RNA–Protein interactions for RNA: ENST00000495530.5

PTPRE-211, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 5

Gene PTPRE, Length 987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-211ENST00000495530 UBL5Q9BZL1 73 aa8.32□□□□□ -1.08
PTPRE-211ENST00000495530 K7ERU9 68 aa8.3□□□□□ -1.08
PTPRE-211ENST00000495530 C1orf195Q5TG92 126 aa8.3□□□□□ -1.08
PTPRE-211ENST00000495530 KRTAP4-12Q9BQ66 201 aa8.3□□□□□ -1.08
PTPRE-211ENST00000495530 LINC00846Q9NV44 126 aa8.3□□□□□ -1.08
PTPRE-211ENST00000495530 J3KT08 172 aa8.28□□□□□ -1.08
PTPRE-211ENST00000495530 LINC00472Q9H8W2 130 aa8.28□□□□□ -1.08
PTPRE-211ENST00000495530 LCE3BQ5TA77 95 aa8.27□□□□□ -1.09
PTPRE-211ENST00000495530 Q6ZVQ6 151 aa8.27□□□□□ -1.09
PTPRE-211ENST00000495530 FP248Q71RG6 208 aaPredicted RBP8.27□□□□□ -1.09
PTPRE-211ENST00000495530 Q96NJ1 140 aa8.25□□□□□ -1.09
PTPRE-211ENST00000495530 RETNLBQ9BQ08 111 aa8.25□□□□□ -1.09
PTPRE-211ENST00000495530 IGKV4-1P06312 121 aa8.24□□□□□ -1.09
PTPRE-211ENST00000495530 SIGMAR1Q99720 223 aa8.23□□□□□ -1.09
PTPRE-211ENST00000495530 BPY2O14599 106 aa8.22□□□□□ -1.09
PTPRE-211ENST00000495530 DEFB116Q30KQ4 102 aa8.22□□□□□ -1.09
PTPRE-211ENST00000495530 NDUFB1O75438 58 aa8.21□□□□□ -1.1
PTPRE-211ENST00000495530 PRR4Q16378 134 aa8.21□□□□□ -1.1
PTPRE-211ENST00000495530 CRCT1Q9UGL9 99 aa8.21□□□□□ -1.1
PTPRE-211ENST00000495530 FSIP2Q5CZC0 6907 aa8.2□□□□□ -1.1
PTPRE-211ENST00000495530 IGLV7-46A0A075B6I9 117 aa8.2□□□□□ -1.1
PTPRE-211ENST00000495530 LINC00643Q86TS7 51 aa8.18□□□□□ -1.1
PTPRE-211ENST00000495530 CXCL6P80162 114 aa8.17□□□□□ -1.1
PTPRE-211ENST00000495530 A8MWP4 228 aa8.16□□□□□ -1.1
PTPRE-211ENST00000495530 ATP5EP2Q5VTU8 51 aa8.16□□□□□ -1.1
PTPRE-211ENST00000495530 DSCR10P59022 87 aa8.13□□□□□ -1.11
PTPRE-211ENST00000495530 A0A1B0GVX0 72 aa8.12□□□□□ -1.11
PTPRE-211ENST00000495530 PRR15Q8IV56 129 aa8.12□□□□□ -1.11
PTPRE-211ENST00000495530 CDIP1Q9H305 208 aa8.12□□□□□ -1.11
PTPRE-211ENST00000495530 IGHV6-1A0A0B4J1U7 121 aa8.11□□□□□ -1.11
PTPRE-211ENST00000495530 IGKV3D-7A0A0C4DH55 119 aa8.11□□□□□ -1.11
PTPRE-211ENST00000495530 KRTAP19-1Q8IUB9 90 aa8.11□□□□□ -1.11
PTPRE-211ENST00000495530 C8orf87E5RJ46 101 aa8.1□□□□□ -1.11
PTPRE-211ENST00000495530 LINC00313P59037 77 aa8.1□□□□□ -1.11
PTPRE-211ENST00000495530 TPRXLQ17RH7 258 aa8.1□□□□□ -1.11
PTPRE-211ENST00000495530 K7EQZ3 153 aa8.08□□□□□ -1.12
PTPRE-211ENST00000495530 KRTAP13-3Q3SY46 172 aa8.07□□□□□ -1.12
PTPRE-211ENST00000495530 KRTAP9-9Q9BYP9 154 aa8.07□□□□□ -1.12
PTPRE-211ENST00000495530 KRTAP9-4Q9BYQ2 154 aa8.07□□□□□ -1.12
PTPRE-211ENST00000495530 C9orf92A6NGG3 77 aa8.05□□□□□ -1.12
PTPRE-211ENST00000495530 Q8N9L7 120 aa8.05□□□□□ -1.12
PTPRE-211ENST00000495530 C8orf17Q9NRJ1 99 aa8.05□□□□□ -1.12
PTPRE-211ENST00000495530 HIST1H4AP62805 103 aaKnown RBP8.03□□□□□ -1.12
PTPRE-211ENST00000495530 NOTCH2NLQ7Z3S9 236 aa8.01□□□□□ -1.13
PTPRE-211ENST00000495530 KRTAP4-8A0A0G2JLE6 195 aa8□□□□□ -1.13
PTPRE-211ENST00000495530 IMUPQ9GZP8 106 aa8□□□□□ -1.13
PTPRE-211ENST00000495530 hDV103S1A0JD37 113 aa7.99□□□□□ -1.13
PTPRE-211ENST00000495530 HCG22E2RYF7 251 aa7.99□□□□□ -1.13
PTPRE-211ENST00000495530 MMP24-AS1A0A0U1RRL7 71 aa7.98□□□□□ -1.13
PTPRE-211ENST00000495530 CASC2Q6XLA1 102 aa7.98□□□□□ -1.13
PTPRE-211ENST00000495530 MT-ATP8P03928 68 aa7.97□□□□□ -1.13
PTPRE-211ENST00000495530 TMEM254Q8TBM7 123 aa7.97□□□□□ -1.13
PTPRE-211ENST00000495530 KRTAP16-1A8MUX0 517 aa7.95□□□□□ -1.14
PTPRE-211ENST00000495530 WFDC13Q8IUB5 93 aa7.95□□□□□ -1.14
PTPRE-211ENST00000495530 MRPL34Q9BQ48 92 aaKnown RBP7.95□□□□□ -1.14
PTPRE-211ENST00000495530 Q75L30 129 aa7.93□□□□□ -1.14
PTPRE-211ENST00000495530 C20orf166-AS1Q96NR2 134 aa7.93□□□□□ -1.14
PTPRE-211ENST00000495530 Q8N9P0 234 aaPredicted RBP7.92□□□□□ -1.14
PTPRE-211ENST00000495530 A0A087WVE0 104 aa7.91□□□□□ -1.14
PTPRE-211ENST00000495530 A8MUU9 505 aa7.91□□□□□ -1.14
PTPRE-211ENST00000495530 NDUFS5O43920 106 aa7.89□□□□□ -1.15
PTPRE-211ENST00000495530 RPL37P61927 97 aaKnown RBP7.89□□□□□ -1.15
PTPRE-211ENST00000495530 ATP11AUNQ6ZP68 121 aa7.88□□□□□ -1.15
PTPRE-211ENST00000495530 SEC61BP60468 96 aaKnown RBP7.86□□□□□ -1.15
PTPRE-211ENST00000495530 SCGB1A1P11684 91 aa7.85□□□□□ -1.15
PTPRE-211ENST00000495530 TP53AIP1Q9HCN2 124 aa7.85□□□□□ -1.15
PTPRE-211ENST00000495530 KRTAP9-7A8MTY7 169 aa7.83□□□□□ -1.16
PTPRE-211ENST00000495530 ZCCHC13Q8WW36 166 aaKnown RBP7.8□□□□□ -1.16
PTPRE-211ENST00000495530 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
PTPRE-211ENST00000495530 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
PTPRE-211ENST00000495530 PCOTHQ58A44 107 aa7.78□□□□□ -1.16
PTPRE-211ENST00000495530 UQCRQO14949 82 aa7.77□□□□□ -1.17
PTPRE-211ENST00000495530 SMIM20Q8N5G0 67 aa7.77□□□□□ -1.17
PTPRE-211ENST00000495530 LCE1DQ5T752 114 aa7.75□□□□□ -1.17
PTPRE-211ENST00000495530 ATOX1O00244 68 aa7.73□□□□□ -1.17
PTPRE-211ENST00000495530 OCR1Q9BZK8 76 aa7.73□□□□□ -1.17
PTPRE-211ENST00000495530 KRTAP4-7Q9BYR0 210 aa7.72□□□□□ -1.17
PTPRE-211ENST00000495530 Q5W150 140 aa7.71□□□□□ -1.18
PTPRE-211ENST00000495530 MUC17Q685J3 4493 aa7.71□□□□□ -1.18
PTPRE-211ENST00000495530 TRAV22A0A0B4J277 110 aa7.7□□□□□ -1.18
PTPRE-211ENST00000495530 C5orf47Q569G3 176 aa7.69□□□□□ -1.18
PTPRE-211ENST00000495530 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
PTPRE-211ENST00000495530 MP68P56378 58 aa7.67□□□□□ -1.18
PTPRE-211ENST00000495530 H0Y9P7 68 aa7.65□□□□□ -1.18
PTPRE-211ENST00000495530 H3BPC8 53 aa7.63□□□□□ -1.19
PTPRE-211ENST00000495530 SPINK7P58062 85 aa7.63□□□□□ -1.19
PTPRE-211ENST00000495530 C7orf65Q6ZTY9 151 aa7.62□□□□□ -1.19
PTPRE-211ENST00000495530 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
PTPRE-211ENST00000495530 LOC101927531A0A1B0GV80 90 aa7.61□□□□□ -1.19
PTPRE-211ENST00000495530 IGKV2D-30A0A075B6S6 120 aa7.6□□□□□ -1.19
PTPRE-211ENST00000495530 IGKV2-30P06310 120 aa7.6□□□□□ -1.19
PTPRE-211ENST00000495530 C1orf64Q8NEQ6 169 aa7.59□□□□□ -1.19
PTPRE-211ENST00000495530 LINC00208Q96KT6 92 aa7.59□□□□□ -1.19
PTPRE-211ENST00000495530 KRTAP4-1Q9BYQ7 146 aa7.56□□□□□ -1.2
PTPRE-211ENST00000495530 CYP4F30PQ9H0H9 118 aa7.56□□□□□ -1.2
PTPRE-211ENST00000495530 ANAPC13Q9BS18 74 aa7.55□□□□□ -1.2
PTPRE-211ENST00000495530 COX7CP15954 63 aa7.53□□□□□ -1.2
PTPRE-211ENST00000495530 KRTAP4-9Q9BYQ8 210 aa7.53□□□□□ -1.2
PTPRE-211ENST00000495530 RBM12B-AS1Q9P1G2 102 aa7.5□□□□□ -1.21
PTPRE-211ENST00000495530 HRES1P13985 223 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms