RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 TRBV7-4A0A0J9YYF1 115 aa8.24□□□□□ -1.09
MUC1-220ENST00000498431 TEN1Q86WV5 123 aa8.24□□□□□ -1.09
MUC1-220ENST00000498431 PRO0461Q9UI25 63 aa8.24□□□□□ -1.09
MUC1-220ENST00000498431 TRBV7-7A0A0K0K1E9 115 aa8.23□□□□□ -1.09
MUC1-220ENST00000498431 SMCPP49901 116 aaPredicted RBP8.23□□□□□ -1.09
MUC1-220ENST00000498431 A0A1W2PNM2 257 aa8.21□□□□□ -1.1
MUC1-220ENST00000498431 A0A1B0GV90 55 aa8.2□□□□□ -1.1
MUC1-220ENST00000498431 F8W1H4 67 aa8.2□□□□□ -1.1
MUC1-220ENST00000498431 PDE6GP18545 87 aa8.2□□□□□ -1.1
MUC1-220ENST00000498431 LOC110117498A0A087WWA1 95 aa8.19□□□□□ -1.1
MUC1-220ENST00000498431 CCKP06307 115 aa8.19□□□□□ -1.1
MUC1-220ENST00000498431 C14orf132Q9NPU4 83 aa8.19□□□□□ -1.1
MUC1-220ENST00000498431 Q6ZQT0 140 aa8.17□□□□□ -1.1
MUC1-220ENST00000498431 VPS25Q9BRG1 176 aa8.17□□□□□ -1.1
MUC1-220ENST00000498431 MT2AP02795 61 aa8.16□□□□□ -1.1
MUC1-220ENST00000498431 C21orf62-AS1Q17RA5 79 aa8.16□□□□□ -1.1
MUC1-220ENST00000498431 KRTAP19-1Q8IUB9 90 aa8.16□□□□□ -1.1
MUC1-220ENST00000498431 A0A087WSZ3 146 aa8.15□□□□□ -1.1
MUC1-220ENST00000498431 LCE2BO14633 110 aa8.15□□□□□ -1.1
MUC1-220ENST00000498431 Q96NJ1 140 aa8.15□□□□□ -1.1
MUC1-220ENST00000498431 SS18L2Q9UHA2 77 aa8.15□□□□□ -1.1
MUC1-220ENST00000498431 A0A1B0GW54 56 aa8.11□□□□□ -1.11
MUC1-220ENST00000498431 MT1FP04733 61 aa8.11□□□□□ -1.11
MUC1-220ENST00000498431 C20orf166-AS1Q96NR2 134 aa8.11□□□□□ -1.11
MUC1-220ENST00000498431 ETDBQ3ZM63 59 aa8.1□□□□□ -1.11
MUC1-220ENST00000498431 A8MUU9 505 aa8.09□□□□□ -1.11
MUC1-220ENST00000498431 KRTAP9-3Q9BYQ3 159 aa8.08□□□□□ -1.12
MUC1-220ENST00000498431 KRTAP16-1A8MUX0 517 aa8.03□□□□□ -1.12
MUC1-220ENST00000498431 KRTAP10-10P60014 251 aa8.02□□□□□ -1.13
MUC1-220ENST00000498431 MACF1Q9UPN3 7388 aaKnown RBP8.01□□□□□ -1.13
MUC1-220ENST00000498431 LINC00472Q9H8W2 130 aa8.01□□□□□ -1.13
MUC1-220ENST00000498431 NREPQ16612 68 aa8□□□□□ -1.13
MUC1-220ENST00000498431 FAM236DA0A1B0GTK5 79 aa7.99□□□□□ -1.13
MUC1-220ENST00000498431 IGKV4-1P06312 121 aa7.99□□□□□ -1.13
MUC1-220ENST00000498431 FAM236CP0DP71 79 aa7.99□□□□□ -1.13
MUC1-220ENST00000498431 DSCR10P59022 87 aa7.99□□□□□ -1.13
MUC1-220ENST00000498431 DEFB116Q30KQ4 102 aa7.97□□□□□ -1.13
MUC1-220ENST00000498431 SIGMAR1Q99720 223 aa7.97□□□□□ -1.13
MUC1-220ENST00000498431 J3KT08 172 aa7.96□□□□□ -1.14
MUC1-220ENST00000498431 MPLKIPQ8TAP9 179 aa7.96□□□□□ -1.14
MUC1-220ENST00000498431 SYNE2Q8WXH0 6885 aaKnown RBP7.96□□□□□ -1.14
MUC1-220ENST00000498431 HRES1P13985 223 aa7.95□□□□□ -1.14
MUC1-220ENST00000498431 LINC00846Q9NV44 126 aa7.94□□□□□ -1.14
MUC1-220ENST00000498431 Q6ZVQ6 151 aa7.93□□□□□ -1.14
MUC1-220ENST00000498431 UBL5Q9BZL1 73 aa7.93□□□□□ -1.14
MUC1-220ENST00000498431 ACYP1P07311 99 aa7.92□□□□□ -1.14
MUC1-220ENST00000498431 KRTAP19-6Q3LI70 58 aa7.9□□□□□ -1.14
MUC1-220ENST00000498431 FAM240AA0A1B0GVK7 77 aa7.89□□□□□ -1.15
MUC1-220ENST00000498431 BPY2O14599 106 aa7.89□□□□□ -1.15
MUC1-220ENST00000498431 NDUFB1O75438 58 aa7.89□□□□□ -1.15
MUC1-220ENST00000498431 RBM12B-AS1Q9P1G2 102 aa7.89□□□□□ -1.15
MUC1-220ENST00000498431 A8MWP4 228 aa7.88□□□□□ -1.15
MUC1-220ENST00000498431 A0A1B0GVX0 72 aa7.87□□□□□ -1.15
MUC1-220ENST00000498431 NOTCH2NLQ7Z3S9 236 aa7.87□□□□□ -1.15
MUC1-220ENST00000498431 IGHV6-1A0A0B4J1U7 121 aa7.86□□□□□ -1.15
MUC1-220ENST00000498431 J3QR89 54 aa7.86□□□□□ -1.15
MUC1-220ENST00000498431 LINC00313P59037 77 aa7.86□□□□□ -1.15
MUC1-220ENST00000498431 C8orf87E5RJ46 101 aa7.85□□□□□ -1.15
MUC1-220ENST00000498431 IGKV3D-7A0A0C4DH55 119 aa7.84□□□□□ -1.15
MUC1-220ENST00000498431 PRR15Q8IV56 129 aa7.83□□□□□ -1.16
MUC1-220ENST00000498431 K7EQZ3 153 aa7.79□□□□□ -1.16
MUC1-220ENST00000498431 C8orf17Q9NRJ1 99 aa7.79□□□□□ -1.16
MUC1-220ENST00000498431 CXCL6P80162 114 aa7.78□□□□□ -1.16
MUC1-220ENST00000498431 KRTAP6-3Q3LI67 103 aa7.76□□□□□ -1.17
MUC1-220ENST00000498431 ATP5EP2Q5VTU8 51 aa7.75□□□□□ -1.17
MUC1-220ENST00000498431 Q8N9L7 120 aa7.75□□□□□ -1.17
MUC1-220ENST00000498431 K7ERU9 68 aa7.74□□□□□ -1.17
MUC1-220ENST00000498431 LINC00643Q86TS7 51 aa7.74□□□□□ -1.17
MUC1-220ENST00000498431 MMP24-AS1A0A0U1RRL7 71 aa7.73□□□□□ -1.17
MUC1-220ENST00000498431 hDV103S1A0JD37 113 aa7.7□□□□□ -1.18
MUC1-220ENST00000498431 TMEM254Q8TBM7 123 aa7.7□□□□□ -1.18
MUC1-220ENST00000498431 Q8N9P0 234 aaPredicted RBP7.69□□□□□ -1.18
MUC1-220ENST00000498431 MRPL34Q9BQ48 92 aaKnown RBP7.68□□□□□ -1.18
MUC1-220ENST00000498431 SPINK7P58062 85 aa7.67□□□□□ -1.18
MUC1-220ENST00000498431 CASC2Q6XLA1 102 aa7.67□□□□□ -1.18
MUC1-220ENST00000498431 WFDC13Q8IUB5 93 aa7.67□□□□□ -1.18
MUC1-220ENST00000498431 HCG22E2RYF7 251 aa7.66□□□□□ -1.18
MUC1-220ENST00000498431 ZCCHC13Q8WW36 166 aaKnown RBP7.65□□□□□ -1.18
MUC1-220ENST00000498431 HIST1H4AP62805 103 aaKnown RBP7.64□□□□□ -1.19
MUC1-220ENST00000498431 NDUFS5O43920 106 aa7.61□□□□□ -1.19
MUC1-220ENST00000498431 A0A087WVE0 104 aa7.55□□□□□ -1.2
MUC1-220ENST00000498431 MUC12Q9UKN1 5478 aa7.53□□□□□ -1.2
MUC1-220ENST00000498431 MT-ATP8P03928 68 aa7.52□□□□□ -1.21
MUC1-220ENST00000498431 IMUPQ9GZP8 106 aa7.52□□□□□ -1.21
MUC1-220ENST00000498431 TP53AIP1Q9HCN2 124 aa7.51□□□□□ -1.21
MUC1-220ENST00000498431 NEBP20929 6669 aa7.51□□□□□ -1.21
MUC1-220ENST00000498431 Q5W150 140 aa7.48□□□□□ -1.21
MUC1-220ENST00000498431 H1FX-AS1Q4G0G2 97 aa7.43□□□□□ -1.22
MUC1-220ENST00000498431 UQCRQO14949 82 aa7.42□□□□□ -1.22
MUC1-220ENST00000498431 SCGB1A1P11684 91 aa7.41□□□□□ -1.22
MUC1-220ENST00000498431 IGKV2D-30A0A075B6S6 120 aa7.38□□□□□ -1.23
MUC1-220ENST00000498431 TRAV22A0A0B4J277 110 aa7.38□□□□□ -1.23
MUC1-220ENST00000498431 IGKV2-30P06310 120 aa7.38□□□□□ -1.23
MUC1-220ENST00000498431 KRTAP20-1Q3LI63 56 aa7.38□□□□□ -1.23
MUC1-220ENST00000498431 C7orf65Q6ZTY9 151 aa7.38□□□□□ -1.23
MUC1-220ENST00000498431 OCR1Q9BZK8 76 aa7.37□□□□□ -1.23
MUC1-220ENST00000498431 FAM236AA0A1B0GUQ0 79 aa7.36□□□□□ -1.23
MUC1-220ENST00000498431 FAM236BA0A1B0GV22 79 aa7.36□□□□□ -1.23
MUC1-220ENST00000498431 A6NN06 94 aa7.36□□□□□ -1.23
MUC1-220ENST00000498431 MT1BP07438 61 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms