RNA–Protein interactions for RNA: ENST00000493426.1

EWSR1-220, Transcript of EWS RNA binding protein 1, humanhuman

TSL 3

Gene EWSR1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-220ENST00000493426 KRTAP19-1Q8IUB9 90 aa4.09□□□□□ -1.75
EWSR1-220ENST00000493426 KRTAP13-1Q8IUC0 172 aa4.08□□□□□ -1.76
EWSR1-220ENST00000493426 LINC00483Q53H64 154 aa4.07□□□□□ -1.76
EWSR1-220ENST00000493426 CASC10Q5T4H9 136 aa4.07□□□□□ -1.76
EWSR1-220ENST00000493426 TRRAPQ9Y4A5 3859 aa4.06□□□□□ -1.76
EWSR1-220ENST00000493426 A0A096LNI7 61 aa4.06□□□□□ -1.76
EWSR1-220ENST00000493426 DMAC1Q96GE9 116 aa4.06□□□□□ -1.76
EWSR1-220ENST00000493426 NOTCH1P46531 2555 aa4.05□□□□□ -1.76
EWSR1-220ENST00000493426 C14orf177Q52M58 125 aa4.04□□□□□ -1.76
EWSR1-220ENST00000493426 CDK2AP2O75956 126 aa4.03□□□□□ -1.76
EWSR1-220ENST00000493426 KRTAP11-1Q8IUC1 163 aa4.03□□□□□ -1.76
EWSR1-220ENST00000493426 RETNLBQ9BQ08 111 aa4.03□□□□□ -1.76
EWSR1-220ENST00000493426 TGP01266 2768 aa4.02□□□□□ -1.77
EWSR1-220ENST00000493426 IGHV6-1A0A0B4J1U7 121 aa4.02□□□□□ -1.77
EWSR1-220ENST00000493426 CHTF8P0CG12 524 aa4.02□□□□□ -1.77
EWSR1-220ENST00000493426 KRTAP10-11P60412 298 aa4.02□□□□□ -1.77
EWSR1-220ENST00000493426 PRAC1Q96KF2 57 aa4.02□□□□□ -1.77
EWSR1-220ENST00000493426 CMYA5Q8N3K9 4069 aa4.02□□□□□ -1.77
EWSR1-220ENST00000493426 A0A1B0GU69 56 aa4.01□□□□□ -1.77
EWSR1-220ENST00000493426 UQCR11O14957 56 aa4.01□□□□□ -1.77
EWSR1-220ENST00000493426 ZNF706Q9Y5V0 76 aaPredicted RBP4.01□□□□□ -1.77
EWSR1-220ENST00000493426 MIR22HGQ0VDD5 57 aa4□□□□□ -1.77
EWSR1-220ENST00000493426 Q5W150 140 aa4□□□□□ -1.77
EWSR1-220ENST00000493426 ADM2Q7Z4H4 148 aa3.98□□□□□ -1.77
EWSR1-220ENST00000493426 NOTCH2NLQ7Z3S9 236 aa3.97□□□□□ -1.77
EWSR1-220ENST00000493426 WWC2-AS2Q96NR7 200 aa3.97□□□□□ -1.77
EWSR1-220ENST00000493426 NBEAL2Q6ZNJ1 2754 aa3.97□□□□□ -1.77
EWSR1-220ENST00000493426 IGKV2-30P06310 120 aa3.96□□□□□ -1.78
EWSR1-220ENST00000493426 DNAH3Q8TD57 4116 aa3.96□□□□□ -1.78
EWSR1-220ENST00000493426 ZNF861PO60384 105 aa3.95□□□□□ -1.78
EWSR1-220ENST00000493426 PRKDCP78527 4128 aaKnown RBP3.94□□□□□ -1.78
EWSR1-220ENST00000493426 COL7A1Q02388 2944 aa3.94□□□□□ -1.78
EWSR1-220ENST00000493426 K7EIL1 84 aa3.94□□□□□ -1.78
EWSR1-220ENST00000493426 IGLV7-43P04211 117 aa3.92□□□□□ -1.78
EWSR1-220ENST00000493426 CSAG1Q6PB30 78 aa3.92□□□□□ -1.78
EWSR1-220ENST00000493426 KRTAP9-9Q9BYP9 154 aa3.92□□□□□ -1.78
EWSR1-220ENST00000493426 KRTAP9-4Q9BYQ2 154 aa3.92□□□□□ -1.78
EWSR1-220ENST00000493426 IGLV9-49A0A0B4J1Y8 123 aa3.91□□□□□ -1.78
EWSR1-220ENST00000493426 SSBP3-AS1Q7Z2R9 100 aa3.91□□□□□ -1.78
EWSR1-220ENST00000493426 KRTAP1-5Q9BYS1 174 aa3.91□□□□□ -1.78
EWSR1-220ENST00000493426 SPACA4Q8TDM5 124 aa3.9□□□□□ -1.79
EWSR1-220ENST00000493426 TENM3Q9P273 2699 aa3.89□□□□□ -1.79
EWSR1-220ENST00000493426 IGKV2D-30A0A075B6S6 120 aa3.89□□□□□ -1.79
EWSR1-220ENST00000493426 DNAH1Q9P2D7 4330 aa3.88□□□□□ -1.79
EWSR1-220ENST00000493426 ALMS1Q8TCU4 4167 aa3.88□□□□□ -1.79
EWSR1-220ENST00000493426 IGLV5-52A0A0A0MRZ9 124 aa3.87□□□□□ -1.79
EWSR1-220ENST00000493426 KRTAP25-1Q3LHN0 102 aa3.87□□□□□ -1.79
EWSR1-220ENST00000493426 APLNQ9ULZ1 77 aa3.87□□□□□ -1.79
EWSR1-220ENST00000493426 STAB2Q8WWQ8 2551 aa3.86□□□□□ -1.79
EWSR1-220ENST00000493426 A8MUU9 505 aa3.86□□□□□ -1.79
EWSR1-220ENST00000493426 KRTAP16-1A8MUX0 517 aa3.86□□□□□ -1.79
EWSR1-220ENST00000493426 PANO1I0J062 215 aa3.86□□□□□ -1.79
EWSR1-220ENST00000493426 LY6G6CO95867 125 aa3.86□□□□□ -1.79
EWSR1-220ENST00000493426 Q6ZRN7 208 aaPredicted RBP3.86□□□□□ -1.79
EWSR1-220ENST00000493426 KRTAP4-8A0A0G2JLE6 195 aa3.85□□□□□ -1.79
EWSR1-220ENST00000493426 NUPR2A6NF83 97 aa3.84□□□□□ -1.79
EWSR1-220ENST00000493426 ROMO1P60602 79 aa3.84□□□□□ -1.79
EWSR1-220ENST00000493426 C1orf134Q5TEV5 83 aa3.84□□□□□ -1.79
EWSR1-220ENST00000493426 PSORS1C2Q9UIG4 136 aa3.84□□□□□ -1.79
EWSR1-220ENST00000493426 LCE1DQ5T752 114 aa3.83□□□□□ -1.8
EWSR1-220ENST00000493426 NBDYA0A0U1RRE5 68 aa3.82□□□□□ -1.8
EWSR1-220ENST00000493426 UBE2DNLQ8IWF7 75 aa3.82□□□□□ -1.8
EWSR1-220ENST00000493426 SPINK6Q6UWN8 80 aa3.81□□□□□ -1.8
EWSR1-220ENST00000493426 DNAH7Q8WXX0 4024 aa3.8□□□□□ -1.8
EWSR1-220ENST00000493426 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
EWSR1-220ENST00000493426 Q6ZSA8 131 aa3.8□□□□□ -1.8
EWSR1-220ENST00000493426 LINC00304Q8N9R0 145 aa3.8□□□□□ -1.8
EWSR1-220ENST00000493426 ANAPC11Q9NYG5 84 aa3.8□□□□□ -1.8
EWSR1-220ENST00000493426 TENM2Q9NT68 2774 aa3.8□□□□□ -1.8
EWSR1-220ENST00000493426 DNAH9Q9NYC9 4486 aa3.79□□□□□ -1.8
EWSR1-220ENST00000493426 H0YAA0 97 aa3.78□□□□□ -1.8
EWSR1-220ENST00000493426 A0A087WTM6 91 aa3.77□□□□□ -1.81
EWSR1-220ENST00000493426 KRTAP9-7A8MTY7 169 aa3.77□□□□□ -1.81
EWSR1-220ENST00000493426 CIRBP-AS1Q8TBR5 109 aa3.77□□□□□ -1.81
EWSR1-220ENST00000493426 KMT2CQ8NEZ4 4911 aaKnown RBP3.77□□□□□ -1.81
EWSR1-220ENST00000493426 CSMD3Q7Z407 3707 aa3.76□□□□□ -1.81
EWSR1-220ENST00000493426 A0A1B0GU33 70 aa3.75□□□□□ -1.81
EWSR1-220ENST00000493426 HUWE1Q7Z6Z7 4374 aaKnown RBP3.74□□□□□ -1.81
EWSR1-220ENST00000493426 H1FX-AS1Q4G0G2 97 aa3.74□□□□□ -1.81
EWSR1-220ENST00000493426 LYSTQ99698 3801 aa3.73□□□□□ -1.81
EWSR1-220ENST00000493426 KRTAP4-7Q9BYR0 210 aa3.72□□□□□ -1.81
EWSR1-220ENST00000493426 K7ERS5 55 aa3.71□□□□□ -1.82
EWSR1-220ENST00000493426 KRTAP3-1Q9BYR8 98 aa3.71□□□□□ -1.82
EWSR1-220ENST00000493426 DYNC2H1Q8NCM8 4307 aaKnown RBP3.71□□□□□ -1.82
EWSR1-220ENST00000493426 RYR3Q15413 4870 aa3.7□□□□□ -1.82
EWSR1-220ENST00000493426 KRTAP13-2Q52LG2 175 aa3.7□□□□□ -1.82
EWSR1-220ENST00000493426 KRTAP23-1A1A580 65 aa3.69□□□□□ -1.82
EWSR1-220ENST00000493426 P0C880 135 aa3.69□□□□□ -1.82
EWSR1-220ENST00000493426 RPS29P62273 56 aaKnown RBP3.69□□□□□ -1.82
EWSR1-220ENST00000493426 STARD9Q9P2P6 4700 aa3.68□□□□□ -1.82
EWSR1-220ENST00000493426 RYR2Q92736 4967 aa3.67□□□□□ -1.82
EWSR1-220ENST00000493426 SPINK1P00995 79 aa3.67□□□□□ -1.82
EWSR1-220ENST00000493426 TYMSOSQ8TAI1 123 aa3.67□□□□□ -1.82
EWSR1-220ENST00000493426 KRTAP4-9Q9BYQ8 210 aa3.67□□□□□ -1.82
EWSR1-220ENST00000493426 DNAH8Q96JB1 4490 aa3.67□□□□□ -1.82
EWSR1-220ENST00000493426 COX6B2Q6YFQ2 88 aa3.66□□□□□ -1.82
EWSR1-220ENST00000493426 SRRM2Q9UQ35 2752 aaKnown RBP3.66□□□□□ -1.82
EWSR1-220ENST00000493426 KRTAP10-2P60368 255 aa3.65□□□□□ -1.83
EWSR1-220ENST00000493426 LCE5AQ5TCM9 118 aa3.65□□□□□ -1.83
EWSR1-220ENST00000493426 Q8N1X5 172 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms