RNA–Protein interactions for RNA: ENST00000491629.5

USF1-206, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 933 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-206ENST00000491629 OBSCN-AS1Q96MR7 158 aa7.06□□□□□ -1.28
USF1-206ENST00000491629 V9GYY9 64 aa7.06□□□□□ -1.28
USF1-206ENST00000491629 CYSTM1Q9H1C7 97 aa7.05□□□□□ -1.28
USF1-206ENST00000491629 USH2AO75445 5202 aa7.04□□□□□ -1.28
USF1-206ENST00000491629 IGLV6-57P01721 117 aa7.02□□□□□ -1.29
USF1-206ENST00000491629 ADAMTSL4-AS1Q5T5F5 129 aa7.02□□□□□ -1.29
USF1-206ENST00000491629 DNAL4O96015 105 aa7.01□□□□□ -1.29
USF1-206ENST00000491629 NDUFC1O43677 76 aa7□□□□□ -1.29
USF1-206ENST00000491629 C1orf195Q5TG92 126 aa7□□□□□ -1.29
USF1-206ENST00000491629 SPRR1BP22528 89 aa6.99□□□□□ -1.29
USF1-206ENST00000491629 LIMD2Q9BT23 127 aa6.99□□□□□ -1.29
USF1-206ENST00000491629 TRAV7A0A075B6U4 112 aa6.98□□□□□ -1.29
USF1-206ENST00000491629 KLKP1Q107X0 134 aa6.98□□□□□ -1.29
USF1-206ENST00000491629 COX6B2Q6YFQ2 88 aa6.98□□□□□ -1.29
USF1-206ENST00000491629 LINC00308Q8TCZ7 52 aa6.98□□□□□ -1.29
USF1-206ENST00000491629 LAMTOR3Q9UHA4 124 aa6.98□□□□□ -1.29
USF1-206ENST00000491629 TRAV23DV6A0A075B6W5 121 aa6.97□□□□□ -1.29
USF1-206ENST00000491629 H0YGX0 51 aa6.97□□□□□ -1.29
USF1-206ENST00000491629 RPL37P61927 97 aaKnown RBP6.97□□□□□ -1.29
USF1-206ENST00000491629 SOSTDC1Q6X4U4 206 aa6.97□□□□□ -1.29
USF1-206ENST00000491629 TRAV13-2A0A0B4J235 113 aa6.96□□□□□ -1.3
USF1-206ENST00000491629 ZNF73O43830 326 aaPredicted RBP6.96□□□□□ -1.3
USF1-206ENST00000491629 GHRHP01286 108 aa6.96□□□□□ -1.3
USF1-206ENST00000491629 H7BZZ5 65 aa6.95□□□□□ -1.3
USF1-206ENST00000491629 LINC00846Q9NV44 126 aa6.95□□□□□ -1.3
USF1-206ENST00000491629 IGKV3D-7A0A0C4DH55 119 aa6.94□□□□□ -1.3
USF1-206ENST00000491629 FCGBPQ9Y6R7 5405 aaPredicted RBP6.94□□□□□ -1.3
USF1-206ENST00000491629 CCKP06307 115 aa6.93□□□□□ -1.3
USF1-206ENST00000491629 KRTAP9-8Q9BYQ0 159 aa6.92□□□□□ -1.3
USF1-206ENST00000491629 JMJD7-PLA2G4BH0Y9G9 81 aa6.91□□□□□ -1.3
USF1-206ENST00000491629 CD164Q04900 197 aa6.91□□□□□ -1.3
USF1-206ENST00000491629 A0A0G2JQZ4 141 aa6.9□□□□□ -1.3
USF1-206ENST00000491629 C20orf197Q8N268 126 aa6.9□□□□□ -1.3
USF1-206ENST00000491629 FAM218AQ96MZ4 157 aa6.9□□□□□ -1.3
USF1-206ENST00000491629 A0A087WVE0 104 aa6.89□□□□□ -1.31
USF1-206ENST00000491629 TRBV7-6A0A0J9YX20 115 aa6.87□□□□□ -1.31
USF1-206ENST00000491629 SMIM29Q86T20 159 aa6.87□□□□□ -1.31
USF1-206ENST00000491629 C14orf132Q9NPU4 83 aa6.87□□□□□ -1.31
USF1-206ENST00000491629 DHRS4-AS1Q9P1J3 65 aa6.86□□□□□ -1.31
USF1-206ENST00000491629 PRR15Q8IV56 129 aa6.85□□□□□ -1.31
USF1-206ENST00000491629 UBL5Q9BZL1 73 aa6.84□□□□□ -1.31
USF1-206ENST00000491629 ORMDL1Q9P0S3 153 aa6.84□□□□□ -1.31
USF1-206ENST00000491629 ELOF1P60002 83 aaKnown RBP6.83□□□□□ -1.32
USF1-206ENST00000491629 DEFB105AQ8NG35 78 aa6.83□□□□□ -1.32
USF1-206ENST00000491629 BRK1Q8WUW1 75 aa6.83□□□□□ -1.32
USF1-206ENST00000491629 RBM3P98179 157 aaKnown RBP6.82□□□□□ -1.32
USF1-206ENST00000491629 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
USF1-206ENST00000491629 H3BQ85 93 aa6.81□□□□□ -1.32
USF1-206ENST00000491629 CXCL6P80162 114 aa6.81□□□□□ -1.32
USF1-206ENST00000491629 KRTAP19-1Q8IUB9 90 aa6.81□□□□□ -1.32
USF1-206ENST00000491629 F8WEM9 126 aa6.8□□□□□ -1.32
USF1-206ENST00000491629 TMEM256-PLSCR3K7ERE1 68 aa6.8□□□□□ -1.32
USF1-206ENST00000491629 LCE2BO14633 110 aa6.8□□□□□ -1.32
USF1-206ENST00000491629 COX7BP24311 80 aa6.8□□□□□ -1.32
USF1-206ENST00000491629 SMIM11BQ8TCY0 68 aa6.8□□□□□ -1.32
USF1-206ENST00000491629 LOC110117498A0A087WWA1 95 aa6.79□□□□□ -1.32
USF1-206ENST00000491629 PDE6GP18545 87 aa6.79□□□□□ -1.32
USF1-206ENST00000491629 C6orf99Q4VX62 202 aa6.79□□□□□ -1.32
USF1-206ENST00000491629 IGLV5-48A0A075B6I7 105 aa6.77□□□□□ -1.33
USF1-206ENST00000491629 MT2AP02795 61 aa6.77□□□□□ -1.33
USF1-206ENST00000491629 TRBV7-4A0A0J9YYF1 115 aa6.76□□□□□ -1.33
USF1-206ENST00000491629 Q75L30 129 aa6.74□□□□□ -1.33
USF1-206ENST00000491629 MT1FP04733 61 aa6.73□□□□□ -1.33
USF1-206ENST00000491629 Q1T7F1 81 aa6.73□□□□□ -1.33
USF1-206ENST00000491629 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
USF1-206ENST00000491629 MACF1Q9UPN3 7388 aaKnown RBP6.71□□□□□ -1.33
USF1-206ENST00000491629 ATP11AUNQ6ZP68 121 aa6.71□□□□□ -1.34
USF1-206ENST00000491629 Q6ZQT0 140 aa6.71□□□□□ -1.34
USF1-206ENST00000491629 SYNE2Q8WXH0 6885 aaKnown RBP6.7□□□□□ -1.34
USF1-206ENST00000491629 SNURFQ9Y675 71 aa6.7□□□□□ -1.34
USF1-206ENST00000491629 TMEM254Q8TBM7 123 aa6.69□□□□□ -1.34
USF1-206ENST00000491629 NREPQ16612 68 aa6.68□□□□□ -1.34
USF1-206ENST00000491629 Q6ZVQ6 151 aa6.68□□□□□ -1.34
USF1-206ENST00000491629 hDV103S1A0JD37 113 aa6.65□□□□□ -1.34
USF1-206ENST00000491629 IGFL1Q6UW32 110 aa6.63□□□□□ -1.35
USF1-206ENST00000491629 MPLKIPQ8TAP9 179 aa6.62□□□□□ -1.35
USF1-206ENST00000491629 Q96NJ1 140 aa6.62□□□□□ -1.35
USF1-206ENST00000491629 C20orf166-AS1Q96NR2 134 aa6.62□□□□□ -1.35
USF1-206ENST00000491629 OCR1Q9BZK8 76 aa6.62□□□□□ -1.35
USF1-206ENST00000491629 BPY2O14599 106 aa6.61□□□□□ -1.35
USF1-206ENST00000491629 LINC00575Q6W349 94 aa6.61□□□□□ -1.35
USF1-206ENST00000491629 A8MUU9 505 aa6.6□□□□□ -1.35
USF1-206ENST00000491629 KRTAP16-1A8MUX0 517 aa6.6□□□□□ -1.35
USF1-206ENST00000491629 KRTAP10-10P60014 251 aa6.6□□□□□ -1.35
USF1-206ENST00000491629 CYP4F30PQ9H0H9 118 aa6.6□□□□□ -1.35
USF1-206ENST00000491629 NDUFS5O43920 106 aa6.58□□□□□ -1.36
USF1-206ENST00000491629 KRTAP19-6Q3LI70 58 aa6.58□□□□□ -1.36
USF1-206ENST00000491629 KTN1-AS1Q86SY8 53 aa6.57□□□□□ -1.36
USF1-206ENST00000491629 A0A1B0GW54 56 aa6.56□□□□□ -1.36
USF1-206ENST00000491629 Q6ZQY7 126 aa6.55□□□□□ -1.36
USF1-206ENST00000491629 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP6.54□□□□□ -1.36
USF1-206ENST00000491629 ZCCHC13Q8WW36 166 aaKnown RBP6.54□□□□□ -1.36
USF1-206ENST00000491629 IGKV4-1P06312 121 aa6.53□□□□□ -1.36
USF1-206ENST00000491629 HRES1P13985 223 aa6.52□□□□□ -1.37
USF1-206ENST00000491629 TRAV22A0A0B4J277 110 aa6.51□□□□□ -1.37
USF1-206ENST00000491629 KRTAP6-3Q3LI67 103 aa6.5□□□□□ -1.37
USF1-206ENST00000491629 C1orf64Q8NEQ6 169 aa6.5□□□□□ -1.37
USF1-206ENST00000491629 RBM12B-AS1Q9P1G2 102 aa6.5□□□□□ -1.37
USF1-206ENST00000491629 NDUFB1O75438 58 aa6.49□□□□□ -1.37
USF1-206ENST00000491629 DSCR10P59022 87 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms