RNA–Protein interactions for RNA: ENST00000491915.1

COL6A4P1-203, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 5

Gene COL6A4P1, Length 1,251 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-203ENST00000491915 COX6CP09669 75 aa4.6□□□□□ -1.67
COL6A4P1-203ENST00000491915 DEFB116Q30KQ4 102 aa4.6□□□□□ -1.67
COL6A4P1-203ENST00000491915 COX6B2Q6YFQ2 88 aa4.6□□□□□ -1.67
COL6A4P1-203ENST00000491915 TRBV7-4A0A0J9YYF1 115 aa4.59□□□□□ -1.67
COL6A4P1-203ENST00000491915 DNAL4O96015 105 aa4.59□□□□□ -1.67
COL6A4P1-203ENST00000491915 SCGB1C2P0DMR2 95 aa4.59□□□□□ -1.67
COL6A4P1-203ENST00000491915 LINC00472Q9H8W2 130 aa4.59□□□□□ -1.67
COL6A4P1-203ENST00000491915 FLGP20930 4061 aaPredicted RBP4.59□□□□□ -1.68
COL6A4P1-203ENST00000491915 H3BQ85 93 aa4.58□□□□□ -1.68
COL6A4P1-203ENST00000491915 TRACP01848 142 aa4.58□□□□□ -1.68
COL6A4P1-203ENST00000491915 IGKV4-1P06312 121 aa4.58□□□□□ -1.68
COL6A4P1-203ENST00000491915 M0R2T5 61 aa4.57□□□□□ -1.68
COL6A4P1-203ENST00000491915 CCKP06307 115 aa4.57□□□□□ -1.68
COL6A4P1-203ENST00000491915 BAALC-AS2P0C853 105 aa4.57□□□□□ -1.68
COL6A4P1-203ENST00000491915 LINC00313P59037 77 aa4.56□□□□□ -1.68
COL6A4P1-203ENST00000491915 FAM236DA0A1B0GTK5 79 aa4.55□□□□□ -1.68
COL6A4P1-203ENST00000491915 FAM236CP0DP71 79 aa4.55□□□□□ -1.68
COL6A4P1-203ENST00000491915 RBM3P98179 157 aaKnown RBP4.55□□□□□ -1.68
COL6A4P1-203ENST00000491915 PMAIP1Q13794 54 aa4.55□□□□□ -1.68
COL6A4P1-203ENST00000491915 NAA38Q9BRA0 125 aaKnown RBP4.55□□□□□ -1.68
COL6A4P1-203ENST00000491915 ANAPC13Q9BS18 74 aa4.55□□□□□ -1.68
COL6A4P1-203ENST00000491915 CRCT1Q9UGL9 99 aa4.55□□□□□ -1.68
COL6A4P1-203ENST00000491915 C9JAW5 83 aa4.54□□□□□ -1.68
COL6A4P1-203ENST00000491915 GTF2H5Q6ZYL4 71 aa4.53□□□□□ -1.68
COL6A4P1-203ENST00000491915 IGHV6-1A0A0B4J1U7 121 aa4.52□□□□□ -1.69
COL6A4P1-203ENST00000491915 J3QR89 54 aa4.52□□□□□ -1.69
COL6A4P1-203ENST00000491915 BATFQ16520 125 aa4.52□□□□□ -1.69
COL6A4P1-203ENST00000491915 DSCR8Q96T75 97 aa4.51□□□□□ -1.69
COL6A4P1-203ENST00000491915 Q6ZVQ6 151 aa4.5□□□□□ -1.69
COL6A4P1-203ENST00000491915 Q6ZQT0 140 aa4.49□□□□□ -1.69
COL6A4P1-203ENST00000491915 KRTAP9-8Q9BYQ0 159 aa4.49□□□□□ -1.69
COL6A4P1-203ENST00000491915 TRBV20-1A0A075B6N2 111 aa4.48□□□□□ -1.69
COL6A4P1-203ENST00000491915 A0A1B0GVX0 72 aa4.48□□□□□ -1.69
COL6A4P1-203ENST00000491915 HRES1P13985 223 aa4.48□□□□□ -1.69
COL6A4P1-203ENST00000491915 ATXN8Q156A1 80 aa4.48□□□□□ -1.69
COL6A4P1-203ENST00000491915 MPLKIPQ8TAP9 179 aa4.47□□□□□ -1.69
COL6A4P1-203ENST00000491915 C8orf87E5RJ46 101 aa4.46□□□□□ -1.7
COL6A4P1-203ENST00000491915 LOC110117498A0A087WWA1 95 aa4.45□□□□□ -1.7
COL6A4P1-203ENST00000491915 JMJD7-PLA2G4BH0Y9G9 81 aa4.44□□□□□ -1.7
COL6A4P1-203ENST00000491915 LYRM7Q5U5X0 104 aa4.44□□□□□ -1.7
COL6A4P1-203ENST00000491915 C14orf132Q9NPU4 83 aa4.44□□□□□ -1.7
COL6A4P1-203ENST00000491915 IGKV3D-7A0A0C4DH55 119 aa4.43□□□□□ -1.7
COL6A4P1-203ENST00000491915 FSIP2Q5CZC0 6907 aa4.43□□□□□ -1.7
COL6A4P1-203ENST00000491915 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
COL6A4P1-203ENST00000491915 ZCCHC13Q8WW36 166 aaKnown RBP4.42□□□□□ -1.7
COL6A4P1-203ENST00000491915 C8orf17Q9NRJ1 99 aa4.42□□□□□ -1.7
COL6A4P1-203ENST00000491915 A8MWP4 228 aa4.41□□□□□ -1.7
COL6A4P1-203ENST00000491915 TAX1BP3O14907 124 aa4.41□□□□□ -1.7
COL6A4P1-203ENST00000491915 NDUFB1O75438 58 aa4.41□□□□□ -1.7
COL6A4P1-203ENST00000491915 PDE6GP18545 87 aa4.41□□□□□ -1.7
COL6A4P1-203ENST00000491915 SPINK7P58062 85 aa4.41□□□□□ -1.7
COL6A4P1-203ENST00000491915 A0A1B0GW54 56 aa4.4□□□□□ -1.71
COL6A4P1-203ENST00000491915 C9orf118A6NHY6 69 aa4.4□□□□□ -1.71
COL6A4P1-203ENST00000491915 MT2AP02795 61 aa4.4□□□□□ -1.71
COL6A4P1-203ENST00000491915 RBM12B-AS1Q9P1G2 102 aa4.4□□□□□ -1.71
COL6A4P1-203ENST00000491915 PRR15Q8IV56 129 aa4.39□□□□□ -1.71
COL6A4P1-203ENST00000491915 CCDC179H3BU77 68 aa4.38□□□□□ -1.71
COL6A4P1-203ENST00000491915 NREPQ16612 68 aa4.38□□□□□ -1.71
COL6A4P1-203ENST00000491915 NDUFS5O43920 106 aa4.37□□□□□ -1.71
COL6A4P1-203ENST00000491915 MT1FP04733 61 aa4.37□□□□□ -1.71
COL6A4P1-203ENST00000491915 A0A1W2PPM0 123 aa4.36□□□□□ -1.71
COL6A4P1-203ENST00000491915 KRTAP9-3Q9BYQ3 159 aa4.36□□□□□ -1.71
COL6A4P1-203ENST00000491915 MMP24-AS1A0A0U1RRL7 71 aa4.35□□□□□ -1.71
COL6A4P1-203ENST00000491915 H3BT86 120 aa4.34□□□□□ -1.71
COL6A4P1-203ENST00000491915 LCE2BO14633 110 aa4.34□□□□□ -1.71
COL6A4P1-203ENST00000491915 KRTAP10-10P60014 251 aa4.33□□□□□ -1.72
COL6A4P1-203ENST00000491915 MRPL34Q9BQ48 92 aaKnown RBP4.33□□□□□ -1.72
COL6A4P1-203ENST00000491915 IMUPQ9GZP8 106 aa4.33□□□□□ -1.72
COL6A4P1-203ENST00000491915 K7EQZ3 153 aa4.32□□□□□ -1.72
COL6A4P1-203ENST00000491915 Q5W150 140 aa4.32□□□□□ -1.72
COL6A4P1-203ENST00000491915 TMEM254Q8TBM7 123 aa4.32□□□□□ -1.72
COL6A4P1-203ENST00000491915 FAM236AA0A1B0GUQ0 79 aa4.31□□□□□ -1.72
COL6A4P1-203ENST00000491915 FAM236BA0A1B0GV22 79 aa4.31□□□□□ -1.72
COL6A4P1-203ENST00000491915 hDV103S1A0JD37 113 aa4.31□□□□□ -1.72
COL6A4P1-203ENST00000491915 WFDC13Q8IUB5 93 aa4.31□□□□□ -1.72
COL6A4P1-203ENST00000491915 TMEM258P61165 79 aa4.3□□□□□ -1.72
COL6A4P1-203ENST00000491915 SPCS1Q9Y6A9 102 aa4.3□□□□□ -1.72
COL6A4P1-203ENST00000491915 USH2AO75445 5202 aa4.3□□□□□ -1.72
COL6A4P1-203ENST00000491915 BPY2O14599 106 aa4.29□□□□□ -1.72
COL6A4P1-203ENST00000491915 Q8N9L7 120 aa4.29□□□□□ -1.72
COL6A4P1-203ENST00000491915 MP68P56378 58 aa4.28□□□□□ -1.72
COL6A4P1-203ENST00000491915 BRK1Q8WUW1 75 aa4.28□□□□□ -1.72
COL6A4P1-203ENST00000491915 PRO0461Q9UI25 63 aa4.28□□□□□ -1.72
COL6A4P1-203ENST00000491915 SSPOA2VEC9 5147 aa4.27□□□□□ -1.73
COL6A4P1-203ENST00000491915 PSPHP1O15172 72 aa4.27□□□□□ -1.73
COL6A4P1-203ENST00000491915 KTN1-AS1Q86SY8 53 aa4.27□□□□□ -1.73
COL6A4P1-203ENST00000491915 SMIM26A0A096LP01 95 aa4.26□□□□□ -1.73
COL6A4P1-203ENST00000491915 K7EP34 96 aa4.26□□□□□ -1.73
COL6A4P1-203ENST00000491915 UQCRQO14949 82 aa4.25□□□□□ -1.73
COL6A4P1-203ENST00000491915 LINC00846Q9NV44 126 aa4.25□□□□□ -1.73
COL6A4P1-203ENST00000491915 IGKV2D-30A0A075B6S6 120 aa4.24□□□□□ -1.73
COL6A4P1-203ENST00000491915 IGKV2-30P06310 120 aa4.24□□□□□ -1.73
COL6A4P1-203ENST00000491915 H1FX-AS1Q4G0G2 97 aa4.24□□□□□ -1.73
COL6A4P1-203ENST00000491915 KRTAP19-1Q8IUB9 90 aa4.24□□□□□ -1.73
COL6A4P1-203ENST00000491915 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.23□□□□□ -1.73
COL6A4P1-203ENST00000491915 HCG22E2RYF7 251 aa4.23□□□□□ -1.73
COL6A4P1-203ENST00000491915 MT-ATP8P03928 68 aa4.23□□□□□ -1.73
COL6A4P1-203ENST00000491915 CASC2Q6XLA1 102 aa4.23□□□□□ -1.73
COL6A4P1-203ENST00000491915 A8MUN3 132 aa4.21□□□□□ -1.74
COL6A4P1-203ENST00000491915 F8W1H4 67 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms