RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 C10orf91Q5T1B1 145 aa1.71□□□□□ -2.14
USP46-205ENST00000504078 LITAFQ99732 161 aa1.71□□□□□ -2.14
USP46-205ENST00000504078 SPANXDQ9BXN6 97 aa1.71□□□□□ -2.14
USP46-205ENST00000504078 SPANXCQ9NY87 97 aa1.71□□□□□ -2.14
USP46-205ENST00000504078 DPM2O94777 84 aa1.7□□□□□ -2.14
USP46-205ENST00000504078 NMUP48645 174 aa1.7□□□□□ -2.14
USP46-205ENST00000504078 RPS28P62857 69 aaKnown RBP1.7□□□□□ -2.14
USP46-205ENST00000504078 C14orf144Q96I85 54 aa1.7□□□□□ -2.14
USP46-205ENST00000504078 HSPB8Q9UJY1 196 aa1.7□□□□□ -2.14
USP46-205ENST00000504078 ZNF815PA8K554 130 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 A8MWP4 228 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 IGKCP01834 107 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 KRTAP2-3P0C7H8 128 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 FABP4P15090 132 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 SPRR2EP22531 72 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 PLNP26678 52 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 SPRR2BP35325 72 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 SPRR2AP35326 72 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 SCGB1D4Q6XE38 83 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 Q6ZQY7 126 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 KRTAP5-5Q701N2 237 aaPredicted RBP1.69□□□□□ -2.14
USP46-205ENST00000504078 WFDC13Q8IUB5 93 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 ANKRD29Q8N6D5 301 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 KRTAP2-4Q9BYR9 128 aa1.69□□□□□ -2.14
USP46-205ENST00000504078 KMT2DO14686 5537 aa1.68□□□□□ -2.14
USP46-205ENST00000504078 A0A087WSZ3 146 aa1.68□□□□□ -2.14
USP46-205ENST00000504078 TMEM218A2RU14 115 aa1.68□□□□□ -2.14
USP46-205ENST00000504078 COLCA2A8K830 154 aa1.68□□□□□ -2.14
USP46-205ENST00000504078 LEPROTL1O95214 131 aa1.68□□□□□ -2.14
USP46-205ENST00000504078 MT1BP07438 61 aa1.68□□□□□ -2.14
USP46-205ENST00000504078 SMIM11BQ8TCY0 68 aa1.68□□□□□ -2.14
USP46-205ENST00000504078 CHCHD1Q96BP2 118 aaKnown RBP1.68□□□□□ -2.14
USP46-205ENST00000504078 TRAV13-2A0A0B4J235 113 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 A0A1W2PNM2 257 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 A8MUN3 132 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 BATFQ16520 125 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 DEFB116Q30KQ4 102 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 LCE1CQ5T751 118 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 LCE1BQ5T7P3 118 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 Q6JHZ5 121 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 ANAPC13Q9BS18 74 aa1.67□□□□□ -2.14
USP46-205ENST00000504078 A0A1B0GX51 115 aa1.66□□□□□ -2.14
USP46-205ENST00000504078 C9JAW5 83 aa1.66□□□□□ -2.14
USP46-205ENST00000504078 OCIAD2Q56VL3 154 aa1.66□□□□□ -2.14
USP46-205ENST00000504078 COA6Q5JTJ3 125 aaKnown RBP1.66□□□□□ -2.14
USP46-205ENST00000504078 SPRR2FQ96RM1 72 aa1.66□□□□□ -2.14
USP46-205ENST00000504078 NHP2Q9NX24 153 aaKnown RBP1.66□□□□□ -2.14
USP46-205ENST00000504078 TRBV7-6A0A0J9YX20 115 aa1.65□□□□□ -2.15
USP46-205ENST00000504078 J3KT08 172 aa1.65□□□□□ -2.15
USP46-205ENST00000504078 TIMM17BO60830 172 aa1.65□□□□□ -2.15
USP46-205ENST00000504078 IGKV4-1P06312 121 aa1.65□□□□□ -2.15
USP46-205ENST00000504078 LINC00575Q6W349 94 aa1.65□□□□□ -2.15
USP46-205ENST00000504078 NAA38Q9BRA0 125 aaKnown RBP1.65□□□□□ -2.15
USP46-205ENST00000504078 FAM236AA0A1B0GUQ0 79 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 FAM236BA0A1B0GV22 79 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 hADV29S1A0JD25 119 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 SMIM6P0DI80 62 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 S100A2P29034 98 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 SPINK7P58062 85 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 CLLU1Q5K131 121 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 Q5VV11 94 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 ADM2Q7Z4H4 148 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 MUSTN1Q8IVN3 82 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 YPEL4Q96NS1 127 aa1.64□□□□□ -2.15
USP46-205ENST00000504078 TRGC2P03986 189 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 SCGB1C2P0DMR2 95 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 SPRR2DP22532 72 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 ATOH7Q8N100 152 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 CEND1Q8N111 149 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 ZCCHC13Q8WW36 166 aaKnown RBP1.63□□□□□ -2.15
USP46-205ENST00000504078 SNHG12Q9BXW3 62 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 KRTAP2-1Q9BYU5 128 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 IMUPQ9GZP8 106 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 C8orf17Q9NRJ1 99 aa1.63□□□□□ -2.15
USP46-205ENST00000504078 APOC3P02656 99 aa1.62□□□□□ -2.15
USP46-205ENST00000504078 A0A1B0GVX0 72 aa1.61□□□□□ -2.15
USP46-205ENST00000504078 SYS1-DBNDD2H3BUS1 97 aa1.61□□□□□ -2.15
USP46-205ENST00000504078 K7ERU9 68 aa1.61□□□□□ -2.15
USP46-205ENST00000504078 C3orf79P0CE67 100 aa1.61□□□□□ -2.15
USP46-205ENST00000504078 RBM3P98179 157 aaKnown RBP1.61□□□□□ -2.15
USP46-205ENST00000504078 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.61□□□□□ -2.15
USP46-205ENST00000504078 LCA10Q71F78 164 aa1.61□□□□□ -2.15
USP46-205ENST00000504078 TEN1Q86WV5 123 aa1.61□□□□□ -2.15
USP46-205ENST00000504078 GPR98Q8WXG9 6306 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 TAX1BP3O14907 124 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 IFITM1P13164 125 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 KRTAP12-2P59991 146 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 LYRM7Q5U5X0 104 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 LINC01545Q5VT33 79 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 KTN1-AS1Q86SY8 53 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 PRR15Q8IV56 129 aa1.6□□□□□ -2.15
USP46-205ENST00000504078 H3BMG7 143 aa1.59□□□□□ -2.15
USP46-205ENST00000504078 FABP2P12104 132 aa1.59□□□□□ -2.15
USP46-205ENST00000504078 KRTDAPP60985 99 aa1.59□□□□□ -2.15
USP46-205ENST00000504078 KRTAP19-8Q3LI54 63 aa1.59□□□□□ -2.15
USP46-205ENST00000504078 H1FX-AS1Q4G0G2 97 aa1.59□□□□□ -2.15
USP46-205ENST00000504078 LUZP6Q538Z0 58 aa1.59□□□□□ -2.15
USP46-205ENST00000504078 CAMK2N1Q7Z7J9 78 aa1.59□□□□□ -2.15
USP46-205ENST00000504078 LCE3EQ5T5B0 92 aa1.58□□□□□ -2.16
USP46-205ENST00000504078 KRTAP8-1Q8IUC2 63 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms