RNA–Protein interactions for RNA: ENST00000504003.1

ARHGEF28-206, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 4

Gene ARHGEF28, Length 539 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-206ENST00000504003 FAM236AA0A1B0GUQ0 79 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 FAM236BA0A1B0GV22 79 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 ATOX1O00244 68 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 CCKP06307 115 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 RPS28P62857 69 aaKnown RBP5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 CD164Q04900 197 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 HERC1Q15751 4861 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 IGFL1Q6UW32 110 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 PRR26Q8N8Z3 221 aa5.44□□□□□ -1.54
ARHGEF28-206ENST00000504003 COX7CP15954 63 aa5.43□□□□□ -1.54
ARHGEF28-206ENST00000504003 Q6ZQT0 140 aa5.42□□□□□ -1.54
ARHGEF28-206ENST00000504003 SPINK1P00995 79 aa5.41□□□□□ -1.54
ARHGEF28-206ENST00000504003 KRTAP13-2Q52LG2 175 aa5.41□□□□□ -1.54
ARHGEF28-206ENST00000504003 LINC00304Q8N9R0 145 aa5.41□□□□□ -1.54
ARHGEF28-206ENST00000504003 LIMD2Q9BT23 127 aa5.41□□□□□ -1.54
ARHGEF28-206ENST00000504003 J3KT08 172 aa5.4□□□□□ -1.54
ARHGEF28-206ENST00000504003 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
ARHGEF28-206ENST00000504003 KRTAP29-1A8MX34 341 aaPredicted RBP5.38□□□□□ -1.55
ARHGEF28-206ENST00000504003 RPS29P62273 56 aaKnown RBP5.38□□□□□ -1.55
ARHGEF28-206ENST00000504003 ATP5EP2Q5VTU8 51 aa5.38□□□□□ -1.55
ARHGEF28-206ENST00000504003 HRCT1Q6UXD1 115 aa5.38□□□□□ -1.55
ARHGEF28-206ENST00000504003 A0A1W2PNM2 257 aa5.37□□□□□ -1.55
ARHGEF28-206ENST00000504003 KRTAP10-8P60410 259 aa5.37□□□□□ -1.55
ARHGEF28-206ENST00000504003 TMEM258P61165 79 aa5.37□□□□□ -1.55
ARHGEF28-206ENST00000504003 SERP2Q8N6R1 65 aa5.36□□□□□ -1.55
ARHGEF28-206ENST00000504003 UBL5Q9BZL1 73 aa5.36□□□□□ -1.55
ARHGEF28-206ENST00000504003 A0A087WSZ3 146 aa5.35□□□□□ -1.55
ARHGEF28-206ENST00000504003 NREPQ16612 68 aa5.35□□□□□ -1.55
ARHGEF28-206ENST00000504003 C5orf47Q569G3 176 aa5.35□□□□□ -1.55
ARHGEF28-206ENST00000504003 A0A0G2JQZ4 141 aa5.34□□□□□ -1.55
ARHGEF28-206ENST00000504003 Q5XG85 94 aa5.34□□□□□ -1.55
ARHGEF28-206ENST00000504003 UBR4Q5T4S7 5183 aa5.33□□□□□ -1.56
ARHGEF28-206ENST00000504003 ASB16-AS1Q495Z4 193 aa5.32□□□□□ -1.56
ARHGEF28-206ENST00000504003 DMBT1Q9UGM3 2413 aaPredicted RBP5.31□□□□□ -1.56
ARHGEF28-206ENST00000504003 LINC00846Q9NV44 126 aa5.3□□□□□ -1.56
ARHGEF28-206ENST00000504003 FLG2Q5D862 2391 aaPredicted RBP5.3□□□□□ -1.56
ARHGEF28-206ENST00000504003 NDUFB1O75438 58 aa5.28□□□□□ -1.56
ARHGEF28-206ENST00000504003 MT1HL1P0DM35 61 aa5.28□□□□□ -1.56
ARHGEF28-206ENST00000504003 Q6ZVQ6 151 aa5.28□□□□□ -1.56
ARHGEF28-206ENST00000504003 BPY2O14599 106 aa5.27□□□□□ -1.57
ARHGEF28-206ENST00000504003 FAT3Q8TDW7 4589 aa5.27□□□□□ -1.57
ARHGEF28-206ENST00000504003 IGKV3D-7A0A0C4DH55 119 aa5.26□□□□□ -1.57
ARHGEF28-206ENST00000504003 IGKV4-1P06312 121 aa5.26□□□□□ -1.57
ARHGEF28-206ENST00000504003 LRP1Q07954 4544 aaKnown RBP5.25□□□□□ -1.57
ARHGEF28-206ENST00000504003 FP248Q71RG6 208 aaPredicted RBP5.25□□□□□ -1.57
ARHGEF28-206ENST00000504003 LINC00472Q9H8W2 130 aa5.25□□□□□ -1.57
ARHGEF28-206ENST00000504003 MYCBP2O75592 4640 aa5.24□□□□□ -1.57
ARHGEF28-206ENST00000504003 CXCL6P80162 114 aa5.24□□□□□ -1.57
ARHGEF28-206ENST00000504003 C1orf195Q5TG92 126 aa5.24□□□□□ -1.57
ARHGEF28-206ENST00000504003 TRAV7A0A075B6U4 112 aa5.23□□□□□ -1.57
ARHGEF28-206ENST00000504003 DEFB116Q30KQ4 102 aa5.22□□□□□ -1.57
ARHGEF28-206ENST00000504003 TNXBP22105 4242 aa5.22□□□□□ -1.57
ARHGEF28-206ENST00000504003 A0A087WVE0 104 aa5.21□□□□□ -1.58
ARHGEF28-206ENST00000504003 A8MWP4 228 aa5.21□□□□□ -1.58
ARHGEF28-206ENST00000504003 Q96NJ1 140 aa5.21□□□□□ -1.58
ARHGEF28-206ENST00000504003 CYSTM1Q9H1C7 97 aa5.21□□□□□ -1.58
ARHGEF28-206ENST00000504003 SERP1Q9Y6X1 66 aa5.21□□□□□ -1.58
ARHGEF28-206ENST00000504003 NDUFC1O43677 76 aa5.2□□□□□ -1.58
ARHGEF28-206ENST00000504003 ATP5EP56381 51 aaPredicted RBP5.2□□□□□ -1.58
ARHGEF28-206ENST00000504003 KLKP1Q107X0 134 aa5.2□□□□□ -1.58
ARHGEF28-206ENST00000504003 PRR4Q16378 134 aa5.2□□□□□ -1.58
ARHGEF28-206ENST00000504003 RETNLBQ9BQ08 111 aa5.2□□□□□ -1.58
ARHGEF28-206ENST00000504003 FAM236DA0A1B0GTK5 79 aa5.19□□□□□ -1.58
ARHGEF28-206ENST00000504003 FAM236CP0DP71 79 aa5.19□□□□□ -1.58
ARHGEF28-206ENST00000504003 IGLV7-46A0A075B6I9 117 aa5.18□□□□□ -1.58
ARHGEF28-206ENST00000504003 C8orf87E5RJ46 101 aa5.18□□□□□ -1.58
ARHGEF28-206ENST00000504003 IGHV6-1A0A0B4J1U7 121 aa5.17□□□□□ -1.58
ARHGEF28-206ENST00000504003 A0A1B0GVX0 72 aa5.17□□□□□ -1.58
ARHGEF28-206ENST00000504003 PRR15Q8IV56 129 aa5.17□□□□□ -1.58
ARHGEF28-206ENST00000504003 H7BZZ5 65 aa5.16□□□□□ -1.58
ARHGEF28-206ENST00000504003 DSCR10P59022 87 aa5.16□□□□□ -1.58
ARHGEF28-206ENST00000504003 LINC00313P59037 77 aa5.16□□□□□ -1.58
ARHGEF28-206ENST00000504003 K7EQZ3 153 aa5.15□□□□□ -1.59
ARHGEF28-206ENST00000504003 C20orf197Q8N268 126 aa5.15□□□□□ -1.59
ARHGEF28-206ENST00000504003 SMIM26A0A096LP01 95 aa5.13□□□□□ -1.59
ARHGEF28-206ENST00000504003 C8orf17Q9NRJ1 99 aa5.13□□□□□ -1.59
ARHGEF28-206ENST00000504003 HCG22E2RYF7 251 aa5.12□□□□□ -1.59
ARHGEF28-206ENST00000504003 C4orf26Q17RF5 130 aa5.12□□□□□ -1.59
ARHGEF28-206ENST00000504003 Q8N9L7 120 aa5.12□□□□□ -1.59
ARHGEF28-206ENST00000504003 hDV103S1A0JD37 113 aa5.11□□□□□ -1.59
ARHGEF28-206ENST00000504003 TPRXLQ17RH7 258 aa5.11□□□□□ -1.59
ARHGEF28-206ENST00000504003 CASC2Q6XLA1 102 aa5.11□□□□□ -1.59
ARHGEF28-206ENST00000504003 Q8N9P0 234 aaPredicted RBP5.11□□□□□ -1.59
ARHGEF28-206ENST00000504003 C9orf92A6NGG3 77 aa5.1□□□□□ -1.59
ARHGEF28-206ENST00000504003 TMEM254Q8TBM7 123 aa5.1□□□□□ -1.59
ARHGEF28-206ENST00000504003 PRO0628Q9UI54 55 aa5.1□□□□□ -1.59
ARHGEF28-206ENST00000504003 LCE1AQ5T7P2 110 aa5.09□□□□□ -1.59
ARHGEF28-206ENST00000504003 MMP24-AS1A0A0U1RRL7 71 aa5.08□□□□□ -1.6
ARHGEF28-206ENST00000504003 WFDC13Q8IUB5 93 aa5.08□□□□□ -1.6
ARHGEF28-206ENST00000504003 MRPL34Q9BQ48 92 aaKnown RBP5.08□□□□□ -1.6
ARHGEF28-206ENST00000504003 NDUFS5O43920 106 aa5.07□□□□□ -1.6
ARHGEF28-206ENST00000504003 KRTAP13-3Q3SY46 172 aa5.07□□□□□ -1.6
ARHGEF28-206ENST00000504003 HMCN2Q8NDA2 5059 aa5.06□□□□□ -1.6
ARHGEF28-206ENST00000504003 TP53AIP1Q9HCN2 124 aa5.05□□□□□ -1.6
ARHGEF28-206ENST00000504003 A0A0U1RQV1 116 aa5.04□□□□□ -1.6
ARHGEF28-206ENST00000504003 OCR1Q9BZK8 76 aa5.04□□□□□ -1.6
ARHGEF28-206ENST00000504003 ATP11AUNQ6ZP68 121 aa5.03□□□□□ -1.6
ARHGEF28-206ENST00000504003 Q75L30 129 aa5.03□□□□□ -1.6
ARHGEF28-206ENST00000504003 NOTCH2NLQ7Z3S9 236 aa5.03□□□□□ -1.6
ARHGEF28-206ENST00000504003 SNURFQ9Y675 71 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms