 HYDINQ4G0P3 5121 aa5.45□□□□□ -1.54
CSF1R-203ENST00000504875 KRTAP13-3Q3SY46 172 aa5.44□□□□□ -1.54
CSF1R-203ENST00000504875 DMAC1Q96GE9 116 aa5.43□□□□□ -1.54
CSF1R-203ENST00000504875 KRTAP16-1A8MUX0 517 aa5.42□□□□□ -1.54
CSF1R-203ENST00000504875 ROMO1P60602 79 aa5.41□□□□□ -1.54
CSF1R-203ENST00000504875 ALMS1Q8TCU4 4167 aa5.38□□□□□ -1.55
CSF1R-203ENST00000504875 KRTAP25-1Q3LHN0 102 aa5.36□□□□□ -1.55
CSF1R-203ENST00000504875 SPINT4Q6UDR6 99 aa5.36□□□□□ -1.55
CSF1R-203ENST00000504875 VPS13BQ7Z7G8 4022 aa5.36□□□□□ -1.55
CSF1R-203ENST00000504875 A0A1B0GVY2 172 aa5.36□□□□□ -1.55
CSF1R-203ENST00000504875 RPS29P62273 56 aaKnown RBP5.34□□□□□ -1.55
CSF1R-203ENST00000504875 Q5VSD8 79 aa5.34□□□□□ -1.55
CSF1R-203ENST00000504875 FAT1Q14517 4588 aa5.33□□□□□ -1.56
CSF1R-203ENST00000504875 K7ERS5 55 aa5.32□□□□□ -1.56
CSF1R-203ENST00000504875 PKHD1P08F94 4074 aa5.32□□□□□ -1.56
CSF1R-203ENST00000504875 FAT2Q9NYQ8 4349 aa5.31□□□□□ -1.56
CSF1R-203ENST00000504875 DYNC1H1Q14204 4646 aaKnown RBP5.3□□□□□ -1.56
CSF1R-203ENST00000504875 A8MUU9 505 aa5.3□□□□□ -1.56
CSF1R-203ENST00000504875 PKD1P98161 4303 aa5.29□□□□□ -1.56
CSF1R-203ENST00000504875 SACSQ9NZJ4 4579 aa5.28□□□□□ -1.56
CSF1R-203ENST00000504875 C20orf166-AS1Q96NR2 134 aa5.25□□□□□ -1.57
CSF1R-203ENST00000504875 A0A1B0GU33 70 aa5.24□□□□□ -1.57
CSF1R-203ENST00000504875 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
CSF1R-203ENST00000504875 NDUFAF8A1L188 74 aa5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms