RNA–Protein interactions for RNA: ENST00000490447.6

YIPF3-208, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-208ENST00000490447 A8MUU9 505 aa9.1□□□□□ -0.95
YIPF3-208ENST00000490447 RBM3P98179 157 aaKnown RBP9.09□□□□□ -0.95
YIPF3-208ENST00000490447 A0A087WSZ3 146 aa9.08□□□□□ -0.96
YIPF3-208ENST00000490447 DSCR8Q96T75 97 aa9.06□□□□□ -0.96
YIPF3-208ENST00000490447 PDE6GP18545 87 aa9.05□□□□□ -0.96
YIPF3-208ENST00000490447 C21orf62-AS1Q17RA5 79 aa9.05□□□□□ -0.96
YIPF3-208ENST00000490447 ETDBQ3ZM63 59 aa9.05□□□□□ -0.96
YIPF3-208ENST00000490447 KRTAP9-8Q9BYQ0 159 aa9.05□□□□□ -0.96
YIPF3-208ENST00000490447 USH2AO75445 5202 aa9.04□□□□□ -0.96
YIPF3-208ENST00000490447 DSCR10P59022 87 aa9.04□□□□□ -0.96
YIPF3-208ENST00000490447 SIGMAR1Q99720 223 aa9.04□□□□□ -0.96
YIPF3-208ENST00000490447 A0A1B0GV72 72 aa9.03□□□□□ -0.96
YIPF3-208ENST00000490447 TRBV7-4A0A0J9YYF1 115 aa9.02□□□□□ -0.97
YIPF3-208ENST00000490447 FAM236DA0A1B0GTK5 79 aa9.02□□□□□ -0.97
YIPF3-208ENST00000490447 FAM236CP0DP71 79 aa9.02□□□□□ -0.97
YIPF3-208ENST00000490447 LOC110117498A0A087WWA1 95 aa9.01□□□□□ -0.97
YIPF3-208ENST00000490447 KRTAP9-1A8MXZ3 250 aaPredicted RBP9.01□□□□□ -0.97
YIPF3-208ENST00000490447 C14orf132Q9NPU4 83 aa9.01□□□□□ -0.97
YIPF3-208ENST00000490447 SSPOA2VEC9 5147 aa9□□□□□ -0.97
YIPF3-208ENST00000490447 KRTAP9-7A8MTY7 169 aa9□□□□□ -0.97
YIPF3-208ENST00000490447 LINC00313P59037 77 aa8.98□□□□□ -0.97
YIPF3-208ENST00000490447 Q6ZQT0 140 aa8.97□□□□□ -0.97
YIPF3-208ENST00000490447 CCKP06307 115 aa8.96□□□□□ -0.98
YIPF3-208ENST00000490447 A0A1B0GW54 56 aa8.95□□□□□ -0.98
YIPF3-208ENST00000490447 RBM12B-AS1Q9P1G2 102 aa8.95□□□□□ -0.98
YIPF3-208ENST00000490447 IGKV4-1P06312 121 aa8.94□□□□□ -0.98
YIPF3-208ENST00000490447 A0A1W2PNM2 257 aa8.93□□□□□ -0.98
YIPF3-208ENST00000490447 VPS25Q9BRG1 176 aa8.92□□□□□ -0.98
YIPF3-208ENST00000490447 MT2AP02795 61 aa8.91□□□□□ -0.98
YIPF3-208ENST00000490447 KRTAP16-1A8MUX0 517 aa8.9□□□□□ -0.98
YIPF3-208ENST00000490447 J3QR89 54 aa8.89□□□□□ -0.99
YIPF3-208ENST00000490447 IGHV6-1A0A0B4J1U7 121 aa8.85□□□□□ -0.99
YIPF3-208ENST00000490447 ACYP1P07311 99 aa8.85□□□□□ -0.99
YIPF3-208ENST00000490447 HRES1P13985 223 aa8.85□□□□□ -0.99
YIPF3-208ENST00000490447 DEFB116Q30KQ4 102 aa8.85□□□□□ -0.99
YIPF3-208ENST00000490447 KRTAP10-10P60014 251 aa8.84□□□□□ -0.99
YIPF3-208ENST00000490447 MPLKIPQ8TAP9 179 aa8.84□□□□□ -0.99
YIPF3-208ENST00000490447 FAM240AA0A1B0GVK7 77 aa8.83□□□□□ -1
YIPF3-208ENST00000490447 MT1FP04733 61 aa8.83□□□□□ -1
YIPF3-208ENST00000490447 NOTCH2NLQ7Z3S9 236 aa8.83□□□□□ -1
YIPF3-208ENST00000490447 FCGBPQ9Y6R7 5405 aaPredicted RBP8.83□□□□□ -1
YIPF3-208ENST00000490447 K7ERU9 68 aa8.8□□□□□ -1
YIPF3-208ENST00000490447 LINC00472Q9H8W2 130 aa8.8□□□□□ -1
YIPF3-208ENST00000490447 LCE2BO14633 110 aa8.8□□□□□ -1
YIPF3-208ENST00000490447 KRTAP19-1Q8IUB9 90 aa8.8□□□□□ -1
YIPF3-208ENST00000490447 NREPQ16612 68 aa8.78□□□□□ -1
YIPF3-208ENST00000490447 KRTAP9-3Q9BYQ3 159 aa8.78□□□□□ -1
YIPF3-208ENST00000490447 UBL5Q9BZL1 73 aa8.78□□□□□ -1
YIPF3-208ENST00000490447 C8orf87E5RJ46 101 aa8.77□□□□□ -1.01
YIPF3-208ENST00000490447 LINC00846Q9NV44 126 aa8.77□□□□□ -1.01
YIPF3-208ENST00000490447 A0A1B0GVX0 72 aa8.74□□□□□ -1.01
YIPF3-208ENST00000490447 Q6ZVQ6 151 aa8.73□□□□□ -1.01
YIPF3-208ENST00000490447 J3KT08 172 aa8.7□□□□□ -1.02
YIPF3-208ENST00000490447 ZCCHC13Q8WW36 166 aaKnown RBP8.7□□□□□ -1.02
YIPF3-208ENST00000490447 SPINK7P58062 85 aa8.68□□□□□ -1.02
YIPF3-208ENST00000490447 MACF1Q9UPN3 7388 aaKnown RBP8.67□□□□□ -1.02
YIPF3-208ENST00000490447 BPY2O14599 106 aa8.66□□□□□ -1.02
YIPF3-208ENST00000490447 LINC00643Q86TS7 51 aa8.65□□□□□ -1.02
YIPF3-208ENST00000490447 ATP5EP2Q5VTU8 51 aa8.64□□□□□ -1.03
YIPF3-208ENST00000490447 NDUFB1O75438 58 aa8.63□□□□□ -1.03
YIPF3-208ENST00000490447 CXCL6P80162 114 aa8.63□□□□□ -1.03
YIPF3-208ENST00000490447 SYNE2Q8WXH0 6885 aaKnown RBP8.61□□□□□ -1.03
YIPF3-208ENST00000490447 A8MWP4 228 aa8.61□□□□□ -1.03
YIPF3-208ENST00000490447 WFDC13Q8IUB5 93 aa8.59□□□□□ -1.03
YIPF3-208ENST00000490447 Q8N9P0 234 aaPredicted RBP8.58□□□□□ -1.04
YIPF3-208ENST00000490447 KRTAP19-6Q3LI70 58 aa8.55□□□□□ -1.04
YIPF3-208ENST00000490447 IGKV3D-7A0A0C4DH55 119 aa8.54□□□□□ -1.04
YIPF3-208ENST00000490447 PRR15Q8IV56 129 aa8.54□□□□□ -1.04
YIPF3-208ENST00000490447 C8orf17Q9NRJ1 99 aa8.54□□□□□ -1.04
YIPF3-208ENST00000490447 K7EQZ3 153 aa8.53□□□□□ -1.04
YIPF3-208ENST00000490447 Q8N9L7 120 aa8.49□□□□□ -1.05
YIPF3-208ENST00000490447 HIST1H4AP62805 103 aaKnown RBP8.48□□□□□ -1.05
YIPF3-208ENST00000490447 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
YIPF3-208ENST00000490447 MT-ATP8P03928 68 aa8.45□□□□□ -1.06
YIPF3-208ENST00000490447 MMP24-AS1A0A0U1RRL7 71 aa8.42□□□□□ -1.06
YIPF3-208ENST00000490447 HCG22E2RYF7 251 aa8.42□□□□□ -1.06
YIPF3-208ENST00000490447 CASC2Q6XLA1 102 aa8.41□□□□□ -1.06
YIPF3-208ENST00000490447 hDV103S1A0JD37 113 aa8.4□□□□□ -1.06
YIPF3-208ENST00000490447 H1FX-AS1Q4G0G2 97 aa8.4□□□□□ -1.06
YIPF3-208ENST00000490447 TMEM254Q8TBM7 123 aa8.39□□□□□ -1.07
YIPF3-208ENST00000490447 MRPL34Q9BQ48 92 aaKnown RBP8.39□□□□□ -1.07
YIPF3-208ENST00000490447 A0A087WVE0 104 aa8.37□□□□□ -1.07
YIPF3-208ENST00000490447 NDUFS5O43920 106 aa8.37□□□□□ -1.07
YIPF3-208ENST00000490447 KRTAP6-3Q3LI67 103 aa8.32□□□□□ -1.08
YIPF3-208ENST00000490447 IGKV2D-30A0A075B6S6 120 aa8.3□□□□□ -1.08
YIPF3-208ENST00000490447 IGKV2-30P06310 120 aa8.3□□□□□ -1.08
YIPF3-208ENST00000490447 C7orf65Q6ZTY9 151 aa8.29□□□□□ -1.08
YIPF3-208ENST00000490447 SCGB1A1P11684 91 aa8.28□□□□□ -1.08
YIPF3-208ENST00000490447 TP53AIP1Q9HCN2 124 aa8.28□□□□□ -1.08
YIPF3-208ENST00000490447 FAM236AA0A1B0GUQ0 79 aa8.26□□□□□ -1.09
YIPF3-208ENST00000490447 FAM236BA0A1B0GV22 79 aa8.26□□□□□ -1.09
YIPF3-208ENST00000490447 SMIM20Q8N5G0 67 aa8.22□□□□□ -1.09
YIPF3-208ENST00000490447 ATOX1O00244 68 aa8.2□□□□□ -1.1
YIPF3-208ENST00000490447 UQCRQO14949 82 aa8.19□□□□□ -1.1
YIPF3-208ENST00000490447 Q5W150 140 aa8.19□□□□□ -1.1
YIPF3-208ENST00000490447 OCR1Q9BZK8 76 aa8.18□□□□□ -1.1
YIPF3-208ENST00000490447 C4orf26Q17RF5 130 aa8.17□□□□□ -1.1
YIPF3-208ENST00000490447 TRAV7A0A075B6U4 112 aa8.13□□□□□ -1.11
YIPF3-208ENST00000490447 C5orf47Q569G3 176 aa8.13□□□□□ -1.11
YIPF3-208ENST00000490447 TRAV22A0A0B4J277 110 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 212.5 ms