RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 MGPP08493 103 aa1.57□□□□□ -2.16
SMC2-205ENST00000493955 ARMS2P0C7Q2 107 aa1.57□□□□□ -2.16
SMC2-205ENST00000493955 FCER1GP30273 86 aa1.57□□□□□ -2.16
SMC2-205ENST00000493955 UBE2D3P61077 147 aa1.57□□□□□ -2.16
SMC2-205ENST00000493955 UBE2D2P62837 147 aa1.57□□□□□ -2.16
SMC2-205ENST00000493955 TSKUQ8WUA8 353 aa1.57□□□□□ -2.16
SMC2-205ENST00000493955 MRPL35Q9NZE8 188 aaKnown RBP1.57□□□□□ -2.16
SMC2-205ENST00000493955 PLAC8Q9NZF1 115 aa1.57□□□□□ -2.16
SMC2-205ENST00000493955 TMEM218A2RU14 115 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 LINC01549A6NIU2 74 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 HIGD1CA8MV81 97 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 APOC3P02656 99 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 CRIP1P50238 77 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 COX6A2Q02221 97 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 DMAC1Q96GE9 116 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 SEC11CQ9BY50 192 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 DPH3P1Q9H4G8 78 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 ST20Q9HBF5 79 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 TMEM242Q9NWH2 141 aa1.56□□□□□ -2.16
SMC2-205ENST00000493955 TRBV7-3A0A075B6L6 115 aa1.55□□□□□ -2.16
SMC2-205ENST00000493955 TRBV25-1A0A075B6N4 114 aa1.55□□□□□ -2.16
SMC2-205ENST00000493955 TMEM262E9PQX1 116 aa1.55□□□□□ -2.16
SMC2-205ENST00000493955 NCR2O95944 276 aa1.55□□□□□ -2.16
SMC2-205ENST00000493955 IGLC6P0CF74 106 aa1.55□□□□□ -2.16
SMC2-205ENST00000493955 Q0VG73 95 aa1.55□□□□□ -2.16
SMC2-205ENST00000493955 SMCO4Q9NRQ5 59 aa1.55□□□□□ -2.16
SMC2-205ENST00000493955 FAT4Q6V0I7 4981 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 SMIM27A0A1W2PRY6 76 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 I3L3M4 83 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 J3QR89 54 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 K7EMI3 77 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 S100A1P23297 94 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 IQCJQ1A5X6 159 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 MRPL54Q6P161 138 aaKnown RBP1.54□□□□□ -2.16
SMC2-205ENST00000493955 SPINK6Q6UWN8 80 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 C20orf78Q9BR46 151 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 C2orf88Q9BSF0 95 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 CNFNQ9BYD5 112 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 TMEM191AQ9H0A3 160 aa1.54□□□□□ -2.16
SMC2-205ENST00000493955 NXT2Q9NPJ8 142 aaKnown RBP1.54□□□□□ -2.16
SMC2-205ENST00000493955 C7orf77A4D0Y5 90 aa1.53□□□□□ -2.16
SMC2-205ENST00000493955 IFI27P40305 119 aaPredicted RBP1.53□□□□□ -2.16
SMC2-205ENST00000493955 SEC11AP67812 179 aa1.53□□□□□ -2.16
SMC2-205ENST00000493955 V9GYV3 84 aa1.53□□□□□ -2.16
SMC2-205ENST00000493955 D6R8Y8 96 aa1.52□□□□□ -2.17
SMC2-205ENST00000493955 M0QY20 66 aa1.52□□□□□ -2.17
SMC2-205ENST00000493955 MUC2Q02817 5179 aa1.52□□□□□ -2.17
SMC2-205ENST00000493955 ATP11AUNQ6ZP68 121 aa1.52□□□□□ -2.17
SMC2-205ENST00000493955 BAGE3Q86Y29 109 aa1.52□□□□□ -2.17
SMC2-205ENST00000493955 DPH3Q96FX2 82 aa1.52□□□□□ -2.17
SMC2-205ENST00000493955 GVQW2A0A096LPI5 108 aaPredicted RBP1.51□□□□□ -2.17
SMC2-205ENST00000493955 LOC101927531A0A1B0GV80 90 aa1.51□□□□□ -2.17
SMC2-205ENST00000493955 C20orf202A1L168 122 aa1.51□□□□□ -2.17
SMC2-205ENST00000493955 PPDPFLQ8WWR9 84 aa1.51□□□□□ -2.17
SMC2-205ENST00000493955 TMEM141Q96I45 108 aa1.51□□□□□ -2.17
SMC2-205ENST00000493955 SMIM2Q9BVW6 85 aa1.51□□□□□ -2.17
SMC2-205ENST00000493955 C9orf116Q5BN46 136 aaPredicted RBP1.5□□□□□ -2.17
SMC2-205ENST00000493955 SFTA2Q6UW10 78 aa1.5□□□□□ -2.17
SMC2-205ENST00000493955 ATOH7Q8N100 152 aa1.5□□□□□ -2.17
SMC2-205ENST00000493955 Q8N8P6 123 aa1.5□□□□□ -2.17
SMC2-205ENST00000493955 MUC17Q685J3 4493 aa1.5□□□□□ -2.17
SMC2-205ENST00000493955 TRBV20-1A0A075B6N2 111 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 LINC00587B1AMM8 73 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 S100A12P80511 92 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 RPL39LQ96EH5 51 aaKnown RBP1.49□□□□□ -2.17
SMC2-205ENST00000493955 LINC00474Q9P2X8 69 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 FAM236AA0A1B0GUQ0 79 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 LINC00959A0A1B0GUT2 108 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 FAM236BA0A1B0GV22 79 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 LEPROTL1O95214 131 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 CCKP06307 115 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 PLNP26678 52 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 POLR2KP53803 58 aaKnown RBP1.49□□□□□ -2.17
SMC2-205ENST00000493955 COPS9Q8WXC6 57 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 LINC00208Q96KT6 92 aa1.49□□□□□ -2.17
SMC2-205ENST00000493955 NDUFA1O15239 70 aa1.48□□□□□ -2.17
SMC2-205ENST00000493955 KRTAP19-2Q3LHN2 52 aa1.48□□□□□ -2.17
SMC2-205ENST00000493955 TMEM170BQ5T4T1 132 aa1.48□□□□□ -2.17
SMC2-205ENST00000493955 IFI27L1Q96BM0 104 aa1.48□□□□□ -2.17
SMC2-205ENST00000493955 VPS25Q9BRG1 176 aa1.48□□□□□ -2.17
SMC2-205ENST00000493955 CDC42SE2Q9NRR3 84 aa1.48□□□□□ -2.17
SMC2-205ENST00000493955 UBE2D4Q9Y2X8 147 aa1.48□□□□□ -2.17
SMC2-205ENST00000493955 FSIP2Q5CZC0 6907 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 UBE2D1P51668 147 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 SPAG11BQ08648 103 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 Q6ZUT4 128 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 C5orf38Q86SI9 138 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 C18orf32Q8TCD1 76 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 PLAC4Q8WY50 150 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 TOMM7Q9P0U1 55 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 C6orf48Q9UBA6 75 aa1.47□□□□□ -2.17
SMC2-205ENST00000493955 MYMXA0A1B0GTQ4 84 aa1.46□□□□□ -2.18
SMC2-205ENST00000493955 LINC01546A6NGU7 62 aa1.46□□□□□ -2.18
SMC2-205ENST00000493955 IGIPA6NJ69 53 aa1.46□□□□□ -2.18
SMC2-205ENST00000493955 F8VRH5 84 aa1.46□□□□□ -2.18
SMC2-205ENST00000493955 K7ERU9 68 aa1.46□□□□□ -2.18
SMC2-205ENST00000493955 SNCGO76070 127 aa1.46□□□□□ -2.18
SMC2-205ENST00000493955 KRTDAPP60985 99 aa1.46□□□□□ -2.18
SMC2-205ENST00000493955 RPL39P62891 51 aaKnown RBP1.46□□□□□ -2.18
SMC2-205ENST00000493955 PMCHL1Q16048 86 aa1.46□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms