RNA–Protein interactions for RNA: ENST00000489842.1

GTF3C5-210, Transcript of general transcription factor IIIC subunit 5, humanhuman

TSL 2

Gene GTF3C5, Length 696 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C5-210ENST00000489842 IGKV4-1P06312 121 aa4.58□□□□□ -1.68
GTF3C5-210ENST00000489842 MT2AP02795 61 aa4.57□□□□□ -1.68
GTF3C5-210ENST00000489842 HRES1P13985 223 aa4.56□□□□□ -1.68
GTF3C5-210ENST00000489842 LINC00313P59037 77 aa4.56□□□□□ -1.68
GTF3C5-210ENST00000489842 ANKRD29Q8N6D5 301 aa4.56□□□□□ -1.68
GTF3C5-210ENST00000489842 MT1FP04733 61 aa4.55□□□□□ -1.68
GTF3C5-210ENST00000489842 FCGBPQ9Y6R7 5405 aaPredicted RBP4.55□□□□□ -1.68
GTF3C5-210ENST00000489842 IGHV6-1A0A0B4J1U7 121 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 FAM236DA0A1B0GTK5 79 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 H3BT86 120 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 LCE2BO14633 110 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 DNAL4O96015 105 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 FAM236CP0DP71 79 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 C21orf62-AS1Q17RA5 79 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 NAA38Q9BRA0 125 aaKnown RBP4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 LINC00472Q9H8W2 130 aa4.54□□□□□ -1.68
GTF3C5-210ENST00000489842 TMEM256-PLSCR3K7ERE1 68 aa4.53□□□□□ -1.68
GTF3C5-210ENST00000489842 ORMDL1Q9P0S3 153 aa4.53□□□□□ -1.68
GTF3C5-210ENST00000489842 TRBV7-4A0A0J9YYF1 115 aa4.52□□□□□ -1.69
GTF3C5-210ENST00000489842 KRTAP9-7A8MTY7 169 aa4.52□□□□□ -1.69
GTF3C5-210ENST00000489842 CCKP06307 115 aa4.52□□□□□ -1.69
GTF3C5-210ENST00000489842 MPLKIPQ8TAP9 179 aa4.52□□□□□ -1.69
GTF3C5-210ENST00000489842 VPS25Q9BRG1 176 aa4.52□□□□□ -1.69
GTF3C5-210ENST00000489842 PRO0461Q9UI25 63 aa4.51□□□□□ -1.69
GTF3C5-210ENST00000489842 C9JAW5 83 aa4.5□□□□□ -1.69
GTF3C5-210ENST00000489842 BAALC-AS2P0C853 105 aa4.49□□□□□ -1.69
GTF3C5-210ENST00000489842 KRTAP19-1Q8IUB9 90 aa4.49□□□□□ -1.69
GTF3C5-210ENST00000489842 KRTAP9-3Q9BYQ3 159 aa4.49□□□□□ -1.69
GTF3C5-210ENST00000489842 JMJD7-PLA2G4BH0Y9G9 81 aa4.48□□□□□ -1.69
GTF3C5-210ENST00000489842 J3QR89 54 aa4.48□□□□□ -1.69
GTF3C5-210ENST00000489842 KRTAP10-10P60014 251 aa4.48□□□□□ -1.69
GTF3C5-210ENST00000489842 A0A1B0GVX0 72 aa4.47□□□□□ -1.69
GTF3C5-210ENST00000489842 PDE6GP18545 87 aa4.47□□□□□ -1.69
GTF3C5-210ENST00000489842 RBM12B-AS1Q9P1G2 102 aa4.46□□□□□ -1.7
GTF3C5-210ENST00000489842 SMCPP49901 116 aaPredicted RBP4.45□□□□□ -1.7
GTF3C5-210ENST00000489842 A0A1B0GW54 56 aa4.44□□□□□ -1.7
GTF3C5-210ENST00000489842 K7ERU9 68 aa4.44□□□□□ -1.7
GTF3C5-210ENST00000489842 ETDBQ3ZM63 59 aa4.44□□□□□ -1.7
GTF3C5-210ENST00000489842 ZCCHC13Q8WW36 166 aaKnown RBP4.44□□□□□ -1.7
GTF3C5-210ENST00000489842 SPINK7P58062 85 aa4.43□□□□□ -1.7
GTF3C5-210ENST00000489842 RBM3P98179 157 aaKnown RBP4.43□□□□□ -1.7
GTF3C5-210ENST00000489842 C8orf87E5RJ46 101 aa4.42□□□□□ -1.7
GTF3C5-210ENST00000489842 ACYP1P07311 99 aa4.42□□□□□ -1.7
GTF3C5-210ENST00000489842 FAM240AA0A1B0GVK7 77 aa4.41□□□□□ -1.7
GTF3C5-210ENST00000489842 Q6ZQT0 140 aa4.41□□□□□ -1.7
GTF3C5-210ENST00000489842 DSCR8Q96T75 97 aa4.41□□□□□ -1.7
GTF3C5-210ENST00000489842 LOC110117498A0A087WWA1 95 aa4.4□□□□□ -1.71
GTF3C5-210ENST00000489842 MTURNQ8N3F0 131 aa4.4□□□□□ -1.71
GTF3C5-210ENST00000489842 IGKV3D-7A0A0C4DH55 119 aa4.39□□□□□ -1.71
GTF3C5-210ENST00000489842 WFDC13Q8IUB5 93 aa4.39□□□□□ -1.71
GTF3C5-210ENST00000489842 C8orf17Q9NRJ1 99 aa4.39□□□□□ -1.71
GTF3C5-210ENST00000489842 Q8N9P0 234 aaPredicted RBP4.38□□□□□ -1.71
GTF3C5-210ENST00000489842 MACF1Q9UPN3 7388 aaKnown RBP4.36□□□□□ -1.71
GTF3C5-210ENST00000489842 C14orf132Q9NPU4 83 aa4.36□□□□□ -1.71
GTF3C5-210ENST00000489842 A8MWP4 228 aa4.35□□□□□ -1.71
GTF3C5-210ENST00000489842 J3KT08 172 aa4.35□□□□□ -1.71
GTF3C5-210ENST00000489842 NDUFB1O75438 58 aa4.34□□□□□ -1.71
GTF3C5-210ENST00000489842 MMP24-AS1A0A0U1RRL7 71 aa4.33□□□□□ -1.72
GTF3C5-210ENST00000489842 Q6ZVQ6 151 aa4.33□□□□□ -1.72
GTF3C5-210ENST00000489842 KRTAP19-6Q3LI70 58 aa4.32□□□□□ -1.72
GTF3C5-210ENST00000489842 PRR15Q8IV56 129 aa4.31□□□□□ -1.72
GTF3C5-210ENST00000489842 UBL5Q9BZL1 73 aa4.31□□□□□ -1.72
GTF3C5-210ENST00000489842 SYNE2Q8WXH0 6885 aaKnown RBP4.31□□□□□ -1.72
GTF3C5-210ENST00000489842 K7EQZ3 153 aa4.3□□□□□ -1.72
GTF3C5-210ENST00000489842 ATP5EP2Q5VTU8 51 aa4.3□□□□□ -1.72
GTF3C5-210ENST00000489842 LINC00643Q86TS7 51 aa4.3□□□□□ -1.72
GTF3C5-210ENST00000489842 NREPQ16612 68 aa4.29□□□□□ -1.72
GTF3C5-210ENST00000489842 Q5W150 140 aa4.29□□□□□ -1.72
GTF3C5-210ENST00000489842 MRPL34Q9BQ48 92 aaKnown RBP4.29□□□□□ -1.72
GTF3C5-210ENST00000489842 NDUFS5O43920 106 aa4.28□□□□□ -1.72
GTF3C5-210ENST00000489842 IMUPQ9GZP8 106 aa4.28□□□□□ -1.72
GTF3C5-210ENST00000489842 IGKV2D-30A0A075B6S6 120 aa4.27□□□□□ -1.73
GTF3C5-210ENST00000489842 IGKV2-30P06310 120 aa4.27□□□□□ -1.73
GTF3C5-210ENST00000489842 Q8N9L7 120 aa4.27□□□□□ -1.73
GTF3C5-210ENST00000489842 TMEM254Q8TBM7 123 aa4.27□□□□□ -1.73
GTF3C5-210ENST00000489842 LINC00846Q9NV44 126 aa4.27□□□□□ -1.73
GTF3C5-210ENST00000489842 hDV103S1A0JD37 113 aa4.26□□□□□ -1.73
GTF3C5-210ENST00000489842 CXCL6P80162 114 aa4.26□□□□□ -1.73
GTF3C5-210ENST00000489842 H1FX-AS1Q4G0G2 97 aa4.26□□□□□ -1.73
GTF3C5-210ENST00000489842 BPY2O14599 106 aa4.22□□□□□ -1.73
GTF3C5-210ENST00000489842 C4orf26Q17RF5 130 aa4.22□□□□□ -1.73
GTF3C5-210ENST00000489842 SCGB1A1P11684 91 aa4.21□□□□□ -1.74
GTF3C5-210ENST00000489842 HCG22E2RYF7 251 aa4.2□□□□□ -1.74
GTF3C5-210ENST00000489842 C7orf65Q6ZTY9 151 aa4.19□□□□□ -1.74
GTF3C5-210ENST00000489842 MT-ATP8P03928 68 aa4.18□□□□□ -1.74
GTF3C5-210ENST00000489842 C5orf47Q569G3 176 aa4.18□□□□□ -1.74
GTF3C5-210ENST00000489842 KRTAP3-1Q9BYR8 98 aa4.18□□□□□ -1.74
GTF3C5-210ENST00000489842 CASC2Q6XLA1 102 aa4.17□□□□□ -1.74
GTF3C5-210ENST00000489842 KRTAP6-3Q3LI67 103 aa4.16□□□□□ -1.74
GTF3C5-210ENST00000489842 MT1BP07438 61 aa4.15□□□□□ -1.75
GTF3C5-210ENST00000489842 MUC12Q9UKN1 5478 aa4.14□□□□□ -1.75
GTF3C5-210ENST00000489842 SMIM20Q8N5G0 67 aa4.13□□□□□ -1.75
GTF3C5-210ENST00000489842 FAM236AA0A1B0GUQ0 79 aa4.12□□□□□ -1.75
GTF3C5-210ENST00000489842 FAM236BA0A1B0GV22 79 aa4.12□□□□□ -1.75
GTF3C5-210ENST00000489842 HIST1H4AP62805 103 aaKnown RBP4.12□□□□□ -1.75
GTF3C5-210ENST00000489842 ATOX1O00244 68 aa4.1□□□□□ -1.75
GTF3C5-210ENST00000489842 LCA10Q71F78 164 aa4.1□□□□□ -1.75
GTF3C5-210ENST00000489842 C1orf64Q8NEQ6 169 aa4.09□□□□□ -1.75
GTF3C5-210ENST00000489842 S4R3F8 94 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 200.2 ms