RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 HERC2O95714 4834 aa2.58□□□□□ -2
RFC1-208ENST00000504849 HCG22E2RYF7 251 aa2.58□□□□□ -2
RFC1-208ENST00000504849 H3BPC8 53 aa2.58□□□□□ -2
RFC1-208ENST00000504849 C1orf137Q5JT78 98 aa2.58□□□□□ -2
RFC1-208ENST00000504849 Q8N9L7 120 aa2.58□□□□□ -2
RFC1-208ENST00000504849 DEFB105AQ8NG35 78 aa2.58□□□□□ -2
RFC1-208ENST00000504849 TRRAPQ9Y4A5 3859 aa2.58□□□□□ -2
RFC1-208ENST00000504849 DEFB4AO15263 64 aa2.57□□□□□ -2
RFC1-208ENST00000504849 DEFB116Q30KQ4 102 aa2.57□□□□□ -2
RFC1-208ENST00000504849 FAM229BQ4G0N7 80 aa2.57□□□□□ -2
RFC1-208ENST00000504849 Q5W150 140 aa2.57□□□□□ -2
RFC1-208ENST00000504849 Q8NAQ8 132 aa2.57□□□□□ -2
RFC1-208ENST00000504849 TENM3Q9P273 2699 aa2.57□□□□□ -2
RFC1-208ENST00000504849 AKAP6Q13023 2319 aa2.56□□□□□ -2
RFC1-208ENST00000504849 K7ERS5 55 aa2.56□□□□□ -2
RFC1-208ENST00000504849 UBE2BP63146 152 aa2.56□□□□□ -2
RFC1-208ENST00000504849 Q6ZRX8 168 aa2.56□□□□□ -2
RFC1-208ENST00000504849 SPANXA2-OT1Q8N9U9 137 aa2.56□□□□□ -2
RFC1-208ENST00000504849 C1orf64Q8NEQ6 169 aa2.56□□□□□ -2
RFC1-208ENST00000504849 ZCCHC13Q8WW36 166 aaKnown RBP2.56□□□□□ -2
RFC1-208ENST00000504849 SPRR4Q96PI1 79 aa2.56□□□□□ -2
RFC1-208ENST00000504849 ANK3Q12955 4377 aaKnown RBP2.56□□□□□ -2
RFC1-208ENST00000504849 MUC19Q7Z5P9 8384 aa2.55□□□□□ -2
RFC1-208ENST00000504849 IGKV2D-24A0A075B6R9 120 aa2.55□□□□□ -2
RFC1-208ENST00000504849 A0A1W2PNM2 257 aa2.55□□□□□ -2
RFC1-208ENST00000504849 LINC00313P59037 77 aa2.55□□□□□ -2
RFC1-208ENST00000504849 LINC01556Q5JQF7 62 aa2.55□□□□□ -2
RFC1-208ENST00000504849 B9D2Q9BPU9 175 aa2.55□□□□□ -2
RFC1-208ENST00000504849 LIMD2Q9BT23 127 aa2.55□□□□□ -2
RFC1-208ENST00000504849 ZANQ9Y493 2812 aa2.55□□□□□ -2
RFC1-208ENST00000504849 K7EQZ3 153 aa2.54□□□□□ -2
RFC1-208ENST00000504849 PSCAO43653 123 aa2.54□□□□□ -2
RFC1-208ENST00000504849 SPRR1AP35321 89 aa2.54□□□□□ -2
RFC1-208ENST00000504849 DSCR10P59022 87 aa2.54□□□□□ -2
RFC1-208ENST00000504849 KRTAP26-1Q6PEX3 210 aa2.54□□□□□ -2
RFC1-208ENST00000504849 WFDC10BQ8IUB3 73 aa2.54□□□□□ -2
RFC1-208ENST00000504849 TRAV22A0A0B4J277 110 aa2.53□□□□□ -2
RFC1-208ENST00000504849 PANO1I0J062 215 aa2.53□□□□□ -2
RFC1-208ENST00000504849 LINC00208Q96KT6 92 aa2.53□□□□□ -2
RFC1-208ENST00000504849 Q9BRP9 147 aa2.53□□□□□ -2
RFC1-208ENST00000504849 SORL1Q92673 2214 aa2.52□□□□□ -2.01
RFC1-208ENST00000504849 H0Y9P7 68 aa2.52□□□□□ -2.01
RFC1-208ENST00000504849 CHKB-CPT1BH3BT56 60 aa2.51□□□□□ -2.01
RFC1-208ENST00000504849 RTL8CO15255 209 aa2.51□□□□□ -2.01
RFC1-208ENST00000504849 DNAH10OSP0CZ25 163 aa2.51□□□□□ -2.01
RFC1-208ENST00000504849 CASC2Q6XLA1 102 aa2.51□□□□□ -2.01
RFC1-208ENST00000504849 WFDC13Q8IUB5 93 aa2.51□□□□□ -2.01
RFC1-208ENST00000504849 ST20-AS1Q8NBB2 130 aa2.51□□□□□ -2.01
RFC1-208ENST00000504849 A0A087WSZ3 146 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 DEFB131BA0A096LNP1 70 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 LRCOL1A6NCL2 159 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 A8MUN3 132 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 A8MWP4 228 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 IGFL1Q6UW32 110 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 PRR15LQ9BU68 103 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 LINC00588Q9Y4M8 146 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 CR1P17927 2039 aa2.5□□□□□ -2.01
RFC1-208ENST00000504849 TENM2Q9NT68 2774 aa2.49□□□□□ -2.01
RFC1-208ENST00000504849 Q5VV11 94 aa2.49□□□□□ -2.01
RFC1-208ENST00000504849 ATP11AUNQ6ZP68 121 aa2.49□□□□□ -2.01
RFC1-208ENST00000504849 KTN1-AS1Q86SY8 53 aa2.49□□□□□ -2.01
RFC1-208ENST00000504849 TP53AIP1Q9HCN2 124 aa2.49□□□□□ -2.01
RFC1-208ENST00000504849 COL7A1Q02388 2944 aa2.48□□□□□ -2.01
RFC1-208ENST00000504849 A6NED7 52 aa2.48□□□□□ -2.01
RFC1-208ENST00000504849 SACSQ9NZJ4 4579 aa2.48□□□□□ -2.01
RFC1-208ENST00000504849 LOC101927531A0A1B0GV80 90 aa2.47□□□□□ -2.01
RFC1-208ENST00000504849 IGLV7-43P04211 117 aa2.47□□□□□ -2.01
RFC1-208ENST00000504849 SPRR1BP22528 89 aa2.47□□□□□ -2.01
RFC1-208ENST00000504849 MOBPQ13875 183 aa2.47□□□□□ -2.01
RFC1-208ENST00000504849 COA5Q86WW8 74 aa2.47□□□□□ -2.01
RFC1-208ENST00000504849 C9orf163Q8N9P6 203 aa2.47□□□□□ -2.01
RFC1-208ENST00000504849 CDC42SE1Q9NRR8 79 aa2.47□□□□□ -2.01
RFC1-208ENST00000504849 C16orf90A8MZG2 172 aa2.46□□□□□ -2.02
RFC1-208ENST00000504849 PRB2P02812 416 aaPredicted RBP2.46□□□□□ -2.02
RFC1-208ENST00000504849 RPL37AP61513 92 aaKnown RBP2.46□□□□□ -2.02
RFC1-208ENST00000504849 CNBPP62633 177 aaKnown RBP2.46□□□□□ -2.02
RFC1-208ENST00000504849 SPTSSBQ8NFR3 76 aa2.46□□□□□ -2.02
RFC1-208ENST00000504849 DNAH1Q9P2D7 4330 aa2.46□□□□□ -2.02
RFC1-208ENST00000504849 DYNC2H1Q8NCM8 4307 aaKnown RBP2.45□□□□□ -2.02
RFC1-208ENST00000504849 PRLHP81277 87 aa2.45□□□□□ -2.02
RFC1-208ENST00000504849 LINC00472Q9H8W2 130 aa2.45□□□□□ -2.02
RFC1-208ENST00000504849 LINC01558Q9Y6Z2 57 aa2.45□□□□□ -2.02
RFC1-208ENST00000504849 HERC1Q15751 4861 aa2.45□□□□□ -2.02
RFC1-208ENST00000504849 MMP24-AS1A0A0U1RRL7 71 aa2.44□□□□□ -2.02
RFC1-208ENST00000504849 A8MUU9 505 aa2.44□□□□□ -2.02
RFC1-208ENST00000504849 C7orf65Q6ZTY9 151 aa2.44□□□□□ -2.02
RFC1-208ENST00000504849 PHF5AQ7RTV0 110 aaKnown RBP2.44□□□□□ -2.02
RFC1-208ENST00000504849 CMYA5Q8N3K9 4069 aa2.43□□□□□ -2.02
RFC1-208ENST00000504849 A0A096LNI7 61 aa2.43□□□□□ -2.02
RFC1-208ENST00000504849 IGKV2-24A0A0C4DH68 120 aa2.43□□□□□ -2.02
RFC1-208ENST00000504849 A6NN06 94 aa2.43□□□□□ -2.02
RFC1-208ENST00000504849 KRTAP5-7Q6L8G8 165 aa2.43□□□□□ -2.02
RFC1-208ENST00000504849 ADM2Q7Z4H4 148 aa2.43□□□□□ -2.02
RFC1-208ENST00000504849 KIAA1109Q2LD37 5005 aa2.43□□□□□ -2.02
RFC1-208ENST00000504849 PCOTHQ58A44 107 aa2.42□□□□□ -2.02
RFC1-208ENST00000504849 ANAPC11Q9NYG5 84 aa2.42□□□□□ -2.02
RFC1-208ENST00000504849 A0A0G2JQZ4 141 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 A0A1W2PNN7 141 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 KRTAP1-4P0C5Y4 121 aa2.41□□□□□ -2.02
RFC1-208ENST00000504849 ASB16-AS1Q495Z4 193 aa2.41□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms