RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 DNAH11Q96DT5 4516 aa5.77□□□□□ -1.49
RAB3GAP1-205ENST00000489858 KRTAP29-1A8MX34 341 aaPredicted RBP5.77□□□□□ -1.49
RAB3GAP1-205ENST00000489858 NDUFB1O75438 58 aa5.77□□□□□ -1.49
RAB3GAP1-205ENST00000489858 MP68P56378 58 aa5.77□□□□□ -1.49
RAB3GAP1-205ENST00000489858 MOBPQ13875 183 aa5.76□□□□□ -1.49
RAB3GAP1-205ENST00000489858 ZCCHC13Q8WW36 166 aaKnown RBP5.76□□□□□ -1.49
RAB3GAP1-205ENST00000489858 IGLV7-43P04211 117 aa5.75□□□□□ -1.49
RAB3GAP1-205ENST00000489858 MMP24-AS1A0A0U1RRL7 71 aa5.73□□□□□ -1.49
RAB3GAP1-205ENST00000489858 H3BPC8 53 aa5.73□□□□□ -1.49
RAB3GAP1-205ENST00000489858 KRTAP21-3Q3LHN1 58 aa5.73□□□□□ -1.49
RAB3GAP1-205ENST00000489858 SMIM26A0A096LP01 95 aa5.72□□□□□ -1.49
RAB3GAP1-205ENST00000489858 H0Y9P7 68 aa5.72□□□□□ -1.49
RAB3GAP1-205ENST00000489858 CDK2AP2O75956 126 aa5.72□□□□□ -1.49
RAB3GAP1-205ENST00000489858 HRCT1Q6UXD1 115 aa5.72□□□□□ -1.49
RAB3GAP1-205ENST00000489858 Q96NJ1 140 aa5.72□□□□□ -1.49
RAB3GAP1-205ENST00000489858 DNAH5Q8TE73 4624 aa5.72□□□□□ -1.49
RAB3GAP1-205ENST00000489858 hDV103S1A0JD37 113 aa5.7□□□□□ -1.5
RAB3GAP1-205ENST00000489858 FBN3Q75N90 2809 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 TRAV22A0A0B4J277 110 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 A0A1B0GVX0 72 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 CD164Q04900 197 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 Q5XG85 94 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 CIRBP-AS1Q8TBR5 109 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 C8orf17Q9NRJ1 99 aa5.69□□□□□ -1.5
RAB3GAP1-205ENST00000489858 LINC00208Q96KT6 92 aa5.68□□□□□ -1.5
RAB3GAP1-205ENST00000489858 ANAPC11Q9NYG5 84 aa5.68□□□□□ -1.5
RAB3GAP1-205ENST00000489858 FRAS1Q86XX4 4008 aa5.68□□□□□ -1.5
RAB3GAP1-205ENST00000489858 SSBP3-AS1Q7Z2R9 100 aa5.67□□□□□ -1.5
RAB3GAP1-205ENST00000489858 CYP4F30PQ9H0H9 118 aa5.67□□□□□ -1.5
RAB3GAP1-205ENST00000489858 TP53AIP1Q9HCN2 124 aa5.67□□□□□ -1.5
RAB3GAP1-205ENST00000489858 SRRM2Q9UQ35 2752 aaKnown RBP5.67□□□□□ -1.5
RAB3GAP1-205ENST00000489858 IGHV6-1A0A0B4J1U7 121 aa5.66□□□□□ -1.5
RAB3GAP1-205ENST00000489858 ASB16-AS1Q495Z4 193 aa5.66□□□□□ -1.5
RAB3GAP1-205ENST00000489858 Q6ZSA8 131 aa5.66□□□□□ -1.5
RAB3GAP1-205ENST00000489858 KMT2AQ03164 3969 aa5.65□□□□□ -1.5
RAB3GAP1-205ENST00000489858 KRTAP10-1P60331 282 aa5.64□□□□□ -1.51
RAB3GAP1-205ENST00000489858 C4orf26Q17RF5 130 aa5.64□□□□□ -1.51
RAB3GAP1-205ENST00000489858 FAM229BQ4G0N7 80 aa5.64□□□□□ -1.51
RAB3GAP1-205ENST00000489858 FP248Q71RG6 208 aaPredicted RBP5.63□□□□□ -1.51
RAB3GAP1-205ENST00000489858 SPANXA2-OT1Q8N9U9 137 aa5.63□□□□□ -1.51
RAB3GAP1-205ENST00000489858 C1orf64Q8NEQ6 169 aa5.63□□□□□ -1.51
RAB3GAP1-205ENST00000489858 MRPL34Q9BQ48 92 aaKnown RBP5.63□□□□□ -1.51
RAB3GAP1-205ENST00000489858 PKD1P98161 4303 aa5.62□□□□□ -1.51
RAB3GAP1-205ENST00000489858 FAT2Q9NYQ8 4349 aa5.62□□□□□ -1.51
RAB3GAP1-205ENST00000489858 C8orf87E5RJ46 101 aa5.61□□□□□ -1.51
RAB3GAP1-205ENST00000489858 NDUFS5O43920 106 aa5.61□□□□□ -1.51
RAB3GAP1-205ENST00000489858 SPINK6Q6UWN8 80 aa5.6□□□□□ -1.51
RAB3GAP1-205ENST00000489858 PRR4Q16378 134 aa5.59□□□□□ -1.51
RAB3GAP1-205ENST00000489858 TGP01266 2768 aa5.59□□□□□ -1.52
RAB3GAP1-205ENST00000489858 A0A087X002 238 aa5.56□□□□□ -1.52
RAB3GAP1-205ENST00000489858 KRTAP13-2Q52LG2 175 aa5.56□□□□□ -1.52
RAB3GAP1-205ENST00000489858 LIMD2Q9BT23 127 aa5.56□□□□□ -1.52
RAB3GAP1-205ENST00000489858 LRP1BQ9NZR2 4599 aa5.55□□□□□ -1.52
RAB3GAP1-205ENST00000489858 MPLKIPQ8TAP9 179 aa5.55□□□□□ -1.52
RAB3GAP1-205ENST00000489858 SACSQ9NZJ4 4579 aa5.55□□□□□ -1.52
RAB3GAP1-205ENST00000489858 LOC101927531A0A1B0GV80 90 aa5.54□□□□□ -1.52
RAB3GAP1-205ENST00000489858 NOTCH2NLQ7Z3S9 236 aa5.54□□□□□ -1.52
RAB3GAP1-205ENST00000489858 HYDINQ4G0P3 5121 aa5.53□□□□□ -1.52
RAB3GAP1-205ENST00000489858 IGLV7-46A0A075B6I9 117 aa5.53□□□□□ -1.52
RAB3GAP1-205ENST00000489858 KRTAP1-4P0C5Y4 121 aa5.53□□□□□ -1.52
RAB3GAP1-205ENST00000489858 PCOTHQ58A44 107 aa5.53□□□□□ -1.52
RAB3GAP1-205ENST00000489858 LINC00336Q6ZUF6 198 aa5.53□□□□□ -1.52
RAB3GAP1-205ENST00000489858 Q1T7F1 81 aa5.52□□□□□ -1.53
RAB3GAP1-205ENST00000489858 LINC00313P59037 77 aa5.51□□□□□ -1.53
RAB3GAP1-205ENST00000489858 C1orf195Q5TG92 126 aa5.51□□□□□ -1.53
RAB3GAP1-205ENST00000489858 V9GYY9 64 aa5.51□□□□□ -1.53
RAB3GAP1-205ENST00000489858 DYNC1H1Q14204 4646 aaKnown RBP5.51□□□□□ -1.53
RAB3GAP1-205ENST00000489858 TYMSOSQ8TAI1 123 aa5.49□□□□□ -1.53
RAB3GAP1-205ENST00000489858 KRTAP13-3Q3SY46 172 aa5.48□□□□□ -1.53
RAB3GAP1-205ENST00000489858 COA5Q86WW8 74 aa5.48□□□□□ -1.53
RAB3GAP1-205ENST00000489858 SPINK1P00995 79 aa5.46□□□□□ -1.54
RAB3GAP1-205ENST00000489858 Q5W150 140 aa5.45□□□□□ -1.54
RAB3GAP1-205ENST00000489858 Q8N9P0 234 aaPredicted RBP5.45□□□□□ -1.54
RAB3GAP1-205ENST00000489858 PRO0628Q9UI54 55 aa5.45□□□□□ -1.54
RAB3GAP1-205ENST00000489858 RPS29P62273 56 aaKnown RBP5.43□□□□□ -1.54
RAB3GAP1-205ENST00000489858 SPAG11AQ6PDA7 123 aa5.43□□□□□ -1.54
RAB3GAP1-205ENST00000489858 LINC00304Q8N9R0 145 aa5.43□□□□□ -1.54
RAB3GAP1-205ENST00000489858 BRK1Q8WUW1 75 aa5.43□□□□□ -1.54
RAB3GAP1-205ENST00000489858 A0A1B0GVY2 172 aa5.42□□□□□ -1.54
RAB3GAP1-205ENST00000489858 KRTAP16-1A8MUX0 517 aa5.42□□□□□ -1.54
RAB3GAP1-205ENST00000489858 APOBP04114 4563 aaKnown RBP5.41□□□□□ -1.54
RAB3GAP1-205ENST00000489858 VPS13BQ7Z7G8 4022 aa5.4□□□□□ -1.54
RAB3GAP1-205ENST00000489858 PSPHP1O15172 72 aa5.4□□□□□ -1.54
RAB3GAP1-205ENST00000489858 IGKV2-30P06310 120 aa5.4□□□□□ -1.54
RAB3GAP1-205ENST00000489858 HRES1P13985 223 aa5.4□□□□□ -1.54
RAB3GAP1-205ENST00000489858 PRR26Q8N8Z3 221 aa5.4□□□□□ -1.54
RAB3GAP1-205ENST00000489858 PKHD1L1Q86WI1 4243 aa5.39□□□□□ -1.55
RAB3GAP1-205ENST00000489858 PRR15LQ9BU68 103 aa5.39□□□□□ -1.55
RAB3GAP1-205ENST00000489858 A8MUN3 132 aa5.38□□□□□ -1.55
RAB3GAP1-205ENST00000489858 RETNLBQ9BQ08 111 aa5.38□□□□□ -1.55
RAB3GAP1-205ENST00000489858 RYR2Q92736 4967 aa5.37□□□□□ -1.55
RAB3GAP1-205ENST00000489858 SMR3BP02814 79 aaPredicted RBP5.37□□□□□ -1.55
RAB3GAP1-205ENST00000489858 ACYP2P14621 99 aa5.36□□□□□ -1.55
RAB3GAP1-205ENST00000489858 Q5VV11 94 aa5.36□□□□□ -1.55
RAB3GAP1-205ENST00000489858 DMAC1Q96GE9 116 aa5.35□□□□□ -1.55
RAB3GAP1-205ENST00000489858 PKHD1P08F94 4074 aa5.34□□□□□ -1.55
RAB3GAP1-205ENST00000489858 Q75L30 129 aa5.34□□□□□ -1.55
RAB3GAP1-205ENST00000489858 LINC01558Q9Y6Z2 57 aa5.34□□□□□ -1.55
RAB3GAP1-205ENST00000489858 KRTAP10-4P60372 401 aaPredicted RBP5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms