RNA–Protein interactions for RNA: ENST00000495640.1

COPS3-211, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 333 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-211ENST00000495640 KIAA0586Q9BVV6 1533 aa-0.43□□□□□ -2.48
COPS3-211ENST00000495640 STARD9Q9P2P6 4700 aa-0.44□□□□□ -2.48
COPS3-211ENST00000495640 ETDCA0A1B0GVM5 59 aa-0.44□□□□□ -2.48
COPS3-211ENST00000495640 ATXN8Q156A1 80 aa-0.44□□□□□ -2.48
COPS3-211ENST00000495640 FAM186AA6NE01 2351 aa-0.44□□□□□ -2.48
COPS3-211ENST00000495640 LAMA1P25391 3075 aa-0.44□□□□□ -2.48
COPS3-211ENST00000495640 ANKRD36CQ5JPF3 1778 aa-0.45□□□□□ -2.48
COPS3-211ENST00000495640 C3P01024 1663 aa-0.45□□□□□ -2.48
COPS3-211ENST00000495640 C9orf92A6NGG3 77 aa-0.45□□□□□ -2.48
COPS3-211ENST00000495640 H3BNG1 76 aa-0.45□□□□□ -2.48
COPS3-211ENST00000495640 DNAH11Q96DT5 4516 aa-0.45□□□□□ -2.48
COPS3-211ENST00000495640 NBEAL2Q6ZNJ1 2754 aa-0.45□□□□□ -2.48
COPS3-211ENST00000495640 RANBP2P49792 3224 aaKnown RBP-0.46□□□□□ -2.48
COPS3-211ENST00000495640 UTP20O75691 2785 aaKnown RBP-0.46□□□□□ -2.48
COPS3-211ENST00000495640 DEFB114Q30KQ6 69 aa-0.46□□□□□ -2.48
COPS3-211ENST00000495640 MYO18BQ8IUG5 2567 aa-0.46□□□□□ -2.48
COPS3-211ENST00000495640 SPTBN5Q9NRC6 3674 aaKnown RBP-0.46□□□□□ -2.48
COPS3-211ENST00000495640 SPRR2FQ96RM1 72 aa-0.47□□□□□ -2.48
COPS3-211ENST00000495640 S4R3F8 94 aa-0.47□□□□□ -2.48
COPS3-211ENST00000495640 PCLOQ9Y6V0 5065 aa-0.47□□□□□ -2.49
COPS3-211ENST00000495640 MADDQ8WXG6 1647 aa-0.49□□□□□ -2.49
COPS3-211ENST00000495640 RELNP78509 3460 aa-0.49□□□□□ -2.49
COPS3-211ENST00000495640 HERC1Q15751 4861 aa-0.49□□□□□ -2.49
COPS3-211ENST00000495640 DNAH1Q9P2D7 4330 aa-0.5□□□□□ -2.49
COPS3-211ENST00000495640 RPS27P42677 84 aaKnown RBP-0.5□□□□□ -2.49
COPS3-211ENST00000495640 RPS27LQ71UM5 84 aaKnown RBP-0.5□□□□□ -2.49
COPS3-211ENST00000495640 DEFB106AQ8N104 65 aa-0.5□□□□□ -2.49
COPS3-211ENST00000495640 KIF1AQ12756 1690 aa-0.5□□□□□ -2.49
COPS3-211ENST00000495640 ACACAQ13085 2346 aa-0.5□□□□□ -2.49
COPS3-211ENST00000495640 ABCC6O95255 1503 aa-0.51□□□□□ -2.49
COPS3-211ENST00000495640 KRTAP19-8Q3LI54 63 aa-0.51□□□□□ -2.49
COPS3-211ENST00000495640 WDR87Q6ZQQ6 2873 aa-0.51□□□□□ -2.49
COPS3-211ENST00000495640 DNAH2Q9P225 4427 aa-0.52□□□□□ -2.49
COPS3-211ENST00000495640 DNMBPQ6XZF7 1577 aa-0.52□□□□□ -2.49
COPS3-211ENST00000495640 ITPR3Q14573 2671 aa-0.52□□□□□ -2.49
COPS3-211ENST00000495640 WT1-ASQ06250 92 aa-0.52□□□□□ -2.49
COPS3-211ENST00000495640 GNG13Q9P2W3 67 aa-0.52□□□□□ -2.49
COPS3-211ENST00000495640 FAT1Q14517 4588 aa-0.52□□□□□ -2.49
COPS3-211ENST00000495640 TRIOO75962 3097 aa-0.53□□□□□ -2.49
COPS3-211ENST00000495640 UBR4Q5T4S7 5183 aa-0.53□□□□□ -2.49
COPS3-211ENST00000495640 MINOS1Q5TGZ0 78 aa-0.53□□□□□ -2.49
COPS3-211ENST00000495640 CCDC168Q8NDH2 2452 aa-0.53□□□□□ -2.49
COPS3-211ENST00000495640 A0A0C4DFX4 3053 aa-0.53□□□□□ -2.49
COPS3-211ENST00000495640 TOGARAM1Q9Y4F4 1720 aa-0.53□□□□□ -2.49
COPS3-211ENST00000495640 MUC17Q685J3 4493 aa-0.53□□□□□ -2.49
COPS3-211ENST00000495640 MROH1Q8NDA8 1641 aa-0.54□□□□□ -2.5
COPS3-211ENST00000495640 EFCAB5A4FU69 1503 aa-0.54□□□□□ -2.5
COPS3-211ENST00000495640 ACACBO00763 2458 aa-0.55□□□□□ -2.5
COPS3-211ENST00000495640 LINC01549A6NIU2 74 aa-0.56□□□□□ -2.5
COPS3-211ENST00000495640 NCBP2-AS2Q69YL0 99 aa-0.56□□□□□ -2.5
COPS3-211ENST00000495640 RIF1Q5UIP0 2472 aaKnown RBP-0.56□□□□□ -2.5
COPS3-211ENST00000495640 MGAM2Q2M2H8 2515 aa-0.57□□□□□ -2.5
COPS3-211ENST00000495640 COL12A1Q99715 3063 aa-0.58□□□□□ -2.5
COPS3-211ENST00000495640 C6orf48Q9UBA6 75 aa-0.58□□□□□ -2.5
COPS3-211ENST00000495640 USH2AO75445 5202 aa-0.59□□□□□ -2.5
COPS3-211ENST00000495640 ABCA6Q8N139 1617 aa-0.59□□□□□ -2.5
COPS3-211ENST00000495640 CLASP1Q7Z460 1538 aa-0.59□□□□□ -2.5
COPS3-211ENST00000495640 DNAH8Q96JB1 4490 aa-0.6□□□□□ -2.51
COPS3-211ENST00000495640 CCDC180Q9P1Z9 1646 aa-0.6□□□□□ -2.51
COPS3-211ENST00000495640 LY75O60449 1722 aa-0.61□□□□□ -2.51
COPS3-211ENST00000495640 GLI2P10070 1586 aa-0.61□□□□□ -2.51
COPS3-211ENST00000495640 DYNC2H1Q8NCM8 4307 aaKnown RBP-0.61□□□□□ -2.51
COPS3-211ENST00000495640 CROCC2H7BZ55 1655 aa-0.61□□□□□ -2.51
COPS3-211ENST00000495640 USP9YO00507 2555 aaPredicted RBP-0.61□□□□□ -2.51
COPS3-211ENST00000495640 CDC42BPAQ5VT25 1732 aa-0.62□□□□□ -2.51
COPS3-211ENST00000495640 IGLV5-48A0A075B6I7 105 aa-0.63□□□□□ -2.51
COPS3-211ENST00000495640 A0A087WWC5 75 aa-0.63□□□□□ -2.51
COPS3-211ENST00000495640 K7EMI3 77 aa-0.64□□□□□ -2.51
COPS3-211ENST00000495640 FCER1GP30273 86 aa-0.64□□□□□ -2.51
COPS3-211ENST00000495640 TIMM8BQ9Y5J9 83 aaPredicted RBP-0.64□□□□□ -2.51
COPS3-211ENST00000495640 TIAM1Q13009 1591 aa-0.65□□□□□ -2.51
COPS3-211ENST00000495640 SFTA3P0C7M3 94 aa-0.65□□□□□ -2.51
COPS3-211ENST00000495640 DEFB110Q30KQ9 67 aa-0.65□□□□□ -2.51
COPS3-211ENST00000495640 TLN2Q9Y4G6 2542 aa-0.65□□□□□ -2.51
COPS3-211ENST00000495640 FRYQ5TBA9 3013 aa-0.66□□□□□ -2.51
COPS3-211ENST00000495640 USP9XQ93008 2570 aaPredicted RBP-0.66□□□□□ -2.51
COPS3-211ENST00000495640 CELSR3Q9NYQ7 3312 aa-0.67□□□□□ -2.52
COPS3-211ENST00000495640 H3BUA1 57 aa-0.67□□□□□ -2.52
COPS3-211ENST00000495640 M0R1W7 72 aa-0.67□□□□□ -2.52
COPS3-211ENST00000495640 HERC2O95714 4834 aa-0.68□□□□□ -2.52
COPS3-211ENST00000495640 KRTAP20-2Q3LI61 65 aa-0.68□□□□□ -2.52
COPS3-211ENST00000495640 DNAH7Q8WXX0 4024 aa-0.69□□□□□ -2.52
COPS3-211ENST00000495640 CMYA5Q8N3K9 4069 aa-0.69□□□□□ -2.52
COPS3-211ENST00000495640 KRTAP19-5Q3LI72 72 aa-0.7□□□□□ -2.52
COPS3-211ENST00000495640 C5orf42Q9H799 3197 aa-0.71□□□□□ -2.52
COPS3-211ENST00000495640 MMP24-AS1A0A0U1RRL7 71 aa-0.71□□□□□ -2.52
COPS3-211ENST00000495640 IGIPA6NJ69 53 aa-0.71□□□□□ -2.52
COPS3-211ENST00000495640 EPPK1P58107 5090 aaKnown RBP-0.71□□□□□ -2.52
COPS3-211ENST00000495640 ALS2Q96Q42 1657 aa-0.72□□□□□ -2.52
COPS3-211ENST00000495640 MT4P47944 62 aa-0.72□□□□□ -2.52
COPS3-211ENST00000495640 TEX15Q9BXT5 2789 aa-0.73□□□□□ -2.53
COPS3-211ENST00000495640 PLECQ15149 4684 aaKnown RBP-0.73□□□□□ -2.53
COPS3-211ENST00000495640 LAMA3Q16787 3333 aa-0.73□□□□□ -2.53
COPS3-211ENST00000495640 NMES1Q9C002 83 aa-0.74□□□□□ -2.53
COPS3-211ENST00000495640 NOP10Q9NPE3 64 aaKnown RBP-0.74□□□□□ -2.53
COPS3-211ENST00000495640 EEA1Q15075 1411 aa-0.74□□□□□ -2.53
COPS3-211ENST00000495640 ABCA10Q8WWZ4 1543 aa-0.74□□□□□ -2.53
COPS3-211ENST00000495640 SRCAPQ6ZRS2 3230 aa-0.75□□□□□ -2.53
COPS3-211ENST00000495640 SERF2P84101 59 aa-0.75□□□□□ -2.53
COPS3-211ENST00000495640 ITPR1Q14643 2758 aa-0.75□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms