RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 IGKV4-1P06312 121 aa9.26□□□□□ -0.93
MDC1-206ENST00000489540 LINC00472Q9H8W2 130 aa9.26□□□□□ -0.93
MDC1-206ENST00000489540 ACYP1P07311 99 aa9.25□□□□□ -0.93
MDC1-206ENST00000489540 PDE6GP18545 87 aa9.25□□□□□ -0.93
MDC1-206ENST00000489540 Q75L30 129 aa9.25□□□□□ -0.93
MDC1-206ENST00000489540 LOC110117498A0A087WWA1 95 aa9.23□□□□□ -0.93
MDC1-206ENST00000489540 ATP11AUNQ6ZP68 121 aa9.22□□□□□ -0.93
MDC1-206ENST00000489540 A0A1B0GW54 56 aa9.22□□□□□ -0.93
MDC1-206ENST00000489540 LCE2AQ5TA79 106 aaPredicted RBP9.22□□□□□ -0.93
MDC1-206ENST00000489540 DEFB116Q30KQ4 102 aa9.21□□□□□ -0.94
MDC1-206ENST00000489540 Q6ZQT0 140 aa9.21□□□□□ -0.94
MDC1-206ENST00000489540 LINC00313P59037 77 aa9.2□□□□□ -0.94
MDC1-206ENST00000489540 C20orf166-AS1Q96NR2 134 aa9.2□□□□□ -0.94
MDC1-206ENST00000489540 DSCR10P59022 87 aa9.19□□□□□ -0.94
MDC1-206ENST00000489540 A8MUU9 505 aa9.17□□□□□ -0.94
MDC1-206ENST00000489540 C14orf132Q9NPU4 83 aa9.17□□□□□ -0.94
MDC1-206ENST00000489540 J3KT08 172 aa9.16□□□□□ -0.94
MDC1-206ENST00000489540 IGHV6-1A0A0B4J1U7 121 aa9.13□□□□□ -0.95
MDC1-206ENST00000489540 MT-ATP8P03928 68 aa9.13□□□□□ -0.95
MDC1-206ENST00000489540 A0A1B0GVX0 72 aa9.11□□□□□ -0.95
MDC1-206ENST00000489540 C8orf87E5RJ46 101 aa9.11□□□□□ -0.95
MDC1-206ENST00000489540 KRTAP16-1A8MUX0 517 aa9.1□□□□□ -0.95
MDC1-206ENST00000489540 NOTCH2NLQ7Z3S9 236 aa9.1□□□□□ -0.95
MDC1-206ENST00000489540 KRTAP19-2Q3LHN2 52 aa9.09□□□□□ -0.95
MDC1-206ENST00000489540 LCE2CQ5TA81 110 aa9.09□□□□□ -0.95
MDC1-206ENST00000489540 NDUFB1O75438 58 aa9.08□□□□□ -0.96
MDC1-206ENST00000489540 LINC00643Q86TS7 51 aa9.07□□□□□ -0.96
MDC1-206ENST00000489540 NREPQ16612 68 aa9.06□□□□□ -0.96
MDC1-206ENST00000489540 IMUPQ9GZP8 106 aa9.06□□□□□ -0.96
MDC1-206ENST00000489540 A8MWP4 228 aa9.03□□□□□ -0.96
MDC1-206ENST00000489540 COX6B2Q6YFQ2 88 aa9□□□□□ -0.97
MDC1-206ENST00000489540 IGKV3D-7A0A0C4DH55 119 aa8.98□□□□□ -0.97
MDC1-206ENST00000489540 MT1HP80294 61 aa8.97□□□□□ -0.97
MDC1-206ENST00000489540 C8orf17Q9NRJ1 99 aa8.97□□□□□ -0.97
MDC1-206ENST00000489540 PRR15Q8IV56 129 aa8.96□□□□□ -0.98
MDC1-206ENST00000489540 ANAPC13Q9BS18 74 aa8.96□□□□□ -0.98
MDC1-206ENST00000489540 ATP5EP2Q5VTU8 51 aa8.95□□□□□ -0.98
MDC1-206ENST00000489540 Q8N9P0 234 aaPredicted RBP8.93□□□□□ -0.98
MDC1-206ENST00000489540 LINC00846Q9NV44 126 aa8.91□□□□□ -0.98
MDC1-206ENST00000489540 BPY2O14599 106 aa8.9□□□□□ -0.98
MDC1-206ENST00000489540 UBL5Q9BZL1 73 aa8.9□□□□□ -0.98
MDC1-206ENST00000489540 Q6ZVQ6 151 aa8.89□□□□□ -0.99
MDC1-206ENST00000489540 ZCCHC13Q8WW36 166 aaKnown RBP8.89□□□□□ -0.99
MDC1-206ENST00000489540 K7EQZ3 153 aa8.86□□□□□ -0.99
MDC1-206ENST00000489540 M0R2T5 61 aa8.86□□□□□ -0.99
MDC1-206ENST00000489540 MMP24-AS1A0A0U1RRL7 71 aa8.85□□□□□ -0.99
MDC1-206ENST00000489540 FAM236AA0A1B0GUQ0 79 aa8.84□□□□□ -0.99
MDC1-206ENST00000489540 FAM236BA0A1B0GV22 79 aa8.84□□□□□ -0.99
MDC1-206ENST00000489540 TMEM254Q8TBM7 123 aa8.84□□□□□ -0.99
MDC1-206ENST00000489540 MRPL34Q9BQ48 92 aaKnown RBP8.83□□□□□ -1
MDC1-206ENST00000489540 hDV103S1A0JD37 113 aa8.82□□□□□ -1
MDC1-206ENST00000489540 KRTAP9-2Q9BYQ4 174 aa8.81□□□□□ -1
MDC1-206ENST00000489540 ATOX1O00244 68 aa8.8□□□□□ -1
MDC1-206ENST00000489540 RBM12B-AS1Q9P1G2 102 aa8.8□□□□□ -1
MDC1-206ENST00000489540 FLGP20930 4061 aaPredicted RBP8.8□□□□□ -1
MDC1-206ENST00000489540 HRES1P13985 223 aa8.8□□□□□ -1
MDC1-206ENST00000489540 SPINK7P58062 85 aa8.79□□□□□ -1
MDC1-206ENST00000489540 HIST1H4AP62805 103 aaKnown RBP8.79□□□□□ -1
MDC1-206ENST00000489540 KRTAP10-6P60371 365 aaPredicted RBP8.78□□□□□ -1
MDC1-206ENST00000489540 MPLKIPQ8TAP9 179 aa8.78□□□□□ -1
MDC1-206ENST00000489540 CXCL6P80162 114 aa8.77□□□□□ -1.01
MDC1-206ENST00000489540 FAM236DA0A1B0GTK5 79 aa8.76□□□□□ -1.01
MDC1-206ENST00000489540 FAM236CP0DP71 79 aa8.76□□□□□ -1.01
MDC1-206ENST00000489540 LORP23490 312 aaPredicted RBP8.76□□□□□ -1.01
MDC1-206ENST00000489540 Q8N9L7 120 aa8.76□□□□□ -1.01
MDC1-206ENST00000489540 NDUFS5O43920 106 aa8.75□□□□□ -1.01
MDC1-206ENST00000489540 CASC2Q6XLA1 102 aa8.72□□□□□ -1.01
MDC1-206ENST00000489540 UQCRQO14949 82 aa8.71□□□□□ -1.01
MDC1-206ENST00000489540 LCE2DQ5TA82 110 aaPredicted RBP8.71□□□□□ -1.01
MDC1-206ENST00000489540 WFDC13Q8IUB5 93 aa8.71□□□□□ -1.01
MDC1-206ENST00000489540 CCDC179H3BU77 68 aa8.68□□□□□ -1.02
MDC1-206ENST00000489540 COX7CP15954 63 aa8.68□□□□□ -1.02
MDC1-206ENST00000489540 SMIM20Q8N5G0 67 aa8.67□□□□□ -1.02
MDC1-206ENST00000489540 A0A087WVE0 104 aa8.66□□□□□ -1.02
MDC1-206ENST00000489540 SERP2Q8N6R1 65 aa8.66□□□□□ -1.02
MDC1-206ENST00000489540 HCG22E2RYF7 251 aa8.65□□□□□ -1.02
MDC1-206ENST00000489540 Q5W150 140 aa8.62□□□□□ -1.03
MDC1-206ENST00000489540 IGKV2D-30A0A075B6S6 120 aa8.56□□□□□ -1.04
MDC1-206ENST00000489540 IGKV2-30P06310 120 aa8.56□□□□□ -1.04
MDC1-206ENST00000489540 C7orf65Q6ZTY9 151 aa8.56□□□□□ -1.04
MDC1-206ENST00000489540 TRAV7A0A075B6U4 112 aa8.55□□□□□ -1.04
MDC1-206ENST00000489540 KRTAP9-8Q9BYQ0 159 aa8.53□□□□□ -1.04
MDC1-206ENST00000489540 TP53AIP1Q9HCN2 124 aa8.53□□□□□ -1.04
MDC1-206ENST00000489540 C5orf47Q569G3 176 aa8.48□□□□□ -1.05
MDC1-206ENST00000489540 KRTAP9-6A0A140TA67 174 aa8.47□□□□□ -1.05
MDC1-206ENST00000489540 TMEM258P61165 79 aa8.46□□□□□ -1.05
MDC1-206ENST00000489540 H1FX-AS1Q4G0G2 97 aa8.46□□□□□ -1.05
MDC1-206ENST00000489540 NDUFC1O43677 76 aa8.42□□□□□ -1.06
MDC1-206ENST00000489540 MT2AP02795 61 aa8.41□□□□□ -1.06
MDC1-206ENST00000489540 KLKP1Q107X0 134 aa8.41□□□□□ -1.06
MDC1-206ENST00000489540 C20orf197Q8N268 126 aa8.41□□□□□ -1.06
MDC1-206ENST00000489540 C4orf26Q17RF5 130 aa8.39□□□□□ -1.07
MDC1-206ENST00000489540 FSIP2Q5CZC0 6907 aa8.39□□□□□ -1.07
MDC1-206ENST00000489540 CRCT1Q9UGL9 99 aa8.38□□□□□ -1.07
MDC1-206ENST00000489540 OCR1Q9BZK8 76 aa8.37□□□□□ -1.07
MDC1-206ENST00000489540 KRTAP10-10P60014 251 aa8.35□□□□□ -1.07
MDC1-206ENST00000489540 MT1FP04733 61 aa8.34□□□□□ -1.07
MDC1-206ENST00000489540 RPS28P62857 69 aaKnown RBP8.33□□□□□ -1.08
MDC1-206ENST00000489540 TRAV22A0A0B4J277 110 aa8.32□□□□□ -1.08
MDC1-206ENST00000489540 ATP5EP56381 51 aaPredicted RBP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 562.3 ms