RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 KRTAP19-3Q7Z4W3 81 aa0.46□□□□□ -2.34
LRIF1-203ENST00000494675 TMEM167BQ9NRX6 74 aa0.46□□□□□ -2.34
LRIF1-203ENST00000494675 CCDC168Q8NDH2 2452 aa0.46□□□□□ -2.34
LRIF1-203ENST00000494675 LINC01546A6NGU7 62 aa0.46□□□□□ -2.34
LRIF1-203ENST00000494675 TRPM2O94759 1503 aa0.45□□□□□ -2.34
LRIF1-203ENST00000494675 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
LRIF1-203ENST00000494675 ACANP16112 2415 aa0.45□□□□□ -2.34
LRIF1-203ENST00000494675 WT1-ASQ06250 92 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 S4R3F8 94 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 HTTP42858 3142 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 SYNE1Q8NF91 8797 aaKnown RBP0.44□□□□□ -2.34
LRIF1-203ENST00000494675 FRYQ5TBA9 3013 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 FRAS1Q86XX4 4008 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 CRYBG3Q68DQ2 2970 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 UTP20O75691 2785 aaKnown RBP0.44□□□□□ -2.34
LRIF1-203ENST00000494675 SZT2Q5T011 3432 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 SETD2Q9BYW2 2564 aaPredicted RBP0.44□□□□□ -2.34
LRIF1-203ENST00000494675 SPTBN4Q9H254 2564 aa0.44□□□□□ -2.34
LRIF1-203ENST00000494675 NCOR2Q9Y618 2525 aa0.43□□□□□ -2.34
LRIF1-203ENST00000494675 COL7A1Q02388 2944 aa0.43□□□□□ -2.34
LRIF1-203ENST00000494675 FASNP49327 2511 aaKnown RBP0.43□□□□□ -2.34
LRIF1-203ENST00000494675 FAT2Q9NYQ8 4349 aa0.43□□□□□ -2.34
LRIF1-203ENST00000494675 ZNF469Q96JG9 3925 aaPredicted RBP0.43□□□□□ -2.34
LRIF1-203ENST00000494675 TACC2O95359 2948 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 SMIM2Q9BVW6 85 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 FAM186AA6NE01 2351 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 ANKHD1Q8IWZ3 2542 aaKnown RBP0.42□□□□□ -2.34
LRIF1-203ENST00000494675 SPINK1P00995 79 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 SMR3AQ99954 134 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 EPG5Q9HCE0 2579 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 COL6A5A8TX70 2615 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 MAST4O15021 2626 aa0.42□□□□□ -2.34
LRIF1-203ENST00000494675 MGAQ8IWI9 3026 aa0.41□□□□□ -2.34
LRIF1-203ENST00000494675 LAMA5O15230 3695 aa0.41□□□□□ -2.34
LRIF1-203ENST00000494675 SPINK6Q6UWN8 80 aa0.41□□□□□ -2.34
LRIF1-203ENST00000494675 MTORP42345 2549 aa0.41□□□□□ -2.34
LRIF1-203ENST00000494675 FLNBO75369 2602 aaKnown RBP0.41□□□□□ -2.34
LRIF1-203ENST00000494675 PRM1P04553 51 aa0.4□□□□□ -2.34
LRIF1-203ENST00000494675 DEFB135Q30KP9 77 aa0.4□□□□□ -2.34
LRIF1-203ENST00000494675 SAMD9LQ8IVG5 1584 aa0.4□□□□□ -2.35
LRIF1-203ENST00000494675 TNXBP22105 4242 aa0.4□□□□□ -2.35
LRIF1-203ENST00000494675 CFAP54Q96N23 3096 aa0.4□□□□□ -2.35
LRIF1-203ENST00000494675 CLTCL1P53675 1640 aa0.4□□□□□ -2.35
LRIF1-203ENST00000494675 TENM2Q9NT68 2774 aa0.4□□□□□ -2.35
LRIF1-203ENST00000494675 MAP1AP78559 2803 aaPredicted RBP0.4□□□□□ -2.35
LRIF1-203ENST00000494675 ANKRD11Q6UB99 2663 aaPredicted RBP0.39□□□□□ -2.35
LRIF1-203ENST00000494675 CELSR3Q9NYQ7 3312 aa0.39□□□□□ -2.35
LRIF1-203ENST00000494675 MYO18BQ8IUG5 2567 aa0.39□□□□□ -2.35
LRIF1-203ENST00000494675 NBEAQ8NFP9 2946 aa0.39□□□□□ -2.35
LRIF1-203ENST00000494675 NDUFA1O15239 70 aa0.39□□□□□ -2.35
LRIF1-203ENST00000494675 TEP1Q99973 2627 aaKnown RBP0.39□□□□□ -2.35
LRIF1-203ENST00000494675 DSTQ03001 7570 aaKnown RBP0.38□□□□□ -2.35
LRIF1-203ENST00000494675 FLNAP21333 2647 aaKnown RBP0.38□□□□□ -2.35
LRIF1-203ENST00000494675 ATP7AQ04656 1500 aa0.38□□□□□ -2.35
LRIF1-203ENST00000494675 USP9XQ93008 2570 aaPredicted RBP0.38□□□□□ -2.35
LRIF1-203ENST00000494675 SVEP1Q4LDE5 3571 aa0.38□□□□□ -2.35
LRIF1-203ENST00000494675 ADGRG4Q8IZF6 3080 aa0.38□□□□□ -2.35
LRIF1-203ENST00000494675 HECTD4Q9Y4D8 3996 aa0.38□□□□□ -2.35
LRIF1-203ENST00000494675 USP9YO00507 2555 aaPredicted RBP0.38□□□□□ -2.35
LRIF1-203ENST00000494675 HRNRQ86YZ3 2850 aaPredicted RBP0.37□□□□□ -2.35
LRIF1-203ENST00000494675 TGP01266 2768 aa0.37□□□□□ -2.35
LRIF1-203ENST00000494675 MMP24-AS1A0A0U1RRL7 71 aa0.37□□□□□ -2.35
LRIF1-203ENST00000494675 H0YGG7 62 aa0.37□□□□□ -2.35
LRIF1-203ENST00000494675 M0R2T5 61 aa0.37□□□□□ -2.35
LRIF1-203ENST00000494675 WDR87Q6ZQQ6 2873 aa0.37□□□□□ -2.35
LRIF1-203ENST00000494675 HIVEP1P15822 2718 aa0.37□□□□□ -2.35
LRIF1-203ENST00000494675 STAB1Q9NY15 2570 aa0.37□□□□□ -2.35
LRIF1-203ENST00000494675 U3KQA8 63 aa0.36□□□□□ -2.35
LRIF1-203ENST00000494675 KMT2AQ03164 3969 aa0.36□□□□□ -2.35
LRIF1-203ENST00000494675 COL6A3P12111 3177 aa0.36□□□□□ -2.35
LRIF1-203ENST00000494675 C5orf42Q9H799 3197 aa0.36□□□□□ -2.35
LRIF1-203ENST00000494675 TLN2Q9Y4G6 2542 aa0.36□□□□□ -2.35
LRIF1-203ENST00000494675 H3BUA1 57 aa0.36□□□□□ -2.35
LRIF1-203ENST00000494675 RPL39P62891 51 aaKnown RBP0.36□□□□□ -2.35
LRIF1-203ENST00000494675 CSMD1Q96PZ7 3565 aa0.36□□□□□ -2.35
LRIF1-203ENST00000494675 MROH2BQ7Z745 1585 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 NBPF19A0A087WUL8 3843 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 ITPR1Q14643 2758 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 SMG1Q96Q15 3661 aaKnown RBP0.35□□□□□ -2.35
LRIF1-203ENST00000494675 IGLV5-48A0A075B6I7 105 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 A8MTW9 85 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 SNRPGP62308 76 aaKnown RBP0.35□□□□□ -2.35
LRIF1-203ENST00000494675 LEAP2Q969E1 77 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 SRCAPQ6ZRS2 3230 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 SONP18583 2426 aaKnown RBP0.35□□□□□ -2.35
LRIF1-203ENST00000494675 DOPEY1Q5JWR5 2465 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 AKAP9Q99996 3911 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 DMXL2Q8TDJ6 3036 aa0.35□□□□□ -2.35
LRIF1-203ENST00000494675 ACACBO00763 2458 aa0.34□□□□□ -2.35
LRIF1-203ENST00000494675 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.35
LRIF1-203ENST00000494675 TRIOO75962 3097 aa0.34□□□□□ -2.35
LRIF1-203ENST00000494675 DUOX1Q9NRD9 1551 aa0.34□□□□□ -2.35
LRIF1-203ENST00000494675 VPS13BQ7Z7G8 4022 aa0.34□□□□□ -2.35
LRIF1-203ENST00000494675 DEFB104AQ8WTQ1 72 aa0.34□□□□□ -2.36
LRIF1-203ENST00000494675 XIRP2A4UGR9 3374 aa0.34□□□□□ -2.36
LRIF1-203ENST00000494675 SPTAN1Q13813 2472 aaKnown RBP0.33□□□□□ -2.36
LRIF1-203ENST00000494675 ATMQ13315 3056 aa0.33□□□□□ -2.36
LRIF1-203ENST00000494675 NBEAL1Q6ZS30 2694 aa0.33□□□□□ -2.36
LRIF1-203ENST00000494675 H3BNG1 76 aa0.33□□□□□ -2.36
LRIF1-203ENST00000494675 RPL39LQ96EH5 51 aaKnown RBP0.33□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms