RNA–Protein interactions for RNA: ENST00000490638.5

ARHGEF39-205, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 1 (best)

Gene ARHGEF39, Length 4,498 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-205ENST00000490638 KRTAP4-16G5E9R7 235 aaPredicted RBP8.58□□□□□ -1.04
ARHGEF39-205ENST00000490638 Q5XG85 94 aa8.58□□□□□ -1.04
ARHGEF39-205ENST00000490638 A0A087X002 238 aa8.56□□□□□ -1.04
ARHGEF39-205ENST00000490638 TRRAPQ9Y4A5 3859 aa8.55□□□□□ -1.04
ARHGEF39-205ENST00000490638 OXTP01178 125 aa8.54□□□□□ -1.04
ARHGEF39-205ENST00000490638 COA5Q86WW8 74 aa8.54□□□□□ -1.04
ARHGEF39-205ENST00000490638 KRTAP11-1Q8IUC1 163 aa8.54□□□□□ -1.04
ARHGEF39-205ENST00000490638 LINC00472Q9H8W2 130 aa8.53□□□□□ -1.04
ARHGEF39-205ENST00000490638 M0R2T5 61 aa8.52□□□□□ -1.05
ARHGEF39-205ENST00000490638 LINC00483Q53H64 154 aa8.52□□□□□ -1.05
ARHGEF39-205ENST00000490638 SEC61BP60468 96 aaKnown RBP8.5□□□□□ -1.05
ARHGEF39-205ENST00000490638 MMP24-AS1A0A0U1RRL7 71 aa8.5□□□□□ -1.05
ARHGEF39-205ENST00000490638 AKAP9Q99996 3911 aa8.5□□□□□ -1.05
ARHGEF39-205ENST00000490638 A8MUN3 132 aa8.49□□□□□ -1.05
ARHGEF39-205ENST00000490638 KRTAP7-1Q8IUC3 87 aa8.48□□□□□ -1.05
ARHGEF39-205ENST00000490638 ZCCHC13Q8WW36 166 aaKnown RBP8.48□□□□□ -1.05
ARHGEF39-205ENST00000490638 FP248Q71RG6 208 aaPredicted RBP8.46□□□□□ -1.06
ARHGEF39-205ENST00000490638 OCR1Q9BZK8 76 aa8.46□□□□□ -1.06
ARHGEF39-205ENST00000490638 SPINK7P58062 85 aa8.42□□□□□ -1.06
ARHGEF39-205ENST00000490638 LINC01554Q52M75 96 aa8.39□□□□□ -1.07
ARHGEF39-205ENST00000490638 Q8N9P0 234 aaPredicted RBP8.39□□□□□ -1.07
ARHGEF39-205ENST00000490638 HRES1P13985 223 aa8.38□□□□□ -1.07
ARHGEF39-205ENST00000490638 SPANXA2-OT1Q8N9U9 137 aa8.35□□□□□ -1.07
ARHGEF39-205ENST00000490638 UQCR11O14957 56 aa8.35□□□□□ -1.07
ARHGEF39-205ENST00000490638 Q5W150 140 aa8.33□□□□□ -1.08
ARHGEF39-205ENST00000490638 KRTAP13-2Q52LG2 175 aa8.32□□□□□ -1.08
ARHGEF39-205ENST00000490638 KRTAP13-1Q8IUC0 172 aa8.32□□□□□ -1.08
ARHGEF39-205ENST00000490638 CYP4F30PQ9H0H9 118 aa8.32□□□□□ -1.08
ARHGEF39-205ENST00000490638 CSAG1Q6PB30 78 aa8.29□□□□□ -1.08
ARHGEF39-205ENST00000490638 Q1T7F1 81 aa8.28□□□□□ -1.08
ARHGEF39-205ENST00000490638 ANK3Q12955 4377 aaKnown RBP8.27□□□□□ -1.08
ARHGEF39-205ENST00000490638 A0A0D9SG42 100 aa8.23□□□□□ -1.09
ARHGEF39-205ENST00000490638 RPS29P62273 56 aaKnown RBP8.23□□□□□ -1.09
ARHGEF39-205ENST00000490638 KTN1-AS1Q86SY8 53 aa8.22□□□□□ -1.09
ARHGEF39-205ENST00000490638 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.1
ARHGEF39-205ENST00000490638 NOTCH2NLQ7Z3S9 236 aa8.21□□□□□ -1.1
ARHGEF39-205ENST00000490638 MIR22HGQ0VDD5 57 aa8.2□□□□□ -1.1
ARHGEF39-205ENST00000490638 FBN3Q75N90 2809 aa8.2□□□□□ -1.1
ARHGEF39-205ENST00000490638 ASB16-AS1Q495Z4 193 aa8.2□□□□□ -1.1
ARHGEF39-205ENST00000490638 S4R3F8 94 aa8.18□□□□□ -1.1
ARHGEF39-205ENST00000490638 CSMD3Q7Z407 3707 aa8.13□□□□□ -1.11
ARHGEF39-205ENST00000490638 KRTAP29-1A8MX34 341 aaPredicted RBP8.13□□□□□ -1.11
ARHGEF39-205ENST00000490638 COL7A1Q02388 2944 aa8.1□□□□□ -1.11
ARHGEF39-205ENST00000490638 CAMK2N1Q7Z7J9 78 aa8.09□□□□□ -1.11
ARHGEF39-205ENST00000490638 CDC42SE1Q9NRR8 79 aa8.09□□□□□ -1.11
ARHGEF39-205ENST00000490638 A0A1B0GU33 70 aa8.08□□□□□ -1.12
ARHGEF39-205ENST00000490638 Q5VV11 94 aa8.08□□□□□ -1.12
ARHGEF39-205ENST00000490638 KRTAP1-4P0C5Y4 121 aa8.07□□□□□ -1.12
ARHGEF39-205ENST00000490638 R4GN34 69 aa8.05□□□□□ -1.12
ARHGEF39-205ENST00000490638 LCA10Q71F78 164 aa8.05□□□□□ -1.12
ARHGEF39-205ENST00000490638 Q75L30 129 aa8.03□□□□□ -1.12
ARHGEF39-205ENST00000490638 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
ARHGEF39-205ENST00000490638 RPL37P61927 97 aaKnown RBP8□□□□□ -1.13
ARHGEF39-205ENST00000490638 A0A1B0GVY2 172 aa7.97□□□□□ -1.13
ARHGEF39-205ENST00000490638 DMAC1Q96GE9 116 aa7.96□□□□□ -1.13
ARHGEF39-205ENST00000490638 LINC01558Q9Y6Z2 57 aa7.94□□□□□ -1.14
ARHGEF39-205ENST00000490638 H1FX-AS1Q4G0G2 97 aa7.91□□□□□ -1.14
ARHGEF39-205ENST00000490638 MEGF8Q7Z7M0 2845 aa7.91□□□□□ -1.14
ARHGEF39-205ENST00000490638 M0QZ58 72 aa7.88□□□□□ -1.15
ARHGEF39-205ENST00000490638 A8MUU9 505 aa7.87□□□□□ -1.15
ARHGEF39-205ENST00000490638 PRAC1Q96KF2 57 aa7.87□□□□□ -1.15
ARHGEF39-205ENST00000490638 A8MU10 97 aa7.86□□□□□ -1.15
ARHGEF39-205ENST00000490638 C20orf166-AS1Q96NR2 134 aa7.85□□□□□ -1.15
ARHGEF39-205ENST00000490638 XP32Q5T750 250 aa7.83□□□□□ -1.16
ARHGEF39-205ENST00000490638 ADM2Q7Z4H4 148 aa7.83□□□□□ -1.16
ARHGEF39-205ENST00000490638 TPRXLQ17RH7 258 aa7.78□□□□□ -1.16
ARHGEF39-205ENST00000490638 KRTAP10-8P60410 259 aa7.77□□□□□ -1.17
ARHGEF39-205ENST00000490638 ANK2Q01484 3957 aa7.75□□□□□ -1.17
ARHGEF39-205ENST00000490638 A6NN06 94 aa7.71□□□□□ -1.18
ARHGEF39-205ENST00000490638 PLAC4Q8WY50 150 aa7.71□□□□□ -1.18
ARHGEF39-205ENST00000490638 KRTAP13-3Q3SY46 172 aa7.67□□□□□ -1.18
ARHGEF39-205ENST00000490638 H3BS24 57 aa7.67□□□□□ -1.18
ARHGEF39-205ENST00000490638 SPATA8Q6RVD6 105 aa7.66□□□□□ -1.18
ARHGEF39-205ENST00000490638 DNAH10Q8IVF4 4471 aa7.6□□□□□ -1.19
ARHGEF39-205ENST00000490638 LYSTQ99698 3801 aa7.59□□□□□ -1.2
ARHGEF39-205ENST00000490638 KRTAP16-1A8MUX0 517 aa7.55□□□□□ -1.2
ARHGEF39-205ENST00000490638 HUWE1Q7Z6Z7 4374 aaKnown RBP7.53□□□□□ -1.2
ARHGEF39-205ENST00000490638 DNHD1Q96M86 4753 aa7.49□□□□□ -1.21
ARHGEF39-205ENST00000490638 ROMO1P60602 79 aa7.42□□□□□ -1.22
ARHGEF39-205ENST00000490638 KRTAP10-10P60014 251 aa7.4□□□□□ -1.22
ARHGEF39-205ENST00000490638 LUZP6Q538Z0 58 aa7.38□□□□□ -1.23
ARHGEF39-205ENST00000490638 PLECQ15149 4684 aaKnown RBP7.37□□□□□ -1.23
ARHGEF39-205ENST00000490638 DNAH9Q9NYC9 4486 aa7.33□□□□□ -1.24
ARHGEF39-205ENST00000490638 KRTAP4-5Q9BYR2 181 aa7.33□□□□□ -1.24
ARHGEF39-205ENST00000490638 CMYA5Q8N3K9 4069 aa7.33□□□□□ -1.24
ARHGEF39-205ENST00000490638 MT1HL1P0DM35 61 aa7.32□□□□□ -1.24
ARHGEF39-205ENST00000490638 DNAH7Q8WXX0 4024 aa7.3□□□□□ -1.24
ARHGEF39-205ENST00000490638 PRKDCP78527 4128 aaKnown RBP7.25□□□□□ -1.25
ARHGEF39-205ENST00000490638 STARD9Q9P2P6 4700 aa7.25□□□□□ -1.25
ARHGEF39-205ENST00000490638 KRTAP25-1Q3LHN0 102 aa7.24□□□□□ -1.25
ARHGEF39-205ENST00000490638 KMT2AQ03164 3969 aa7.22□□□□□ -1.25
ARHGEF39-205ENST00000490638 KRTAP10-4P60372 401 aaPredicted RBP7.21□□□□□ -1.26
ARHGEF39-205ENST00000490638 TNP1P09430 55 aa7.19□□□□□ -1.26
ARHGEF39-205ENST00000490638 P0C880 135 aa7.17□□□□□ -1.26
ARHGEF39-205ENST00000490638 DNAH1Q9P2D7 4330 aa7.14□□□□□ -1.27
ARHGEF39-205ENST00000490638 DNAH11Q96DT5 4516 aa7.12□□□□□ -1.27
ARHGEF39-205ENST00000490638 FRAS1Q86XX4 4008 aa7.11□□□□□ -1.27
ARHGEF39-205ENST00000490638 DNAH3Q8TD57 4116 aa7.1□□□□□ -1.27
ARHGEF39-205ENST00000490638 PRO2289Q9P1D8 64 aa7.03□□□□□ -1.28
ARHGEF39-205ENST00000490638 DNAH5Q8TE73 4624 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 102.6 ms