RNA–Protein interactions for RNA: ENST00000493727.5

UPF3A-210, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 937 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-210ENST00000493727 C14orf132Q9NPU4 83 aa7.03□□□□□ -1.28
UPF3A-210ENST00000493727 MUC17Q685J3 4493 aa7.02□□□□□ -1.29
UPF3A-210ENST00000493727 A0A0G2JQZ4 141 aa7.02□□□□□ -1.29
UPF3A-210ENST00000493727 ETDBQ3ZM63 59 aa7.02□□□□□ -1.29
UPF3A-210ENST00000493727 HRCT1Q6UXD1 115 aa7.02□□□□□ -1.29
UPF3A-210ENST00000493727 TEN1Q86WV5 123 aa7.02□□□□□ -1.29
UPF3A-210ENST00000493727 VPS25Q9BRG1 176 aa7.02□□□□□ -1.29
UPF3A-210ENST00000493727 A0A0U1RQV1 116 aa7.01□□□□□ -1.29
UPF3A-210ENST00000493727 SPAG11AQ6PDA7 123 aa7.01□□□□□ -1.29
UPF3A-210ENST00000493727 OBSCN-AS1Q96MR7 158 aa7.01□□□□□ -1.29
UPF3A-210ENST00000493727 TRBV7-4A0A0J9YYF1 115 aa7□□□□□ -1.29
UPF3A-210ENST00000493727 CCKP06307 115 aa6.99□□□□□ -1.29
UPF3A-210ENST00000493727 PDE6GP18545 87 aa6.99□□□□□ -1.29
UPF3A-210ENST00000493727 LOC110117498A0A087WWA1 95 aa6.98□□□□□ -1.29
UPF3A-210ENST00000493727 CD164Q04900 197 aa6.98□□□□□ -1.29
UPF3A-210ENST00000493727 Q6ZQT0 140 aa6.97□□□□□ -1.29
UPF3A-210ENST00000493727 KRTAP9-8Q9BYQ0 159 aa6.97□□□□□ -1.29
UPF3A-210ENST00000493727 A0A1W2PNM2 257 aa6.96□□□□□ -1.3
UPF3A-210ENST00000493727 SPINK1P00995 79 aa6.96□□□□□ -1.3
UPF3A-210ENST00000493727 TRBV7-7A0A0K0K1E9 115 aa6.95□□□□□ -1.3
UPF3A-210ENST00000493727 LIMD2Q9BT23 127 aa6.95□□□□□ -1.3
UPF3A-210ENST00000493727 RPS29P62273 56 aaKnown RBP6.94□□□□□ -1.3
UPF3A-210ENST00000493727 Q6Q795 121 aa6.94□□□□□ -1.3
UPF3A-210ENST00000493727 A0A087WSZ3 146 aa6.93□□□□□ -1.3
UPF3A-210ENST00000493727 IGKV2D-30A0A075B6S6 120 aa6.92□□□□□ -1.3
UPF3A-210ENST00000493727 SS18L2Q9UHA2 77 aa6.92□□□□□ -1.3
UPF3A-210ENST00000493727 A0A1B0GW54 56 aa6.89□□□□□ -1.31
UPF3A-210ENST00000493727 J3QR89 54 aa6.87□□□□□ -1.31
UPF3A-210ENST00000493727 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
UPF3A-210ENST00000493727 Q5XG85 94 aa6.87□□□□□ -1.31
UPF3A-210ENST00000493727 IGLV7-46A0A075B6I9 117 aa6.85□□□□□ -1.31
UPF3A-210ENST00000493727 RETNLBQ9BQ08 111 aa6.85□□□□□ -1.31
UPF3A-210ENST00000493727 NREPQ16612 68 aa6.84□□□□□ -1.31
UPF3A-210ENST00000493727 FSIP2Q5CZC0 6907 aa6.84□□□□□ -1.31
UPF3A-210ENST00000493727 ACYP1P07311 99 aa6.83□□□□□ -1.32
UPF3A-210ENST00000493727 ASB16-AS1Q495Z4 193 aa6.83□□□□□ -1.32
UPF3A-210ENST00000493727 UBL5Q9BZL1 73 aa6.82□□□□□ -1.32
UPF3A-210ENST00000493727 FAM240AA0A1B0GVK7 77 aa6.81□□□□□ -1.32
UPF3A-210ENST00000493727 C1orf195Q5TG92 126 aa6.81□□□□□ -1.32
UPF3A-210ENST00000493727 FP248Q71RG6 208 aaPredicted RBP6.81□□□□□ -1.32
UPF3A-210ENST00000493727 LINC00846Q9NV44 126 aa6.81□□□□□ -1.32
UPF3A-210ENST00000493727 SIGMAR1Q99720 223 aa6.8□□□□□ -1.32
UPF3A-210ENST00000493727 K7ERU9 68 aa6.79□□□□□ -1.32
UPF3A-210ENST00000493727 DEFB116Q30KQ4 102 aa6.79□□□□□ -1.32
UPF3A-210ENST00000493727 Q6ZVQ6 151 aa6.79□□□□□ -1.32
UPF3A-210ENST00000493727 IGKV4-1P06312 121 aa6.78□□□□□ -1.32
UPF3A-210ENST00000493727 LINC00472Q9H8W2 130 aa6.78□□□□□ -1.32
UPF3A-210ENST00000493727 Q96NJ1 140 aa6.77□□□□□ -1.33
UPF3A-210ENST00000493727 J3KT08 172 aa6.76□□□□□ -1.33
UPF3A-210ENST00000493727 BPY2O14599 106 aa6.76□□□□□ -1.33
UPF3A-210ENST00000493727 NDUFB1O75438 58 aa6.72□□□□□ -1.33
UPF3A-210ENST00000493727 A8MWP4 228 aa6.7□□□□□ -1.34
UPF3A-210ENST00000493727 KRTAP13-3Q3SY46 172 aa6.7□□□□□ -1.34
UPF3A-210ENST00000493727 IGHV6-1A0A0B4J1U7 121 aa6.69□□□□□ -1.34
UPF3A-210ENST00000493727 IGKV3D-7A0A0C4DH55 119 aa6.69□□□□□ -1.34
UPF3A-210ENST00000493727 ATP5EP2Q5VTU8 51 aa6.69□□□□□ -1.34
UPF3A-210ENST00000493727 LINC00643Q86TS7 51 aa6.69□□□□□ -1.34
UPF3A-210ENST00000493727 CRCT1Q9UGL9 99 aa6.69□□□□□ -1.34
UPF3A-210ENST00000493727 A0A1B0GVX0 72 aa6.68□□□□□ -1.34
UPF3A-210ENST00000493727 CXCL6P80162 114 aa6.68□□□□□ -1.34
UPF3A-210ENST00000493727 C9orf92A6NGG3 77 aa6.67□□□□□ -1.34
UPF3A-210ENST00000493727 DSCR10P59022 87 aa6.67□□□□□ -1.34
UPF3A-210ENST00000493727 SEC61BP60468 96 aaKnown RBP6.67□□□□□ -1.34
UPF3A-210ENST00000493727 K7EQZ3 153 aa6.66□□□□□ -1.34
UPF3A-210ENST00000493727 C8orf87E5RJ46 101 aa6.65□□□□□ -1.34
UPF3A-210ENST00000493727 PRR15Q8IV56 129 aa6.65□□□□□ -1.34
UPF3A-210ENST00000493727 Q8N9L7 120 aa6.65□□□□□ -1.34
UPF3A-210ENST00000493727 LINC00313P59037 77 aa6.64□□□□□ -1.35
UPF3A-210ENST00000493727 KRTAP4-1Q9BYQ7 146 aa6.63□□□□□ -1.35
UPF3A-210ENST00000493727 HIST1H4AP62805 103 aaKnown RBP6.62□□□□□ -1.35
UPF3A-210ENST00000493727 C8orf17Q9NRJ1 99 aa6.61□□□□□ -1.35
UPF3A-210ENST00000493727 KRTAP2-2Q9BYT5 123 aa6.59□□□□□ -1.35
UPF3A-210ENST00000493727 MMP24-AS1A0A0U1RRL7 71 aa6.58□□□□□ -1.36
UPF3A-210ENST00000493727 NOTCH2NLQ7Z3S9 236 aa6.58□□□□□ -1.36
UPF3A-210ENST00000493727 hDV103S1A0JD37 113 aa6.57□□□□□ -1.36
UPF3A-210ENST00000493727 HCG22E2RYF7 251 aa6.57□□□□□ -1.36
UPF3A-210ENST00000493727 WFDC13Q8IUB5 93 aa6.57□□□□□ -1.36
UPF3A-210ENST00000493727 MT-ATP8P03928 68 aa6.56□□□□□ -1.36
UPF3A-210ENST00000493727 CASC2Q6XLA1 102 aa6.55□□□□□ -1.36
UPF3A-210ENST00000493727 TMEM254Q8TBM7 123 aa6.54□□□□□ -1.36
UPF3A-210ENST00000493727 A0A087WVE0 104 aa6.53□□□□□ -1.36
UPF3A-210ENST00000493727 MRPL34Q9BQ48 92 aaKnown RBP6.53□□□□□ -1.36
UPF3A-210ENST00000493727 KRTAP16-1A8MUX0 517 aa6.52□□□□□ -1.37
UPF3A-210ENST00000493727 NDUFS5O43920 106 aa6.52□□□□□ -1.37
UPF3A-210ENST00000493727 IMUPQ9GZP8 106 aa6.52□□□□□ -1.37
UPF3A-210ENST00000493727 KRTAP19-2Q3LHN2 52 aa6.5□□□□□ -1.37
UPF3A-210ENST00000493727 Q75L30 129 aa6.5□□□□□ -1.37
UPF3A-210ENST00000493727 A8MUU9 505 aa6.49□□□□□ -1.37
UPF3A-210ENST00000493727 RPL37P61927 97 aaKnown RBP6.49□□□□□ -1.37
UPF3A-210ENST00000493727 C20orf166-AS1Q96NR2 134 aa6.49□□□□□ -1.37
UPF3A-210ENST00000493727 MT1HP80294 61 aa6.46□□□□□ -1.38
UPF3A-210ENST00000493727 ATP11AUNQ6ZP68 121 aa6.46□□□□□ -1.38
UPF3A-210ENST00000493727 PCOTHQ58A44 107 aa6.45□□□□□ -1.38
UPF3A-210ENST00000493727 SCGB1A1P11684 91 aa6.44□□□□□ -1.38
UPF3A-210ENST00000493727 FLGP20930 4061 aaPredicted RBP6.44□□□□□ -1.38
UPF3A-210ENST00000493727 FAM236AA0A1B0GUQ0 79 aa6.43□□□□□ -1.38
UPF3A-210ENST00000493727 FAM236BA0A1B0GV22 79 aa6.43□□□□□ -1.38
UPF3A-210ENST00000493727 TP53AIP1Q9HCN2 124 aa6.41□□□□□ -1.38
UPF3A-210ENST00000493727 ZCCHC13Q8WW36 166 aaKnown RBP6.4□□□□□ -1.38
UPF3A-210ENST00000493727 KRTAP10-6P60371 365 aaPredicted RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms