RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 C21orf62-AS1Q17RA5 79 aa8.42□□□□□ -1.06
NR1H3-227ENST00000498548 DSCR10P59022 87 aa8.4□□□□□ -1.06
NR1H3-227ENST00000498548 FLGP20930 4061 aaPredicted RBP8.4□□□□□ -1.07
NR1H3-227ENST00000498548 TMEM256-PLSCR3K7ERE1 68 aa8.38□□□□□ -1.07
NR1H3-227ENST00000498548 M0R2T5 61 aa8.38□□□□□ -1.07
NR1H3-227ENST00000498548 SIGMAR1Q99720 223 aa8.38□□□□□ -1.07
NR1H3-227ENST00000498548 KRTAP10-6P60371 365 aaPredicted RBP8.37□□□□□ -1.07
NR1H3-227ENST00000498548 C20orf166-AS1Q96NR2 134 aa8.37□□□□□ -1.07
NR1H3-227ENST00000498548 A8MUU9 505 aa8.36□□□□□ -1.07
NR1H3-227ENST00000498548 H3BQ85 93 aa8.36□□□□□ -1.07
NR1H3-227ENST00000498548 DEFB116Q30KQ4 102 aa8.36□□□□□ -1.07
NR1H3-227ENST00000498548 VPS25Q9BRG1 176 aa8.36□□□□□ -1.07
NR1H3-227ENST00000498548 TRBV7-4A0A0J9YYF1 115 aa8.35□□□□□ -1.07
NR1H3-227ENST00000498548 IGKV4-1P06312 121 aa8.35□□□□□ -1.07
NR1H3-227ENST00000498548 LORP23490 312 aaPredicted RBP8.35□□□□□ -1.07
NR1H3-227ENST00000498548 CCKP06307 115 aa8.33□□□□□ -1.08
NR1H3-227ENST00000498548 LINC00313P59037 77 aa8.31□□□□□ -1.08
NR1H3-227ENST00000498548 NOTCH2NLQ7Z3S9 236 aa8.31□□□□□ -1.08
NR1H3-227ENST00000498548 FAM240AA0A1B0GVK7 77 aa8.3□□□□□ -1.08
NR1H3-227ENST00000498548 LINC00472Q9H8W2 130 aa8.29□□□□□ -1.08
NR1H3-227ENST00000498548 KRTAP16-1A8MUX0 517 aa8.28□□□□□ -1.08
NR1H3-227ENST00000498548 JMJD7-PLA2G4BH0Y9G9 81 aa8.28□□□□□ -1.08
NR1H3-227ENST00000498548 ACYP1P07311 99 aa8.27□□□□□ -1.09
NR1H3-227ENST00000498548 RBM3P98179 157 aaKnown RBP8.27□□□□□ -1.09
NR1H3-227ENST00000498548 IGHV6-1A0A0B4J1U7 121 aa8.25□□□□□ -1.09
NR1H3-227ENST00000498548 DSCR8Q96T75 97 aa8.24□□□□□ -1.09
NR1H3-227ENST00000498548 C14orf132Q9NPU4 83 aa8.23□□□□□ -1.09
NR1H3-227ENST00000498548 CRCT1Q9UGL9 99 aa8.23□□□□□ -1.09
NR1H3-227ENST00000498548 FSIP2Q5CZC0 6907 aa8.21□□□□□ -1.1
NR1H3-227ENST00000498548 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
NR1H3-227ENST00000498548 A0A1B0GVX0 72 aa8.17□□□□□ -1.1
NR1H3-227ENST00000498548 MT-ATP8P03928 68 aa8.17□□□□□ -1.1
NR1H3-227ENST00000498548 PDE6GP18545 87 aa8.17□□□□□ -1.1
NR1H3-227ENST00000498548 Q6ZQT0 140 aa8.17□□□□□ -1.1
NR1H3-227ENST00000498548 C8orf87E5RJ46 101 aa8.14□□□□□ -1.11
NR1H3-227ENST00000498548 SCGB1A1P11684 91 aa8.14□□□□□ -1.11
NR1H3-227ENST00000498548 LINC00643Q86TS7 51 aa8.13□□□□□ -1.11
NR1H3-227ENST00000498548 FAM236DA0A1B0GTK5 79 aa8.12□□□□□ -1.11
NR1H3-227ENST00000498548 FAM236CP0DP71 79 aa8.12□□□□□ -1.11
NR1H3-227ENST00000498548 LINC00846Q9NV44 126 aa8.12□□□□□ -1.11
NR1H3-227ENST00000498548 HRES1P13985 223 aa8.11□□□□□ -1.11
NR1H3-227ENST00000498548 J3KT08 172 aa8.1□□□□□ -1.11
NR1H3-227ENST00000498548 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
NR1H3-227ENST00000498548 IMUPQ9GZP8 106 aa8.07□□□□□ -1.12
NR1H3-227ENST00000498548 NDUFB1O75438 58 aa8.06□□□□□ -1.12
NR1H3-227ENST00000498548 MPLKIPQ8TAP9 179 aa8.06□□□□□ -1.12
NR1H3-227ENST00000498548 RBM12B-AS1Q9P1G2 102 aa8.06□□□□□ -1.12
NR1H3-227ENST00000498548 ZCCHC13Q8WW36 166 aaKnown RBP8.05□□□□□ -1.12
NR1H3-227ENST00000498548 C8orf17Q9NRJ1 99 aa8.04□□□□□ -1.12
NR1H3-227ENST00000498548 IGKV3D-7A0A0C4DH55 119 aa8.03□□□□□ -1.12
NR1H3-227ENST00000498548 A0A1B0GW54 56 aa8.03□□□□□ -1.12
NR1H3-227ENST00000498548 PCP4P48539 62 aa8.03□□□□□ -1.12
NR1H3-227ENST00000498548 A8MWP4 228 aa8.02□□□□□ -1.13
NR1H3-227ENST00000498548 UBL5Q9BZL1 73 aa8.02□□□□□ -1.13
NR1H3-227ENST00000498548 Q8N9P0 234 aaPredicted RBP8.01□□□□□ -1.13
NR1H3-227ENST00000498548 SPINK7P58062 85 aa7.99□□□□□ -1.13
NR1H3-227ENST00000498548 NREPQ16612 68 aa7.99□□□□□ -1.13
NR1H3-227ENST00000498548 ATP5EP2Q5VTU8 51 aa7.99□□□□□ -1.13
NR1H3-227ENST00000498548 Q6ZVQ6 151 aa7.99□□□□□ -1.13
NR1H3-227ENST00000498548 MT2AP02795 61 aa7.95□□□□□ -1.14
NR1H3-227ENST00000498548 PRR15Q8IV56 129 aa7.95□□□□□ -1.14
NR1H3-227ENST00000498548 CXCL6P80162 114 aa7.93□□□□□ -1.14
NR1H3-227ENST00000498548 MMP24-AS1A0A0U1RRL7 71 aa7.91□□□□□ -1.14
NR1H3-227ENST00000498548 HIST1H4AP62805 103 aaKnown RBP7.91□□□□□ -1.14
NR1H3-227ENST00000498548 MT1FP04733 61 aa7.9□□□□□ -1.14
NR1H3-227ENST00000498548 K7EQZ3 153 aa7.89□□□□□ -1.15
NR1H3-227ENST00000498548 MRPL34Q9BQ48 92 aaKnown RBP7.89□□□□□ -1.15
NR1H3-227ENST00000498548 WFDC13Q8IUB5 93 aa7.88□□□□□ -1.15
NR1H3-227ENST00000498548 TMEM254Q8TBM7 123 aa7.88□□□□□ -1.15
NR1H3-227ENST00000498548 FAM236AA0A1B0GUQ0 79 aa7.87□□□□□ -1.15
NR1H3-227ENST00000498548 FAM236BA0A1B0GV22 79 aa7.87□□□□□ -1.15
NR1H3-227ENST00000498548 KRTAP10-10P60014 251 aa7.86□□□□□ -1.15
NR1H3-227ENST00000498548 hDV103S1A0JD37 113 aa7.85□□□□□ -1.15
NR1H3-227ENST00000498548 NDUFS5O43920 106 aa7.85□□□□□ -1.15
NR1H3-227ENST00000498548 USH2AO75445 5202 aa7.84□□□□□ -1.15
NR1H3-227ENST00000498548 A0A087WVE0 104 aa7.84□□□□□ -1.15
NR1H3-227ENST00000498548 ANAPC13Q9BS18 74 aa7.84□□□□□ -1.15
NR1H3-227ENST00000498548 BPY2O14599 106 aa7.83□□□□□ -1.16
NR1H3-227ENST00000498548 Q8N9L7 120 aa7.81□□□□□ -1.16
NR1H3-227ENST00000498548 KRTAP9-3Q9BYQ3 159 aa7.81□□□□□ -1.16
NR1H3-227ENST00000498548 ATOX1O00244 68 aa7.8□□□□□ -1.16
NR1H3-227ENST00000498548 SSPOA2VEC9 5147 aa7.78□□□□□ -1.16
NR1H3-227ENST00000498548 Q5W150 140 aa7.77□□□□□ -1.17
NR1H3-227ENST00000498548 IGKV2D-30A0A075B6S6 120 aa7.75□□□□□ -1.17
NR1H3-227ENST00000498548 IGKV2-30P06310 120 aa7.75□□□□□ -1.17
NR1H3-227ENST00000498548 CASC2Q6XLA1 102 aa7.73□□□□□ -1.17
NR1H3-227ENST00000498548 HCG22E2RYF7 251 aa7.72□□□□□ -1.17
NR1H3-227ENST00000498548 COX7CP15954 63 aa7.71□□□□□ -1.18
NR1H3-227ENST00000498548 SERP2Q8N6R1 65 aa7.71□□□□□ -1.18
NR1H3-227ENST00000498548 H1FX-AS1Q4G0G2 97 aa7.7□□□□□ -1.18
NR1H3-227ENST00000498548 CCDC179H3BU77 68 aa7.69□□□□□ -1.18
NR1H3-227ENST00000498548 UQCRQO14949 82 aa7.69□□□□□ -1.18
NR1H3-227ENST00000498548 SMIM20Q8N5G0 67 aa7.69□□□□□ -1.18
NR1H3-227ENST00000498548 C7orf65Q6ZTY9 151 aa7.68□□□□□ -1.18
NR1H3-227ENST00000498548 KRTAP19-1Q8IUB9 90 aa7.68□□□□□ -1.18
NR1H3-227ENST00000498548 TRAV7A0A075B6U4 112 aa7.67□□□□□ -1.18
NR1H3-227ENST00000498548 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.66□□□□□ -1.18
NR1H3-227ENST00000498548 C4orf26Q17RF5 130 aa7.62□□□□□ -1.19
NR1H3-227ENST00000498548 OCR1Q9BZK8 76 aa7.61□□□□□ -1.19
NR1H3-227ENST00000498548 FCGBPQ9Y6R7 5405 aaPredicted RBP7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 86.7 ms