RNA–Protein interactions for RNA: ENST00000503842.5

PRDM2-213, Transcript of PR/SET domain 2, humanhuman

TSL 1 (best) BASIC

Gene PRDM2, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-213ENST00000503842 A0A087WSZ3 146 aa7.64□□□□□ -1.19
PRDM2-213ENST00000503842 Q5XG85 94 aa7.64□□□□□ -1.19
PRDM2-213ENST00000503842 KRTAP4-2Q9BYR5 136 aa7.62□□□□□ -1.19
PRDM2-213ENST00000503842 LIMD2Q9BT23 127 aa7.61□□□□□ -1.19
PRDM2-213ENST00000503842 FAM240AA0A1B0GVK7 77 aa7.6□□□□□ -1.19
PRDM2-213ENST00000503842 ASB16-AS1Q495Z4 193 aa7.6□□□□□ -1.19
PRDM2-213ENST00000503842 SS18L2Q9UHA2 77 aa7.6□□□□□ -1.19
PRDM2-213ENST00000503842 J3QR89 54 aa7.58□□□□□ -1.2
PRDM2-213ENST00000503842 LINC00846Q9NV44 126 aa7.58□□□□□ -1.2
PRDM2-213ENST00000503842 ACYP1P07311 99 aa7.57□□□□□ -1.2
PRDM2-213ENST00000503842 Q96NJ1 140 aa7.55□□□□□ -1.2
PRDM2-213ENST00000503842 C1orf195Q5TG92 126 aa7.54□□□□□ -1.2
PRDM2-213ENST00000503842 LINC00472Q9H8W2 130 aa7.54□□□□□ -1.2
PRDM2-213ENST00000503842 K7ERU9 68 aa7.53□□□□□ -1.2
PRDM2-213ENST00000503842 NREPQ16612 68 aa7.53□□□□□ -1.2
PRDM2-213ENST00000503842 KRTAP15-1Q3LI76 137 aa7.53□□□□□ -1.2
PRDM2-213ENST00000503842 Q6ZVQ6 151 aa7.53□□□□□ -1.2
PRDM2-213ENST00000503842 UBL5Q9BZL1 73 aa7.52□□□□□ -1.21
PRDM2-213ENST00000503842 RETNLBQ9BQ08 111 aa7.5□□□□□ -1.21
PRDM2-213ENST00000503842 DEFB116Q30KQ4 102 aa7.48□□□□□ -1.21
PRDM2-213ENST00000503842 J3KT08 172 aa7.47□□□□□ -1.21
PRDM2-213ENST00000503842 IGKV4-1P06312 121 aa7.46□□□□□ -1.22
PRDM2-213ENST00000503842 FP248Q71RG6 208 aaPredicted RBP7.46□□□□□ -1.22
PRDM2-213ENST00000503842 BPY2O14599 106 aa7.45□□□□□ -1.22
PRDM2-213ENST00000503842 SIGMAR1Q99720 223 aa7.45□□□□□ -1.22
PRDM2-213ENST00000503842 DSCR10P59022 87 aa7.43□□□□□ -1.22
PRDM2-213ENST00000503842 LINC00643Q86TS7 51 aa7.43□□□□□ -1.22
PRDM2-213ENST00000503842 A8MWP4 228 aa7.41□□□□□ -1.22
PRDM2-213ENST00000503842 CXCL6P80162 114 aa7.41□□□□□ -1.22
PRDM2-213ENST00000503842 ATP5EP2Q5VTU8 51 aa7.41□□□□□ -1.22
PRDM2-213ENST00000503842 HERC1Q15751 4861 aa7.41□□□□□ -1.22
PRDM2-213ENST00000503842 IGLV7-46A0A075B6I9 117 aa7.4□□□□□ -1.22
PRDM2-213ENST00000503842 IGKV3D-7A0A0C4DH55 119 aa7.4□□□□□ -1.22
PRDM2-213ENST00000503842 PRR4Q16378 134 aa7.4□□□□□ -1.22
PRDM2-213ENST00000503842 A0A1B0GVX0 72 aa7.38□□□□□ -1.23
PRDM2-213ENST00000503842 PRR15Q8IV56 129 aa7.38□□□□□ -1.23
PRDM2-213ENST00000503842 K7EQZ3 153 aa7.37□□□□□ -1.23
PRDM2-213ENST00000503842 NDUFB1O75438 58 aa7.37□□□□□ -1.23
PRDM2-213ENST00000503842 Q8N9L7 120 aa7.36□□□□□ -1.23
PRDM2-213ENST00000503842 IGHV6-1A0A0B4J1U7 121 aa7.35□□□□□ -1.23
PRDM2-213ENST00000503842 HMCN2Q8NDA2 5059 aa7.34□□□□□ -1.23
PRDM2-213ENST00000503842 KRTAP13-3Q3SY46 172 aa7.34□□□□□ -1.23
PRDM2-213ENST00000503842 C8orf87E5RJ46 101 aa7.33□□□□□ -1.24
PRDM2-213ENST00000503842 NOTCH2NLQ7Z3S9 236 aa7.33□□□□□ -1.24
PRDM2-213ENST00000503842 TPRXLQ17RH7 258 aa7.32□□□□□ -1.24
PRDM2-213ENST00000503842 C8orf17Q9NRJ1 99 aa7.32□□□□□ -1.24
PRDM2-213ENST00000503842 MT-ATP8P03928 68 aa7.31□□□□□ -1.24
PRDM2-213ENST00000503842 MMP24-AS1A0A0U1RRL7 71 aa7.3□□□□□ -1.24
PRDM2-213ENST00000503842 C9orf92A6NGG3 77 aa7.3□□□□□ -1.24
PRDM2-213ENST00000503842 LINC00313P59037 77 aa7.3□□□□□ -1.24
PRDM2-213ENST00000503842 KRTAP16-1A8MUX0 517 aa7.28□□□□□ -1.24
PRDM2-213ENST00000503842 HIST1H4AP62805 103 aaKnown RBP7.27□□□□□ -1.25
PRDM2-213ENST00000503842 IMUPQ9GZP8 106 aa7.26□□□□□ -1.25
PRDM2-213ENST00000503842 HCG22E2RYF7 251 aa7.25□□□□□ -1.25
PRDM2-213ENST00000503842 LPAP08519 4548 aa7.25□□□□□ -1.25
PRDM2-213ENST00000503842 A0A087WVE0 104 aa7.24□□□□□ -1.25
PRDM2-213ENST00000503842 hDV103S1A0JD37 113 aa7.24□□□□□ -1.25
PRDM2-213ENST00000503842 TMEM254Q8TBM7 123 aa7.24□□□□□ -1.25
PRDM2-213ENST00000503842 CASC2Q6XLA1 102 aa7.23□□□□□ -1.25
PRDM2-213ENST00000503842 WFDC13Q8IUB5 93 aa7.23□□□□□ -1.25
PRDM2-213ENST00000503842 C20orf166-AS1Q96NR2 134 aa7.21□□□□□ -1.26
PRDM2-213ENST00000503842 MRPL34Q9BQ48 92 aaKnown RBP7.21□□□□□ -1.26
PRDM2-213ENST00000503842 LRP2P98164 4655 aa7.21□□□□□ -1.26
PRDM2-213ENST00000503842 A8MUU9 505 aa7.2□□□□□ -1.26
PRDM2-213ENST00000503842 Q8N9P0 234 aaPredicted RBP7.2□□□□□ -1.26
PRDM2-213ENST00000503842 Q75L30 129 aa7.19□□□□□ -1.26
PRDM2-213ENST00000503842 RPL37P61927 97 aaKnown RBP7.17□□□□□ -1.26
PRDM2-213ENST00000503842 SVIPQ8NHG7 77 aa7.16□□□□□ -1.26
PRDM2-213ENST00000503842 MUC17Q685J3 4493 aa7.14□□□□□ -1.27
PRDM2-213ENST00000503842 FAM236AA0A1B0GUQ0 79 aa7.11□□□□□ -1.27
PRDM2-213ENST00000503842 FAM236BA0A1B0GV22 79 aa7.11□□□□□ -1.27
PRDM2-213ENST00000503842 NDUFS5O43920 106 aa7.11□□□□□ -1.27
PRDM2-213ENST00000503842 ZCCHC13Q8WW36 166 aaKnown RBP7.07□□□□□ -1.28
PRDM2-213ENST00000503842 OCR1Q9BZK8 76 aa7.07□□□□□ -1.28
PRDM2-213ENST00000503842 TP53AIP1Q9HCN2 124 aa7.07□□□□□ -1.28
PRDM2-213ENST00000503842 SCGB1A1P11684 91 aa7.06□□□□□ -1.28
PRDM2-213ENST00000503842 SEC61BP60468 96 aaKnown RBP7.06□□□□□ -1.28
PRDM2-213ENST00000503842 PCOTHQ58A44 107 aa7.06□□□□□ -1.28
PRDM2-213ENST00000503842 ATP11AUNQ6ZP68 121 aa7.06□□□□□ -1.28
PRDM2-213ENST00000503842 Q5W150 140 aa7.05□□□□□ -1.28
PRDM2-213ENST00000503842 UQCRQO14949 82 aa7.03□□□□□ -1.28
PRDM2-213ENST00000503842 ATOX1O00244 68 aa7.02□□□□□ -1.29
PRDM2-213ENST00000503842 UBR4Q5T4S7 5183 aa7.01□□□□□ -1.29
PRDM2-213ENST00000503842 SMIM20Q8N5G0 67 aa7□□□□□ -1.29
PRDM2-213ENST00000503842 TRAV7A0A075B6U4 112 aa6.98□□□□□ -1.29
PRDM2-213ENST00000503842 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
PRDM2-213ENST00000503842 RNF213Q63HN8 5207 aa6.98□□□□□ -1.29
PRDM2-213ENST00000503842 H0Y9P7 68 aa6.95□□□□□ -1.3
PRDM2-213ENST00000503842 KRTAP4-1Q9BYQ7 146 aa6.95□□□□□ -1.3
PRDM2-213ENST00000503842 C5orf47Q569G3 176 aa6.94□□□□□ -1.3
PRDM2-213ENST00000503842 SERP2Q8N6R1 65 aa6.93□□□□□ -1.3
PRDM2-213ENST00000503842 IGKV2-30P06310 120 aa6.92□□□□□ -1.3
PRDM2-213ENST00000503842 MP68P56378 58 aa6.91□□□□□ -1.3
PRDM2-213ENST00000503842 SPINK7P58062 85 aa6.91□□□□□ -1.3
PRDM2-213ENST00000503842 IGKV2D-30A0A075B6S6 120 aa6.9□□□□□ -1.3
PRDM2-213ENST00000503842 LOC101927531A0A1B0GV80 90 aa6.89□□□□□ -1.31
PRDM2-213ENST00000503842 H3BPC8 53 aa6.89□□□□□ -1.31
PRDM2-213ENST00000503842 PCP4P48539 62 aa6.89□□□□□ -1.31
PRDM2-213ENST00000503842 C7orf65Q6ZTY9 151 aa6.89□□□□□ -1.31
PRDM2-213ENST00000503842 C1orf64Q8NEQ6 169 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 1684.5 ms