RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 KRTAP4-8Q9BYQ9 185 aa6.34□□□□□ -1.39
CTSA-209ENST00000493522 C21orf62-AS1Q17RA5 79 aa6.33□□□□□ -1.4
CTSA-209ENST00000493522 GTF2H5Q6ZYL4 71 aa6.33□□□□□ -1.4
CTSA-209ENST00000493522 IGKV4-1P06312 121 aa6.31□□□□□ -1.4
CTSA-209ENST00000493522 SEC61BP60468 96 aaKnown RBP6.3□□□□□ -1.4
CTSA-209ENST00000493522 DEFB116Q30KQ4 102 aa6.3□□□□□ -1.4
CTSA-209ENST00000493522 PRO0461Q9UI25 63 aa6.3□□□□□ -1.4
CTSA-209ENST00000493522 LINC00472Q9H8W2 130 aa6.29□□□□□ -1.4
CTSA-209ENST00000493522 A0A1B0GW54 56 aa6.28□□□□□ -1.4
CTSA-209ENST00000493522 DSCR10P59022 87 aa6.26□□□□□ -1.41
CTSA-209ENST00000493522 RPL37P61927 97 aaKnown RBP6.25□□□□□ -1.41
CTSA-209ENST00000493522 J3KT08 172 aa6.24□□□□□ -1.41
CTSA-209ENST00000493522 PCOTHQ58A44 107 aa6.24□□□□□ -1.41
CTSA-209ENST00000493522 IGHV6-1A0A0B4J1U7 121 aa6.23□□□□□ -1.41
CTSA-209ENST00000493522 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.23□□□□□ -1.41
CTSA-209ENST00000493522 A0A1B0GVX0 72 aa6.22□□□□□ -1.41
CTSA-209ENST00000493522 F8W1H4 67 aa6.22□□□□□ -1.41
CTSA-209ENST00000493522 NREPQ16612 68 aa6.22□□□□□ -1.41
CTSA-209ENST00000493522 CRCT1Q9UGL9 99 aa6.22□□□□□ -1.41
CTSA-209ENST00000493522 LINC00313P59037 77 aa6.21□□□□□ -1.42
CTSA-209ENST00000493522 NDUFB1O75438 58 aa6.2□□□□□ -1.42
CTSA-209ENST00000493522 Q75L30 129 aa6.2□□□□□ -1.42
CTSA-209ENST00000493522 KRTAP4-1Q9BYQ7 146 aa6.2□□□□□ -1.42
CTSA-209ENST00000493522 ETDBQ3ZM63 59 aa6.19□□□□□ -1.42
CTSA-209ENST00000493522 A8MWP4 228 aa6.18□□□□□ -1.42
CTSA-209ENST00000493522 C8orf87E5RJ46 101 aa6.18□□□□□ -1.42
CTSA-209ENST00000493522 NOTCH2NLQ7Z3S9 236 aa6.18□□□□□ -1.42
CTSA-209ENST00000493522 A0A1B0GV90 55 aa6.17□□□□□ -1.42
CTSA-209ENST00000493522 C20orf166-AS1Q96NR2 134 aa6.17□□□□□ -1.42
CTSA-209ENST00000493522 A8MUU9 505 aa6.16□□□□□ -1.42
CTSA-209ENST00000493522 KRTAP16-1A8MUX0 517 aa6.16□□□□□ -1.42
CTSA-209ENST00000493522 ATP11AUNQ6ZP68 121 aa6.16□□□□□ -1.42
CTSA-209ENST00000493522 IGKV3D-7A0A0C4DH55 119 aa6.15□□□□□ -1.42
CTSA-209ENST00000493522 Q6ZVQ6 151 aa6.15□□□□□ -1.42
CTSA-209ENST00000493522 KRTAP4-12Q9BQ66 201 aa6.15□□□□□ -1.42
CTSA-209ENST00000493522 BPY2O14599 106 aa6.14□□□□□ -1.43
CTSA-209ENST00000493522 C8orf17Q9NRJ1 99 aa6.13□□□□□ -1.43
CTSA-209ENST00000493522 LINC00846Q9NV44 126 aa6.13□□□□□ -1.43
CTSA-209ENST00000493522 PRR15Q8IV56 129 aa6.12□□□□□ -1.43
CTSA-209ENST00000493522 UBL5Q9BZL1 73 aa6.12□□□□□ -1.43
CTSA-209ENST00000493522 K7EQZ3 153 aa6.11□□□□□ -1.43
CTSA-209ENST00000493522 MMP24-AS1A0A0U1RRL7 71 aa6.08□□□□□ -1.44
CTSA-209ENST00000493522 MT1HP80294 61 aa6.08□□□□□ -1.44
CTSA-209ENST00000493522 KRTAP19-1Q8IUB9 90 aa6.08□□□□□ -1.44
CTSA-209ENST00000493522 Q8N9L7 120 aa6.08□□□□□ -1.44
CTSA-209ENST00000493522 KRTAP19-2Q3LHN2 52 aa6.06□□□□□ -1.44
CTSA-209ENST00000493522 TMEM254Q8TBM7 123 aa6.06□□□□□ -1.44
CTSA-209ENST00000493522 hDV103S1A0JD37 113 aa6.04□□□□□ -1.44
CTSA-209ENST00000493522 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
CTSA-209ENST00000493522 ACYP1P07311 99 aa6.03□□□□□ -1.44
CTSA-209ENST00000493522 WFDC13Q8IUB5 93 aa6.03□□□□□ -1.44
CTSA-209ENST00000493522 Q8N9P0 234 aaPredicted RBP6.03□□□□□ -1.44
CTSA-209ENST00000493522 FAM240AA0A1B0GVK7 77 aa6.02□□□□□ -1.45
CTSA-209ENST00000493522 ZCCHC13Q8WW36 166 aaKnown RBP6.02□□□□□ -1.45
CTSA-209ENST00000493522 NDUFS5O43920 106 aa6.01□□□□□ -1.45
CTSA-209ENST00000493522 CASC2Q6XLA1 102 aa6.01□□□□□ -1.45
CTSA-209ENST00000493522 KRTAP10-6P60371 365 aaPredicted RBP6□□□□□ -1.45
CTSA-209ENST00000493522 CXCL6P80162 114 aa6□□□□□ -1.45
CTSA-209ENST00000493522 FLGP20930 4061 aaPredicted RBP6□□□□□ -1.45
CTSA-209ENST00000493522 M0R2T5 61 aa5.99□□□□□ -1.45
CTSA-209ENST00000493522 COX6B2Q6YFQ2 88 aa5.99□□□□□ -1.45
CTSA-209ENST00000493522 HCG22E2RYF7 251 aa5.98□□□□□ -1.45
CTSA-209ENST00000493522 LCE3BQ5TA77 95 aa5.98□□□□□ -1.45
CTSA-209ENST00000493522 ATP5EP2Q5VTU8 51 aa5.95□□□□□ -1.46
CTSA-209ENST00000493522 J3QR89 54 aa5.93□□□□□ -1.46
CTSA-209ENST00000493522 KRTAP9-9Q9BYP9 154 aa5.93□□□□□ -1.46
CTSA-209ENST00000493522 KRTAP9-4Q9BYQ2 154 aa5.93□□□□□ -1.46
CTSA-209ENST00000493522 FAM236DA0A1B0GTK5 79 aa5.91□□□□□ -1.46
CTSA-209ENST00000493522 FAM236CP0DP71 79 aa5.91□□□□□ -1.46
CTSA-209ENST00000493522 HRES1P13985 223 aa5.91□□□□□ -1.46
CTSA-209ENST00000493522 SPINK7P58062 85 aa5.91□□□□□ -1.46
CTSA-209ENST00000493522 HIST1H4AP62805 103 aaKnown RBP5.9□□□□□ -1.46
CTSA-209ENST00000493522 LINC00643Q86TS7 51 aa5.9□□□□□ -1.46
CTSA-209ENST00000493522 RBM12B-AS1Q9P1G2 102 aa5.89□□□□□ -1.47
CTSA-209ENST00000493522 Q5W150 140 aa5.88□□□□□ -1.47
CTSA-209ENST00000493522 USH2AO75445 5202 aa5.87□□□□□ -1.47
CTSA-209ENST00000493522 IGKV2D-30A0A075B6S6 120 aa5.86□□□□□ -1.47
CTSA-209ENST00000493522 IGKV2-30P06310 120 aa5.86□□□□□ -1.47
CTSA-209ENST00000493522 MPLKIPQ8TAP9 179 aa5.85□□□□□ -1.47
CTSA-209ENST00000493522 SSPOA2VEC9 5147 aa5.84□□□□□ -1.47
CTSA-209ENST00000493522 C7orf65Q6ZTY9 151 aa5.84□□□□□ -1.47
CTSA-209ENST00000493522 A0A087WVE0 104 aa5.83□□□□□ -1.48
CTSA-209ENST00000493522 TP53AIP1Q9HCN2 124 aa5.83□□□□□ -1.48
CTSA-209ENST00000493522 KRTAP9-7A8MTY7 169 aa5.81□□□□□ -1.48
CTSA-209ENST00000493522 K7ERU9 68 aa5.8□□□□□ -1.48
CTSA-209ENST00000493522 KRTAP4-8A0A0G2JLE6 195 aa5.79□□□□□ -1.48
CTSA-209ENST00000493522 TRAV22A0A0B4J277 110 aa5.75□□□□□ -1.49
CTSA-209ENST00000493522 UQCRQO14949 82 aa5.73□□□□□ -1.49
CTSA-209ENST00000493522 FCGBPQ9Y6R7 5405 aaPredicted RBP5.72□□□□□ -1.49
CTSA-209ENST00000493522 H0Y9P7 68 aa5.71□□□□□ -1.5
CTSA-209ENST00000493522 C4orf26Q17RF5 130 aa5.71□□□□□ -1.5
CTSA-209ENST00000493522 LOC101927531A0A1B0GV80 90 aa5.7□□□□□ -1.5
CTSA-209ENST00000493522 MT-ATP8P03928 68 aa5.7□□□□□ -1.5
CTSA-209ENST00000493522 KRTAP9-8Q9BYQ0 159 aa5.69□□□□□ -1.5
CTSA-209ENST00000493522 ATOX1O00244 68 aa5.68□□□□□ -1.5
CTSA-209ENST00000493522 H1FX-AS1Q4G0G2 97 aa5.68□□□□□ -1.5
CTSA-209ENST00000493522 MACF1Q9UPN3 7388 aaKnown RBP5.68□□□□□ -1.5
CTSA-209ENST00000493522 H3BS24 57 aa5.67□□□□□ -1.5
CTSA-209ENST00000493522 SCGB1A1P11684 91 aa5.67□□□□□ -1.5
CTSA-209ENST00000493522 OCR1Q9BZK8 76 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms