RNA–Protein interactions for RNA: ENST00000491824.1

HCLS1-210, Transcript of hematopoietic cell-specific Lyn substrate 1, humanhuman

TSL 3

Gene HCLS1, Length 646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCLS1-210ENST00000491824 MUC2Q02817 5179 aa9□□□□□ -0.97
HCLS1-210ENST00000491824 Q6ZVQ6 151 aa8.99□□□□□ -0.97
HCLS1-210ENST00000491824 IGKV4-1P06312 121 aa8.97□□□□□ -0.97
HCLS1-210ENST00000491824 MUC17Q685J3 4493 aa8.96□□□□□ -0.97
HCLS1-210ENST00000491824 SIGMAR1Q99720 223 aa8.96□□□□□ -0.98
HCLS1-210ENST00000491824 PCOTHQ58A44 107 aa8.95□□□□□ -0.98
HCLS1-210ENST00000491824 RPL37P61927 97 aaKnown RBP8.94□□□□□ -0.98
HCLS1-210ENST00000491824 A8MWP4 228 aa8.93□□□□□ -0.98
HCLS1-210ENST00000491824 KRTAP9-2Q9BYQ4 174 aa8.93□□□□□ -0.98
HCLS1-210ENST00000491824 BPY2O14599 106 aa8.92□□□□□ -0.98
HCLS1-210ENST00000491824 NDUFB1O75438 58 aa8.92□□□□□ -0.98
HCLS1-210ENST00000491824 A0A1B0GVX0 72 aa8.9□□□□□ -0.98
HCLS1-210ENST00000491824 K7ERU9 68 aa8.9□□□□□ -0.98
HCLS1-210ENST00000491824 CXCL6P80162 114 aa8.9□□□□□ -0.98
HCLS1-210ENST00000491824 C8orf87E5RJ46 101 aa8.89□□□□□ -0.99
HCLS1-210ENST00000491824 DSCR10P59022 87 aa8.89□□□□□ -0.99
HCLS1-210ENST00000491824 DEFB116Q30KQ4 102 aa8.89□□□□□ -0.99
HCLS1-210ENST00000491824 ATP5EP2Q5VTU8 51 aa8.88□□□□□ -0.99
HCLS1-210ENST00000491824 ATP11AUNQ6ZP68 121 aa8.88□□□□□ -0.99
HCLS1-210ENST00000491824 PRR15Q8IV56 129 aa8.88□□□□□ -0.99
HCLS1-210ENST00000491824 IGKV3D-7A0A0C4DH55 119 aa8.86□□□□□ -0.99
HCLS1-210ENST00000491824 Q75L30 129 aa8.86□□□□□ -0.99
HCLS1-210ENST00000491824 LINC00643Q86TS7 51 aa8.86□□□□□ -0.99
HCLS1-210ENST00000491824 LINC00313P59037 77 aa8.85□□□□□ -0.99
HCLS1-210ENST00000491824 KRTAP4-1Q9BYQ7 146 aa8.83□□□□□ -1
HCLS1-210ENST00000491824 IGHV6-1A0A0B4J1U7 121 aa8.81□□□□□ -1
HCLS1-210ENST00000491824 K7EQZ3 153 aa8.79□□□□□ -1
HCLS1-210ENST00000491824 C8orf17Q9NRJ1 99 aa8.79□□□□□ -1
HCLS1-210ENST00000491824 KRTAP16-1A8MUX0 517 aa8.78□□□□□ -1
HCLS1-210ENST00000491824 C20orf166-AS1Q96NR2 134 aa8.78□□□□□ -1
HCLS1-210ENST00000491824 KRTAP9-6A0A140TA67 174 aa8.77□□□□□ -1.01
HCLS1-210ENST00000491824 NOTCH2NLQ7Z3S9 236 aa8.76□□□□□ -1.01
HCLS1-210ENST00000491824 A8MUU9 505 aa8.75□□□□□ -1.01
HCLS1-210ENST00000491824 MMP24-AS1A0A0U1RRL7 71 aa8.74□□□□□ -1.01
HCLS1-210ENST00000491824 FAT4Q6V0I7 4981 aa8.74□□□□□ -1.01
HCLS1-210ENST00000491824 Q8N9P0 234 aaPredicted RBP8.73□□□□□ -1.01
HCLS1-210ENST00000491824 TMEM254Q8TBM7 123 aa8.73□□□□□ -1.01
HCLS1-210ENST00000491824 LCE2AQ5TA79 106 aaPredicted RBP8.72□□□□□ -1.01
HCLS1-210ENST00000491824 COX6B2Q6YFQ2 88 aa8.72□□□□□ -1.01
HCLS1-210ENST00000491824 hDV103S1A0JD37 113 aa8.7□□□□□ -1.02
HCLS1-210ENST00000491824 Q8N9L7 120 aa8.7□□□□□ -1.02
HCLS1-210ENST00000491824 MRPL34Q9BQ48 92 aaKnown RBP8.69□□□□□ -1.02
HCLS1-210ENST00000491824 IMUPQ9GZP8 106 aa8.69□□□□□ -1.02
HCLS1-210ENST00000491824 HCG22E2RYF7 251 aa8.68□□□□□ -1.02
HCLS1-210ENST00000491824 CASC2Q6XLA1 102 aa8.67□□□□□ -1.02
HCLS1-210ENST00000491824 HIST1H4AP62805 103 aaKnown RBP8.62□□□□□ -1.03
HCLS1-210ENST00000491824 WFDC13Q8IUB5 93 aa8.6□□□□□ -1.03
HCLS1-210ENST00000491824 LCE2CQ5TA81 110 aa8.57□□□□□ -1.04
HCLS1-210ENST00000491824 TP53AIP1Q9HCN2 124 aa8.57□□□□□ -1.04
HCLS1-210ENST00000491824 M0R2T5 61 aa8.56□□□□□ -1.04
HCLS1-210ENST00000491824 MT-ATP8P03928 68 aa8.56□□□□□ -1.04
HCLS1-210ENST00000491824 KRTAP19-2Q3LHN2 52 aa8.56□□□□□ -1.04
HCLS1-210ENST00000491824 ZCCHC13Q8WW36 166 aaKnown RBP8.55□□□□□ -1.04
HCLS1-210ENST00000491824 MT1HP80294 61 aa8.53□□□□□ -1.04
HCLS1-210ENST00000491824 A0A087WVE0 104 aa8.52□□□□□ -1.05
HCLS1-210ENST00000491824 FAM236DA0A1B0GTK5 79 aa8.5□□□□□ -1.05
HCLS1-210ENST00000491824 NDUFS5O43920 106 aa8.5□□□□□ -1.05
HCLS1-210ENST00000491824 FAM236CP0DP71 79 aa8.5□□□□□ -1.05
HCLS1-210ENST00000491824 RBM12B-AS1Q9P1G2 102 aa8.5□□□□□ -1.05
HCLS1-210ENST00000491824 UQCRQO14949 82 aa8.45□□□□□ -1.06
HCLS1-210ENST00000491824 Q5W150 140 aa8.43□□□□□ -1.06
HCLS1-210ENST00000491824 OCR1Q9BZK8 76 aa8.42□□□□□ -1.06
HCLS1-210ENST00000491824 SMIM20Q8N5G0 67 aa8.41□□□□□ -1.06
HCLS1-210ENST00000491824 SPINK7P58062 85 aa8.4□□□□□ -1.06
HCLS1-210ENST00000491824 SCGB1A1P11684 91 aa8.39□□□□□ -1.07
HCLS1-210ENST00000491824 TRAV22A0A0B4J277 110 aa8.37□□□□□ -1.07
HCLS1-210ENST00000491824 FAM236AA0A1B0GUQ0 79 aa8.36□□□□□ -1.07
HCLS1-210ENST00000491824 FAM236BA0A1B0GV22 79 aa8.36□□□□□ -1.07
HCLS1-210ENST00000491824 ATOX1O00244 68 aa8.36□□□□□ -1.07
HCLS1-210ENST00000491824 HRES1P13985 223 aa8.36□□□□□ -1.07
HCLS1-210ENST00000491824 C5orf47Q569G3 176 aa8.36□□□□□ -1.07
HCLS1-210ENST00000491824 FSIP2Q5CZC0 6907 aa8.36□□□□□ -1.07
HCLS1-210ENST00000491824 KRTAP10-6P60371 365 aaPredicted RBP8.35□□□□□ -1.07
HCLS1-210ENST00000491824 CRCT1Q9UGL9 99 aa8.35□□□□□ -1.07
HCLS1-210ENST00000491824 C7orf65Q6ZTY9 151 aa8.33□□□□□ -1.08
HCLS1-210ENST00000491824 H3BPC8 53 aa8.32□□□□□ -1.08
HCLS1-210ENST00000491824 IGKV2-30P06310 120 aa8.32□□□□□ -1.08
HCLS1-210ENST00000491824 MPLKIPQ8TAP9 179 aa8.32□□□□□ -1.08
HCLS1-210ENST00000491824 FLGP20930 4061 aaPredicted RBP8.32□□□□□ -1.08
HCLS1-210ENST00000491824 TRAV7A0A075B6U4 112 aa8.31□□□□□ -1.08
HCLS1-210ENST00000491824 LOC101927531A0A1B0GV80 90 aa8.31□□□□□ -1.08
HCLS1-210ENST00000491824 LORP23490 312 aaPredicted RBP8.31□□□□□ -1.08
HCLS1-210ENST00000491824 LCE2DQ5TA82 110 aaPredicted RBP8.31□□□□□ -1.08
HCLS1-210ENST00000491824 H0Y9P7 68 aa8.28□□□□□ -1.08
HCLS1-210ENST00000491824 MP68P56378 58 aa8.28□□□□□ -1.08
HCLS1-210ENST00000491824 IGKV2D-30A0A075B6S6 120 aa8.25□□□□□ -1.09
HCLS1-210ENST00000491824 CYP4F30PQ9H0H9 118 aa8.25□□□□□ -1.09
HCLS1-210ENST00000491824 SERP2Q8N6R1 65 aa8.23□□□□□ -1.09
HCLS1-210ENST00000491824 C1orf64Q8NEQ6 169 aa8.21□□□□□ -1.1
HCLS1-210ENST00000491824 LINC00208Q96KT6 92 aa8.19□□□□□ -1.1
HCLS1-210ENST00000491824 COX7CP15954 63 aa8.11□□□□□ -1.11
HCLS1-210ENST00000491824 H1FX-AS1Q4G0G2 97 aa8.11□□□□□ -1.11
HCLS1-210ENST00000491824 KLKP1Q107X0 134 aa8.07□□□□□ -1.12
HCLS1-210ENST00000491824 C4orf26Q17RF5 130 aa8.07□□□□□ -1.12
HCLS1-210ENST00000491824 ANAPC13Q9BS18 74 aa8.05□□□□□ -1.12
HCLS1-210ENST00000491824 KRTAP9-8Q9BYQ0 159 aa8.05□□□□□ -1.12
HCLS1-210ENST00000491824 A8MUN3 132 aa8.03□□□□□ -1.12
HCLS1-210ENST00000491824 C20orf197Q8N268 126 aa8.03□□□□□ -1.12
HCLS1-210ENST00000491824 KRTAP3-1Q9BYR8 98 aa8.02□□□□□ -1.13
HCLS1-210ENST00000491824 KRTAP10-10P60014 251 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms