RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 TOMM7Q9P0U1 55 aa2.34□□□□□ -2.03
VPS52-222ENST00000495981 KMT2DO14686 5537 aa2.34□□□□□ -2.04
VPS52-222ENST00000495981 IGKV2-28A0A075B6P5 120 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 K7EMI3 77 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 M0R378 163 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 IGKV2D-28P01615 120 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 LINC00483Q53H64 154 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 KRTAP5-11Q6L8G4 156 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 SCGB1D4Q6XE38 83 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 MIR7-3HGQ8N6C7 128 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 Q8N9L7 120 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 GPR98Q8WXG9 6306 aa2.33□□□□□ -2.04
VPS52-222ENST00000495981 ATP5EP56381 51 aaPredicted RBP2.32□□□□□ -2.04
VPS52-222ENST00000495981 FP248Q71RG6 208 aaPredicted RBP2.32□□□□□ -2.04
VPS52-222ENST00000495981 ADM2Q7Z4H4 148 aa2.32□□□□□ -2.04
VPS52-222ENST00000495981 SERP2Q8N6R1 65 aa2.32□□□□□ -2.04
VPS52-222ENST00000495981 COX7B2Q8TF08 81 aa2.32□□□□□ -2.04
VPS52-222ENST00000495981 BRK1Q8WUW1 75 aa2.32□□□□□ -2.04
VPS52-222ENST00000495981 TOMM6Q96B49 74 aa2.32□□□□□ -2.04
VPS52-222ENST00000495981 DSCR8Q96T75 97 aa2.32□□□□□ -2.04
VPS52-222ENST00000495981 NXT2Q9NPJ8 142 aaKnown RBP2.32□□□□□ -2.04
VPS52-222ENST00000495981 LINC01546A6NGU7 62 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 LEPROTL1O95214 131 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 FXYD2P54710 66 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 TMEM170BQ5T4T1 132 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 KTN1-AS1Q86SY8 53 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 LINC00643Q86TS7 51 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 SPRR4Q96PI1 79 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 MDN1Q9NU22 5596 aa2.31□□□□□ -2.04
VPS52-222ENST00000495981 IGKV2D-26A0A0A0MRZ7 120 aa2.3□□□□□ -2.04
VPS52-222ENST00000495981 MYMXA0A1B0GTQ4 84 aa2.3□□□□□ -2.04
VPS52-222ENST00000495981 hADV29S1A0JD25 119 aa2.3□□□□□ -2.04
VPS52-222ENST00000495981 LINC01549A6NIU2 74 aa2.3□□□□□ -2.04
VPS52-222ENST00000495981 KRTAP6-3Q3LI67 103 aa2.3□□□□□ -2.04
VPS52-222ENST00000495981 FAM19A2Q8N3H0 131 aa2.3□□□□□ -2.04
VPS52-222ENST00000495981 ST20-AS1Q8NBB2 130 aa2.3□□□□□ -2.04
VPS52-222ENST00000495981 ZNF22P17026 224 aaPredicted RBP2.29□□□□□ -2.04
VPS52-222ENST00000495981 SPRR1AP35321 89 aa2.29□□□□□ -2.04
VPS52-222ENST00000495981 LINC00313P59037 77 aa2.29□□□□□ -2.04
VPS52-222ENST00000495981 KRTAP20-1Q3LI63 56 aa2.29□□□□□ -2.04
VPS52-222ENST00000495981 IFI27L1Q96BM0 104 aa2.29□□□□□ -2.04
VPS52-222ENST00000495981 ZNF625Q96I27 306 aaPredicted RBP2.29□□□□□ -2.04
VPS52-222ENST00000495981 NHP2Q9NX24 153 aaKnown RBP2.29□□□□□ -2.04
VPS52-222ENST00000495981 A8MUU9 505 aa2.28□□□□□ -2.04
VPS52-222ENST00000495981 SLC25A20O43772 301 aa2.28□□□□□ -2.04
VPS52-222ENST00000495981 LGALS3P17931 250 aaKnown RBP2.28□□□□□ -2.04
VPS52-222ENST00000495981 RPS29P62273 56 aaKnown RBP2.28□□□□□ -2.04
VPS52-222ENST00000495981 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.28□□□□□ -2.04
VPS52-222ENST00000495981 SPAG11AQ6PDA7 123 aa2.28□□□□□ -2.04
VPS52-222ENST00000495981 DAND5Q8N907 189 aa2.28□□□□□ -2.04
VPS52-222ENST00000495981 SMCR5Q8TEV8 140 aa2.28□□□□□ -2.04
VPS52-222ENST00000495981 SCGB3A1Q96QR1 104 aa2.28□□□□□ -2.04
VPS52-222ENST00000495981 HIGD2AQ9BW72 106 aa2.28□□□□□ -2.04
VPS52-222ENST00000495981 C11orf86A6NJI1 115 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 A8MWP4 228 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 K7ERJ3 54 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 NDUFC1O43677 76 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 HBDP02042 147 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 MOBPQ13875 183 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 COX17Q14061 63 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 SFTA2Q6UW10 78 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 CYSTM1Q9H1C7 97 aa2.27□□□□□ -2.05
VPS52-222ENST00000495981 NCR3O14931 201 aa2.26□□□□□ -2.05
VPS52-222ENST00000495981 SPINK1P00995 79 aa2.26□□□□□ -2.05
VPS52-222ENST00000495981 CCKP06307 115 aa2.26□□□□□ -2.05
VPS52-222ENST00000495981 KLKP1Q107X0 134 aa2.26□□□□□ -2.05
VPS52-222ENST00000495981 Q9BRP9 147 aa2.26□□□□□ -2.05
VPS52-222ENST00000495981 KCNQ1DNQ9H478 68 aa2.26□□□□□ -2.05
VPS52-222ENST00000495981 TRBV10-2A0A0K0K1G8 114 aa2.25□□□□□ -2.05
VPS52-222ENST00000495981 H7BZZ5 65 aa2.25□□□□□ -2.05
VPS52-222ENST00000495981 ZNF73O43830 326 aaPredicted RBP2.25□□□□□ -2.05
VPS52-222ENST00000495981 ERC2-IT1O76042 136 aa2.25□□□□□ -2.05
VPS52-222ENST00000495981 KRTAP10-5P60370 271 aa2.25□□□□□ -2.05
VPS52-222ENST00000495981 LCA10Q71F78 164 aa2.25□□□□□ -2.05
VPS52-222ENST00000495981 A0A0B4J2C4 111 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 TRBV10-3A0A0K0K1G6 114 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 A8MUN3 132 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 LST1O00453 97 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 TIMM17BO60830 172 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 TSPEAR-AS2P59090 65 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 Q1T7F1 81 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 LCE3EQ5T5B0 92 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 Q6ZRX8 168 aa2.24□□□□□ -2.05
VPS52-222ENST00000495981 TRAV13-2A0A0B4J235 113 aa2.23□□□□□ -2.05
VPS52-222ENST00000495981 TEX49A0A1B0GTD5 131 aa2.23□□□□□ -2.05
VPS52-222ENST00000495981 TMEM256-PLSCR3K7ERE1 68 aa2.23□□□□□ -2.05
VPS52-222ENST00000495981 ATXN8Q156A1 80 aa2.23□□□□□ -2.05
VPS52-222ENST00000495981 ATP11AUNQ6ZP68 121 aa2.23□□□□□ -2.05
VPS52-222ENST00000495981 NDUFA12Q9UI09 145 aa2.23□□□□□ -2.05
VPS52-222ENST00000495981 LOC107984156A0A0G2JMH3 177 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 ETDCA0A1B0GVM5 59 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 K7ERS5 55 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 LINC00158P58513 81 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 PCOTHQ58A44 107 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 Q6JHZ5 121 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 C7orf65Q6ZTY9 151 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 ARL17AQ8IVW1 177 aa2.22□□□□□ -2.05
VPS52-222ENST00000495981 TRAV12-1A0A0B4J245 112 aa2.21□□□□□ -2.06
VPS52-222ENST00000495981 M0R2T5 61 aa2.21□□□□□ -2.06
VPS52-222ENST00000495981 IGLV6-57P01721 117 aa2.21□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 96 ms