RNA–Protein interactions for RNA: ENST00000497342.1

CKS1BP2-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 2, humanhuman

BASIC

Gene CKS1BP2, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP2-201ENST00000497342 SFTA3P0C7M3 94 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 SSBP1Q04837 148 aaKnown RBP0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 ZNF56Q15929 161 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 PIGYQ3MUY2 71 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 LINC01590Q5TEZ4 76 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 Q5VV11 94 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 Q6ZQY7 126 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 Q86TA4 180 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 LINC00208Q96KT6 92 aa0.8□□□□□ -2.28
CKS1BP2-201ENST00000497342 TRAV13-2A0A0B4J235 113 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 I3L2K1 104 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 SNAPC5O75971 98 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 ANGP03950 147 aaKnown RBP0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 ELOF1P60002 83 aaKnown RBP0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 GTF2H5Q6ZYL4 71 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 PPP1R1CQ8WVI7 109 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 BET1LQ9NYM9 111 aa0.79□□□□□ -2.28
CKS1BP2-201ENST00000497342 FAM24AA6NFZ4 105 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 M0R143 59 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 PKIAP61925 76 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 RPL37P61927 97 aaKnown RBP0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 WT1-ASQ06250 92 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 HMGN3Q15651 99 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 KRTAP19-8Q3LI54 63 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 CYP2G1PQ6ZSU1 146 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 SVBPQ8N300 66 aa0.78□□□□□ -2.28
CKS1BP2-201ENST00000497342 A0A087WWC5 75 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 RBAKDNA6NC62 111 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 MPC2O95563 127 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 UBE2D3P61077 147 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 SNRPGP62308 76 aaKnown RBP0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 COX7B2Q8TF08 81 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 FAM167A-AS1Q96KT0 104 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 Q96NJ1 140 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 SNHG12Q9BXW3 62 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 KRTAP4-4Q9BYR3 166 aa0.77□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRBV30A0A0K0K1B3 111 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 C9orf92A6NGG3 77 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 NCR3O14931 201 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 RPL7L1Q6DKI1 246 aaKnown RBP0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 C20orf197Q8N268 126 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 TTTY10Q9BZA0 68 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 ABRACLQ9P1F3 81 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 LENEPQ9Y5L5 61 aa0.76□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRBV7-3A0A075B6L6 115 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 SPINK1P00995 79 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRAPPC2P0DI81 140 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRAPPC2BP0DI82 140 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 SPTSSBQ8NFR3 76 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 AMELXQ99217 191 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 CDC42SE2Q9NRR3 84 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 R4GMQ9 66 aa0.75□□□□□ -2.29
CKS1BP2-201ENST00000497342 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 A0A1W2PPM0 123 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 PHGR1C9JFL3 82 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 UBE2D2P62837 147 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 COL5A1-AS1Q5SY13 56 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 S100A7L2Q5SY68 101 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 FAM74A4Q5TZK3 123 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 PLAC4Q8WY50 150 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 NDUFA4L2Q9NRX3 87 aa0.74□□□□□ -2.29
CKS1BP2-201ENST00000497342 FXYD6-FXYD2A0A087WZ82 144 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 GVQW2A0A096LPI5 108 aaPredicted RBP0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 RPS29P62273 56 aaKnown RBP0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 MGST2Q99735 147 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 KRTAP4-3Q9BYR4 195 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 V9GYV3 84 aa0.73□□□□□ -2.29
CKS1BP2-201ENST00000497342 MT-ATP8P03928 68 aa0.72□□□□□ -2.29
CKS1BP2-201ENST00000497342 CLPSL2Q6UWE3 100 aa0.72□□□□□ -2.29
CKS1BP2-201ENST00000497342 TRAV22A0A0B4J277 110 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 TRBV7-7A0A0K0K1E9 115 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 NAP1L6A6NFF2 107 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 IGLC1P0CG04 106 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 GNG2P59768 71 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 S100A10P60903 97 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 KRTAP19-3Q7Z4W3 81 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 SPRR2GQ9BYE4 73 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 CMC2Q9NRP2 79 aa0.71□□□□□ -2.3
CKS1BP2-201ENST00000497342 NDUFC1O43677 76 aa0.7□□□□□ -2.3
CKS1BP2-201ENST00000497342 KRTDAPP60985 99 aa0.7□□□□□ -2.3
CKS1BP2-201ENST00000497342 SCP2D1Q9UJQ7 156 aa0.7□□□□□ -2.3
CKS1BP2-201ENST00000497342 hADV29S1A0JD25 119 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 FXYD1O00168 92 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 BCE1O60756 84 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 MT1XP80297 61 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 CFAP126Q5VTH2 177 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 BAGE3Q86Y29 109 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 SPRR4Q96PI1 79 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 S100A13Q99584 98 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 AP4S1Q9Y587 144 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 LINC01558Q9Y6Z2 57 aa0.69□□□□□ -2.3
CKS1BP2-201ENST00000497342 CRYM-AS1A6NIL9 109 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 H7BZZ5 65 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 C6orf201Q7Z4U5 140 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 FAM213BQ8TBF2 198 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 SMIM11BQ8TCY0 68 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 ARHGAP5-AS1Q96IT6 56 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 TRGV9Q99603 122 aa0.68□□□□□ -2.3
CKS1BP2-201ENST00000497342 LINC00472Q9H8W2 130 aa0.68□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms