RNA–Protein interactions for RNA: ENST00000502315.1

SH3RF1-202, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 4

Gene SH3RF1, Length 487 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-202ENST00000502315 MTURNQ8N3F0 131 aa3.7□□□□□ -1.82
SH3RF1-202ENST00000502315 C20orf166-AS1Q96NR2 134 aa3.7□□□□□ -1.82
SH3RF1-202ENST00000502315 LYRM7Q5U5X0 104 aa3.69□□□□□ -1.82
SH3RF1-202ENST00000502315 OBSCN-AS1Q96MR7 158 aa3.69□□□□□ -1.82
SH3RF1-202ENST00000502315 A0A0G2JQZ4 141 aa3.68□□□□□ -1.82
SH3RF1-202ENST00000502315 A8MUU9 505 aa3.68□□□□□ -1.82
SH3RF1-202ENST00000502315 H3BMG7 143 aa3.68□□□□□ -1.82
SH3RF1-202ENST00000502315 TEN1Q86WV5 123 aa3.68□□□□□ -1.82
SH3RF1-202ENST00000502315 ATXN8Q156A1 80 aa3.67□□□□□ -1.82
SH3RF1-202ENST00000502315 FAM218AQ96MZ4 157 aa3.67□□□□□ -1.82
SH3RF1-202ENST00000502315 Q96NJ1 140 aa3.67□□□□□ -1.82
SH3RF1-202ENST00000502315 PRO0461Q9UI25 63 aa3.67□□□□□ -1.82
SH3RF1-202ENST00000502315 H0YGX0 51 aa3.66□□□□□ -1.82
SH3RF1-202ENST00000502315 COX6CP09669 75 aa3.66□□□□□ -1.82
SH3RF1-202ENST00000502315 A0A1B0GX51 115 aa3.65□□□□□ -1.83
SH3RF1-202ENST00000502315 C9JAW5 83 aa3.65□□□□□ -1.83
SH3RF1-202ENST00000502315 H3BQ85 93 aa3.64□□□□□ -1.83
SH3RF1-202ENST00000502315 LINC00846Q9NV44 126 aa3.64□□□□□ -1.83
SH3RF1-202ENST00000502315 RBM12B-AS1Q9P1G2 102 aa3.63□□□□□ -1.83
SH3RF1-202ENST00000502315 F8W1H4 67 aa3.62□□□□□ -1.83
SH3RF1-202ENST00000502315 TRACP01848 142 aa3.62□□□□□ -1.83
SH3RF1-202ENST00000502315 NDUFV3P56181 108 aaKnown RBP3.62□□□□□ -1.83
SH3RF1-202ENST00000502315 ETDBQ3ZM63 59 aa3.62□□□□□ -1.83
SH3RF1-202ENST00000502315 LINC00313P59037 77 aa3.61□□□□□ -1.83
SH3RF1-202ENST00000502315 ANKRD29Q8N6D5 301 aa3.61□□□□□ -1.83
SH3RF1-202ENST00000502315 MPLKIPQ8TAP9 179 aa3.61□□□□□ -1.83
SH3RF1-202ENST00000502315 H3BT86 120 aa3.6□□□□□ -1.83
SH3RF1-202ENST00000502315 DNAL4O96015 105 aa3.6□□□□□ -1.83
SH3RF1-202ENST00000502315 A0A087WSZ3 146 aa3.59□□□□□ -1.83
SH3RF1-202ENST00000502315 TRBV7-4A0A0J9YYF1 115 aa3.59□□□□□ -1.83
SH3RF1-202ENST00000502315 BAALC-AS2P0C853 105 aa3.59□□□□□ -1.83
SH3RF1-202ENST00000502315 FAM236DA0A1B0GTK5 79 aa3.58□□□□□ -1.84
SH3RF1-202ENST00000502315 FAM236CP0DP71 79 aa3.58□□□□□ -1.84
SH3RF1-202ENST00000502315 C21orf62-AS1Q17RA5 79 aa3.58□□□□□ -1.84
SH3RF1-202ENST00000502315 ORMDL1Q9P0S3 153 aa3.58□□□□□ -1.84
SH3RF1-202ENST00000502315 A0A1B0GV72 72 aa3.57□□□□□ -1.84
SH3RF1-202ENST00000502315 MT2AP02795 61 aa3.57□□□□□ -1.84
SH3RF1-202ENST00000502315 TMEM256-PLSCR3K7ERE1 68 aa3.56□□□□□ -1.84
SH3RF1-202ENST00000502315 USH2AO75445 5202 aa3.56□□□□□ -1.84
SH3RF1-202ENST00000502315 KRTAP16-1A8MUX0 517 aa3.55□□□□□ -1.84
SH3RF1-202ENST00000502315 C8orf87E5RJ46 101 aa3.55□□□□□ -1.84
SH3RF1-202ENST00000502315 IGKV4-1P06312 121 aa3.55□□□□□ -1.84
SH3RF1-202ENST00000502315 HRES1P13985 223 aa3.55□□□□□ -1.84
SH3RF1-202ENST00000502315 KRTAP10-10P60014 251 aa3.55□□□□□ -1.84
SH3RF1-202ENST00000502315 NOTCH2NLQ7Z3S9 236 aa3.55□□□□□ -1.84
SH3RF1-202ENST00000502315 KRTAP3-1Q9BYR8 98 aa3.55□□□□□ -1.84
SH3RF1-202ENST00000502315 A0A1W2PNM2 257 aa3.54□□□□□ -1.84
SH3RF1-202ENST00000502315 K7ERU9 68 aa3.54□□□□□ -1.84
SH3RF1-202ENST00000502315 DSCR10P59022 87 aa3.54□□□□□ -1.84
SH3RF1-202ENST00000502315 SIGMAR1Q99720 223 aa3.54□□□□□ -1.84
SH3RF1-202ENST00000502315 LINC00472Q9H8W2 130 aa3.54□□□□□ -1.84
SH3RF1-202ENST00000502315 FCGBPQ9Y6R7 5405 aaPredicted RBP3.54□□□□□ -1.84
SH3RF1-202ENST00000502315 MT1FP04733 61 aa3.53□□□□□ -1.84
SH3RF1-202ENST00000502315 C14orf132Q9NPU4 83 aa3.53□□□□□ -1.84
SH3RF1-202ENST00000502315 SSPOA2VEC9 5147 aa3.53□□□□□ -1.85
SH3RF1-202ENST00000502315 A8MWP4 228 aa3.52□□□□□ -1.85
SH3RF1-202ENST00000502315 J3KT08 172 aa3.52□□□□□ -1.85
SH3RF1-202ENST00000502315 A0A1B0GW54 56 aa3.51□□□□□ -1.85
SH3RF1-202ENST00000502315 J3QR89 54 aa3.51□□□□□ -1.85
SH3RF1-202ENST00000502315 KRTAP19-6Q3LI70 58 aa3.51□□□□□ -1.85
SH3RF1-202ENST00000502315 JMJD7-PLA2G4BH0Y9G9 81 aa3.5□□□□□ -1.85
SH3RF1-202ENST00000502315 A0A1B0GVX0 72 aa3.49□□□□□ -1.85
SH3RF1-202ENST00000502315 CCKP06307 115 aa3.49□□□□□ -1.85
SH3RF1-202ENST00000502315 RBM3P98179 157 aaKnown RBP3.49□□□□□ -1.85
SH3RF1-202ENST00000502315 ZCCHC13Q8WW36 166 aaKnown RBP3.49□□□□□ -1.85
SH3RF1-202ENST00000502315 VPS25Q9BRG1 176 aa3.49□□□□□ -1.85
SH3RF1-202ENST00000502315 MACF1Q9UPN3 7388 aaKnown RBP3.49□□□□□ -1.85
SH3RF1-202ENST00000502315 IGHV6-1A0A0B4J1U7 121 aa3.48□□□□□ -1.85
SH3RF1-202ENST00000502315 SPINK7P58062 85 aa3.48□□□□□ -1.85
SH3RF1-202ENST00000502315 Q6ZQT0 140 aa3.48□□□□□ -1.85
SH3RF1-202ENST00000502315 Q8N9P0 234 aaPredicted RBP3.48□□□□□ -1.85
SH3RF1-202ENST00000502315 LOC110117498A0A087WWA1 95 aa3.47□□□□□ -1.85
SH3RF1-202ENST00000502315 FAM240AA0A1B0GVK7 77 aa3.47□□□□□ -1.85
SH3RF1-202ENST00000502315 NDUFB1O75438 58 aa3.47□□□□□ -1.85
SH3RF1-202ENST00000502315 DSCR8Q96T75 97 aa3.47□□□□□ -1.85
SH3RF1-202ENST00000502315 MT-ATP8P03928 68 aa3.45□□□□□ -1.86
SH3RF1-202ENST00000502315 SYNE2Q8WXH0 6885 aaKnown RBP3.44□□□□□ -1.86
SH3RF1-202ENST00000502315 ACYP1P07311 99 aa3.44□□□□□ -1.86
SH3RF1-202ENST00000502315 PDE6GP18545 87 aa3.44□□□□□ -1.86
SH3RF1-202ENST00000502315 KRTAP6-3Q3LI67 103 aa3.44□□□□□ -1.86
SH3RF1-202ENST00000502315 DEFB116Q30KQ4 102 aa3.43□□□□□ -1.86
SH3RF1-202ENST00000502315 WFDC13Q8IUB5 93 aa3.43□□□□□ -1.86
SH3RF1-202ENST00000502315 IGKV3D-7A0A0C4DH55 119 aa3.41□□□□□ -1.86
SH3RF1-202ENST00000502315 Q6ZVQ6 151 aa3.41□□□□□ -1.86
SH3RF1-202ENST00000502315 LINC00643Q86TS7 51 aa3.41□□□□□ -1.86
SH3RF1-202ENST00000502315 H1FX-AS1Q4G0G2 97 aa3.4□□□□□ -1.87
SH3RF1-202ENST00000502315 UBL5Q9BZL1 73 aa3.4□□□□□ -1.87
SH3RF1-202ENST00000502315 C8orf17Q9NRJ1 99 aa3.4□□□□□ -1.87
SH3RF1-202ENST00000502315 NREPQ16612 68 aa3.37□□□□□ -1.87
SH3RF1-202ENST00000502315 PRR15Q8IV56 129 aa3.37□□□□□ -1.87
SH3RF1-202ENST00000502315 A0A087WVE0 104 aa3.36□□□□□ -1.87
SH3RF1-202ENST00000502315 ATP5EP2Q5VTU8 51 aa3.36□□□□□ -1.87
SH3RF1-202ENST00000502315 TMEM254Q8TBM7 123 aa3.36□□□□□ -1.87
SH3RF1-202ENST00000502315 BPY2O14599 106 aa3.35□□□□□ -1.87
SH3RF1-202ENST00000502315 MRPL34Q9BQ48 92 aaKnown RBP3.35□□□□□ -1.87
SH3RF1-202ENST00000502315 HIST1H4AP62805 103 aaKnown RBP3.34□□□□□ -1.87
SH3RF1-202ENST00000502315 Q8N9L7 120 aa3.34□□□□□ -1.87
SH3RF1-202ENST00000502315 SCGB1A1P11684 91 aa3.33□□□□□ -1.88
SH3RF1-202ENST00000502315 CXCL6P80162 114 aa3.33□□□□□ -1.88
SH3RF1-202ENST00000502315 IMUPQ9GZP8 106 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms