RNA–Protein interactions for RNA: ENST00000503208.1

LINC00616-201, long intergenic non-protein coding RNA 616, humanhuman

TSL 5

Gene LINC00616, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00616-201ENST00000503208 PLCE1Q9P212 2302 aa0.96□□□□□ -2.26
LINC00616-201ENST00000503208 COL7A1Q02388 2944 aa0.96□□□□□ -2.26
LINC00616-201ENST00000503208 TRBV7-4A0A0J9YYF1 115 aa0.95□□□□□ -2.26
LINC00616-201ENST00000503208 DEFB124Q8NES8 71 aa0.95□□□□□ -2.26
LINC00616-201ENST00000503208 C18orf32Q8TCD1 76 aa0.95□□□□□ -2.26
LINC00616-201ENST00000503208 CNFNQ9BYD5 112 aa0.95□□□□□ -2.26
LINC00616-201ENST00000503208 ANKRD36A6QL64 1941 aa0.95□□□□□ -2.26
LINC00616-201ENST00000503208 DUOX1Q9NRD9 1551 aa0.95□□□□□ -2.26
LINC00616-201ENST00000503208 LYSTQ99698 3801 aa0.95□□□□□ -2.26
LINC00616-201ENST00000503208 SSPOA2VEC9 5147 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 STAB2Q8WWQ8 2551 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 DEFB112Q30KQ8 113 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 KRTAP20-1Q3LI63 56 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 SMCO4Q9NRQ5 59 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 PRO0255Q9UI72 69 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 ANKARQ7Z5J8 1434 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 GPR98Q8WXG9 6306 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 PKHD1P08F94 4074 aa0.94□□□□□ -2.26
LINC00616-201ENST00000503208 HMCN2Q8NDA2 5059 aa0.93□□□□□ -2.26
LINC00616-201ENST00000503208 ARFGEF2Q9Y6D5 1785 aa0.93□□□□□ -2.26
LINC00616-201ENST00000503208 I3L2K1 104 aa0.93□□□□□ -2.26
LINC00616-201ENST00000503208 DEFA5Q01523 94 aa0.93□□□□□ -2.26
LINC00616-201ENST00000503208 PIGYQ3MUY2 71 aa0.93□□□□□ -2.26
LINC00616-201ENST00000503208 ANK3Q12955 4377 aaKnown RBP0.93□□□□□ -2.26
LINC00616-201ENST00000503208 FXYD6-FXYD2A0A087WZ82 144 aa0.92□□□□□ -2.26
LINC00616-201ENST00000503208 CFDP00746 253 aaPredicted RBP0.92□□□□□ -2.26
LINC00616-201ENST00000503208 SMIM13P0DJ93 91 aa0.92□□□□□ -2.26
LINC00616-201ENST00000503208 PRB3Q04118 309 aaPredicted RBP0.91□□□□□ -2.26
LINC00616-201ENST00000503208 DEFB121Q5J5C9 76 aa0.91□□□□□ -2.26
LINC00616-201ENST00000503208 A0A087WXM4 84 aa0.9□□□□□ -2.27
LINC00616-201ENST00000503208 TRAV21A0A0B4J279 112 aa0.9□□□□□ -2.27
LINC00616-201ENST00000503208 PDCD5O14737 125 aa0.9□□□□□ -2.27
LINC00616-201ENST00000503208 Q8IZM0 81 aa0.9□□□□□ -2.27
LINC00616-201ENST00000503208 GAFA1Q96PS6 74 aa0.9□□□□□ -2.27
LINC00616-201ENST00000503208 KNL1Q8NG31 2342 aa0.9□□□□□ -2.27
LINC00616-201ENST00000503208 AHNAK2Q8IVF2 5795 aa0.89□□□□□ -2.27
LINC00616-201ENST00000503208 A0A1B0GUL6 1792 aa0.89□□□□□ -2.27
LINC00616-201ENST00000503208 NEBP20929 6669 aa0.89□□□□□ -2.27
LINC00616-201ENST00000503208 ATP5EP2Q5VTU8 51 aa0.89□□□□□ -2.27
LINC00616-201ENST00000503208 WFDC9Q8NEX5 89 aa0.89□□□□□ -2.27
LINC00616-201ENST00000503208 KIF20BQ96Q89 1820 aa0.89□□□□□ -2.27
LINC00616-201ENST00000503208 KMT2DO14686 5537 aa0.89□□□□□ -2.27
LINC00616-201ENST00000503208 HSPG2P98160 4391 aa0.88□□□□□ -2.27
LINC00616-201ENST00000503208 CRIPTQ9P021 101 aa0.88□□□□□ -2.27
LINC00616-201ENST00000503208 USF3Q68DE3 2245 aa0.88□□□□□ -2.27
LINC00616-201ENST00000503208 RGPD2P0DJD1 1756 aa0.87□□□□□ -2.27
LINC00616-201ENST00000503208 DNAH7Q8WXX0 4024 aa0.87□□□□□ -2.27
LINC00616-201ENST00000503208 NFAT5O94916 1531 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 SPTY2D1-AS1A0A0U1RR47 76 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 UMAD1C9J7I0 102 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 K7EQZ3 153 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 NDUFB1O75438 58 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 COX7BP24311 80 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 IFI27P40305 119 aaPredicted RBP0.86□□□□□ -2.27
LINC00616-201ENST00000503208 LELP1Q5T871 98 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 ANKRD50Q9ULJ7 1429 aa0.86□□□□□ -2.27
LINC00616-201ENST00000503208 MYCBP2O75592 4640 aa0.85□□□□□ -2.27
LINC00616-201ENST00000503208 SYNE2Q8WXH0 6885 aaKnown RBP0.85□□□□□ -2.27
LINC00616-201ENST00000503208 IFI6P09912 130 aa0.85□□□□□ -2.27
LINC00616-201ENST00000503208 USMG5Q96IX5 58 aa0.85□□□□□ -2.27
LINC00616-201ENST00000503208 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
LINC00616-201ENST00000503208 MUC12Q9UKN1 5478 aa0.85□□□□□ -2.27
LINC00616-201ENST00000503208 WNK2Q9Y3S1 2297 aa0.85□□□□□ -2.27
LINC00616-201ENST00000503208 DNAH9Q9NYC9 4486 aa0.85□□□□□ -2.27
LINC00616-201ENST00000503208 FAT2Q9NYQ8 4349 aa0.84□□□□□ -2.27
LINC00616-201ENST00000503208 LRP2P98164 4655 aa0.84□□□□□ -2.27
LINC00616-201ENST00000503208 Q5BKY6 102 aa0.84□□□□□ -2.27
LINC00616-201ENST00000503208 CD163L1Q9NR16 1453 aa0.84□□□□□ -2.28
LINC00616-201ENST00000503208 MACF1Q9UPN3 7388 aaKnown RBP0.84□□□□□ -2.28
LINC00616-201ENST00000503208 LCE6AA0A183 80 aa0.83□□□□□ -2.28
LINC00616-201ENST00000503208 H3BVH4 76 aa0.83□□□□□ -2.28
LINC00616-201ENST00000503208 I3L3M4 83 aa0.83□□□□□ -2.28
LINC00616-201ENST00000503208 COX6B1P14854 86 aa0.83□□□□□ -2.28
LINC00616-201ENST00000503208 FAT1Q14517 4588 aa0.83□□□□□ -2.28
LINC00616-201ENST00000503208 HEPN1Q6WQI6 88 aa0.82□□□□□ -2.28
LINC00616-201ENST00000503208 DYNC1H1Q14204 4646 aaKnown RBP0.82□□□□□ -2.28
LINC00616-201ENST00000503208 HUWE1Q7Z6Z7 4374 aaKnown RBP0.82□□□□□ -2.28
LINC00616-201ENST00000503208 CPSF4LA6NMK7 179 aaKnown RBP0.81□□□□□ -2.28
LINC00616-201ENST00000503208 COX8AP10176 69 aa0.81□□□□□ -2.28
LINC00616-201ENST00000503208 NREPQ16612 68 aa0.81□□□□□ -2.28
LINC00616-201ENST00000503208 STARD9Q9P2P6 4700 aa0.81□□□□□ -2.28
LINC00616-201ENST00000503208 USH2AO75445 5202 aa0.81□□□□□ -2.28
LINC00616-201ENST00000503208 PKHD1L1Q86WI1 4243 aa0.8□□□□□ -2.28
LINC00616-201ENST00000503208 SMIM31A0A1B0GVY4 71 aa0.8□□□□□ -2.28
LINC00616-201ENST00000503208 RPL38P63173 70 aaKnown RBP0.8□□□□□ -2.28
LINC00616-201ENST00000503208 HILPDAQ9Y5L2 63 aa0.8□□□□□ -2.28
LINC00616-201ENST00000503208 PKD1P98161 4303 aa0.8□□□□□ -2.28
LINC00616-201ENST00000503208 KRTAP19-3Q7Z4W3 81 aa0.79□□□□□ -2.28
LINC00616-201ENST00000503208 PLECQ15149 4684 aaKnown RBP0.79□□□□□ -2.28
LINC00616-201ENST00000503208 DNAH10Q8IVF4 4471 aa0.79□□□□□ -2.28
LINC00616-201ENST00000503208 SPRR1BP22528 89 aa0.78□□□□□ -2.28
LINC00616-201ENST00000503208 Q5VSD8 79 aa0.78□□□□□ -2.28
LINC00616-201ENST00000503208 KRTAP5-10Q6L8G5 202 aa0.78□□□□□ -2.28
LINC00616-201ENST00000503208 MRPL34Q9BQ48 92 aaKnown RBP0.78□□□□□ -2.28
LINC00616-201ENST00000503208 TNCP24821 2201 aa0.78□□□□□ -2.28
LINC00616-201ENST00000503208 LRP1BQ9NZR2 4599 aa0.78□□□□□ -2.28
LINC00616-201ENST00000503208 ALMS1Q8TCU4 4167 aa0.77□□□□□ -2.29
LINC00616-201ENST00000503208 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
LINC00616-201ENST00000503208 HMGA1P17096 107 aaKnown RBP0.77□□□□□ -2.29
LINC00616-201ENST00000503208 SPRR1AP35321 89 aa0.77□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms