RNA–Protein interactions for RNA: ENST00000493177.1

MSH6-208, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 813 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-208ENST00000493177 BPY2O14599 106 aa7.47□□□□□ -1.21
MSH6-208ENST00000493177 K7ERU9 68 aa7.46□□□□□ -1.22
MSH6-208ENST00000493177 NDUFB1O75438 58 aa7.44□□□□□ -1.22
MSH6-208ENST00000493177 IGHV6-1A0A0B4J1U7 121 aa7.42□□□□□ -1.22
MSH6-208ENST00000493177 C9orf92A6NGG3 77 aa7.42□□□□□ -1.22
MSH6-208ENST00000493177 A8MWP4 228 aa7.41□□□□□ -1.22
MSH6-208ENST00000493177 A0A1B0GVX0 72 aa7.4□□□□□ -1.22
MSH6-208ENST00000493177 DSCR10P59022 87 aa7.4□□□□□ -1.22
MSH6-208ENST00000493177 KRTAP13-3Q3SY46 172 aa7.4□□□□□ -1.22
MSH6-208ENST00000493177 IGKV3D-7A0A0C4DH55 119 aa7.39□□□□□ -1.23
MSH6-208ENST00000493177 K7EQZ3 153 aa7.38□□□□□ -1.23
MSH6-208ENST00000493177 LINC00643Q86TS7 51 aa7.38□□□□□ -1.23
MSH6-208ENST00000493177 CXCL6P80162 114 aa7.37□□□□□ -1.23
MSH6-208ENST00000493177 PRR15Q8IV56 129 aa7.37□□□□□ -1.23
MSH6-208ENST00000493177 Q8N9L7 120 aa7.37□□□□□ -1.23
MSH6-208ENST00000493177 C8orf87E5RJ46 101 aa7.36□□□□□ -1.23
MSH6-208ENST00000493177 LINC00313P59037 77 aa7.36□□□□□ -1.23
MSH6-208ENST00000493177 ATP5EP2Q5VTU8 51 aa7.36□□□□□ -1.23
MSH6-208ENST00000493177 SEC61BP60468 96 aaKnown RBP7.34□□□□□ -1.23
MSH6-208ENST00000493177 C8orf17Q9NRJ1 99 aa7.34□□□□□ -1.23
MSH6-208ENST00000493177 NOTCH2NLQ7Z3S9 236 aa7.33□□□□□ -1.24
MSH6-208ENST00000493177 MUC17Q685J3 4493 aa7.33□□□□□ -1.24
MSH6-208ENST00000493177 HIST1H4AP62805 103 aaKnown RBP7.31□□□□□ -1.24
MSH6-208ENST00000493177 XP32Q5T750 250 aa7.3□□□□□ -1.24
MSH6-208ENST00000493177 MMP24-AS1A0A0U1RRL7 71 aa7.29□□□□□ -1.24
MSH6-208ENST00000493177 WFDC13Q8IUB5 93 aa7.28□□□□□ -1.24
MSH6-208ENST00000493177 hDV103S1A0JD37 113 aa7.27□□□□□ -1.25
MSH6-208ENST00000493177 MUC2Q02817 5179 aa7.26□□□□□ -1.25
MSH6-208ENST00000493177 KRTAP16-1A8MUX0 517 aa7.26□□□□□ -1.25
MSH6-208ENST00000493177 HCG22E2RYF7 251 aa7.26□□□□□ -1.25
MSH6-208ENST00000493177 CASC2Q6XLA1 102 aa7.26□□□□□ -1.25
MSH6-208ENST00000493177 TMEM254Q8TBM7 123 aa7.25□□□□□ -1.25
MSH6-208ENST00000493177 MT-ATP8P03928 68 aa7.24□□□□□ -1.25
MSH6-208ENST00000493177 MRPL34Q9BQ48 92 aaKnown RBP7.24□□□□□ -1.25
MSH6-208ENST00000493177 A0A087WVE0 104 aa7.22□□□□□ -1.25
MSH6-208ENST00000493177 NDUFS5O43920 106 aa7.22□□□□□ -1.25
MSH6-208ENST00000493177 RPL37P61927 97 aaKnown RBP7.22□□□□□ -1.25
MSH6-208ENST00000493177 C20orf166-AS1Q96NR2 134 aa7.22□□□□□ -1.25
MSH6-208ENST00000493177 A8MUU9 505 aa7.21□□□□□ -1.26
MSH6-208ENST00000493177 Q75L30 129 aa7.21□□□□□ -1.26
MSH6-208ENST00000493177 PCOTHQ58A44 107 aa7.18□□□□□ -1.26
MSH6-208ENST00000493177 Q8N9P0 234 aaPredicted RBP7.18□□□□□ -1.26
MSH6-208ENST00000493177 ATP11AUNQ6ZP68 121 aa7.17□□□□□ -1.26
MSH6-208ENST00000493177 IMUPQ9GZP8 106 aa7.17□□□□□ -1.26
MSH6-208ENST00000493177 KRTAP4-1Q9BYQ7 146 aa7.16□□□□□ -1.26
MSH6-208ENST00000493177 LCE2AQ5TA79 106 aaPredicted RBP7.15□□□□□ -1.26
MSH6-208ENST00000493177 FAT4Q6V0I7 4981 aa7.13□□□□□ -1.27
MSH6-208ENST00000493177 ZCCHC13Q8WW36 166 aaKnown RBP7.11□□□□□ -1.27
MSH6-208ENST00000493177 SCGB1A1P11684 91 aa7.1□□□□□ -1.27
MSH6-208ENST00000493177 FAM236AA0A1B0GUQ0 79 aa7.08□□□□□ -1.28
MSH6-208ENST00000493177 FAM236BA0A1B0GV22 79 aa7.08□□□□□ -1.28
MSH6-208ENST00000493177 TP53AIP1Q9HCN2 124 aa7.08□□□□□ -1.28
MSH6-208ENST00000493177 Q5W150 140 aa7.04□□□□□ -1.28
MSH6-208ENST00000493177 UQCRQO14949 82 aa7.02□□□□□ -1.29
MSH6-208ENST00000493177 COX6B2Q6YFQ2 88 aa7.01□□□□□ -1.29
MSH6-208ENST00000493177 KRTAP9-2Q9BYQ4 174 aa7.01□□□□□ -1.29
MSH6-208ENST00000493177 OCR1Q9BZK8 76 aa7□□□□□ -1.29
MSH6-208ENST00000493177 TRAV22A0A0B4J277 110 aa6.98□□□□□ -1.29
MSH6-208ENST00000493177 ATOX1O00244 68 aa6.98□□□□□ -1.29
MSH6-208ENST00000493177 IGKV2D-30A0A075B6S6 120 aa6.97□□□□□ -1.29
MSH6-208ENST00000493177 H0Y9P7 68 aa6.97□□□□□ -1.29
MSH6-208ENST00000493177 IGKV2-30P06310 120 aa6.97□□□□□ -1.29
MSH6-208ENST00000493177 SMIM20Q8N5G0 67 aa6.97□□□□□ -1.29
MSH6-208ENST00000493177 SPINK7P58062 85 aa6.96□□□□□ -1.3
MSH6-208ENST00000493177 MP68P56378 58 aa6.94□□□□□ -1.3
MSH6-208ENST00000493177 C7orf65Q6ZTY9 151 aa6.94□□□□□ -1.3
MSH6-208ENST00000493177 TRAV7A0A075B6U4 112 aa6.93□□□□□ -1.3
MSH6-208ENST00000493177 M0R2T5 61 aa6.93□□□□□ -1.3
MSH6-208ENST00000493177 LCE2CQ5TA81 110 aa6.93□□□□□ -1.3
MSH6-208ENST00000493177 KRTAP19-2Q3LHN2 52 aa6.92□□□□□ -1.3
MSH6-208ENST00000493177 C5orf47Q569G3 176 aa6.92□□□□□ -1.3
MSH6-208ENST00000493177 MT1HP80294 61 aa6.91□□□□□ -1.3
MSH6-208ENST00000493177 LOC101927531A0A1B0GV80 90 aa6.9□□□□□ -1.3
MSH6-208ENST00000493177 LINC00208Q96KT6 92 aa6.9□□□□□ -1.3
MSH6-208ENST00000493177 C1orf64Q8NEQ6 169 aa6.89□□□□□ -1.31
MSH6-208ENST00000493177 SERP2Q8N6R1 65 aa6.87□□□□□ -1.31
MSH6-208ENST00000493177 H3BPC8 53 aa6.86□□□□□ -1.31
MSH6-208ENST00000493177 HRES1P13985 223 aa6.86□□□□□ -1.31
MSH6-208ENST00000493177 CYP4F30PQ9H0H9 118 aa6.85□□□□□ -1.31
MSH6-208ENST00000493177 RBM12B-AS1Q9P1G2 102 aa6.84□□□□□ -1.31
MSH6-208ENST00000493177 ANAPC13Q9BS18 74 aa6.83□□□□□ -1.32
MSH6-208ENST00000493177 FAM236DA0A1B0GTK5 79 aa6.82□□□□□ -1.32
MSH6-208ENST00000493177 FAM236CP0DP71 79 aa6.82□□□□□ -1.32
MSH6-208ENST00000493177 COX7CP15954 63 aa6.79□□□□□ -1.32
MSH6-208ENST00000493177 LCE2DQ5TA82 110 aaPredicted RBP6.79□□□□□ -1.32
MSH6-208ENST00000493177 C20orf197Q8N268 126 aa6.79□□□□□ -1.32
MSH6-208ENST00000493177 KRTAP9-6A0A140TA67 174 aa6.78□□□□□ -1.32
MSH6-208ENST00000493177 KRTAP10-6P60371 365 aaPredicted RBP6.78□□□□□ -1.32
MSH6-208ENST00000493177 C4orf26Q17RF5 130 aa6.78□□□□□ -1.32
MSH6-208ENST00000493177 MPLKIPQ8TAP9 179 aa6.78□□□□□ -1.32
MSH6-208ENST00000493177 SNURFQ9Y675 71 aa6.78□□□□□ -1.32
MSH6-208ENST00000493177 KLKP1Q107X0 134 aa6.77□□□□□ -1.33
MSH6-208ENST00000493177 LORP23490 312 aaPredicted RBP6.75□□□□□ -1.33
MSH6-208ENST00000493177 FLGP20930 4061 aaPredicted RBP6.69□□□□□ -1.34
MSH6-208ENST00000493177 H1FX-AS1Q4G0G2 97 aa6.67□□□□□ -1.34
MSH6-208ENST00000493177 CCDC179H3BU77 68 aa6.66□□□□□ -1.34
MSH6-208ENST00000493177 KRTAP3-1Q9BYR8 98 aa6.64□□□□□ -1.35
MSH6-208ENST00000493177 CRCT1Q9UGL9 99 aa6.63□□□□□ -1.35
MSH6-208ENST00000493177 NDUFC1O43677 76 aa6.62□□□□□ -1.35
MSH6-208ENST00000493177 A8MUN3 132 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms