RNA–Protein interactions for RNA: ENST00000489030.1

USP11-210, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 2

Gene USP11, Length 340 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-210ENST00000489030 SEC61BP60468 96 aaKnown RBP6.32□□□□□ -1.4
USP11-210ENST00000489030 C1orf195Q5TG92 126 aa6.32□□□□□ -1.4
USP11-210ENST00000489030 NREPQ16612 68 aa6.31□□□□□ -1.4
USP11-210ENST00000489030 ACYP1P07311 99 aa6.29□□□□□ -1.4
USP11-210ENST00000489030 XP32Q5T750 250 aa6.29□□□□□ -1.4
USP11-210ENST00000489030 Q96NJ1 140 aa6.28□□□□□ -1.4
USP11-210ENST00000489030 LINC00472Q9H8W2 130 aa6.28□□□□□ -1.4
USP11-210ENST00000489030 J3KT08 172 aa6.27□□□□□ -1.41
USP11-210ENST00000489030 J3QR89 54 aa6.27□□□□□ -1.41
USP11-210ENST00000489030 LORP23490 312 aaPredicted RBP6.27□□□□□ -1.41
USP11-210ENST00000489030 UBL5Q9BZL1 73 aa6.27□□□□□ -1.41
USP11-210ENST00000489030 IGKV4-1P06312 121 aa6.26□□□□□ -1.41
USP11-210ENST00000489030 LINC00846Q9NV44 126 aa6.26□□□□□ -1.41
USP11-210ENST00000489030 FAM240AA0A1B0GVK7 77 aa6.25□□□□□ -1.41
USP11-210ENST00000489030 KRTAP10-6P60371 365 aaPredicted RBP6.25□□□□□ -1.41
USP11-210ENST00000489030 DEFB116Q30KQ4 102 aa6.25□□□□□ -1.41
USP11-210ENST00000489030 Q6ZVQ6 151 aa6.24□□□□□ -1.41
USP11-210ENST00000489030 SIGMAR1Q99720 223 aa6.23□□□□□ -1.41
USP11-210ENST00000489030 BPY2O14599 106 aa6.22□□□□□ -1.41
USP11-210ENST00000489030 NDUFB1O75438 58 aa6.22□□□□□ -1.41
USP11-210ENST00000489030 PCOTHQ58A44 107 aa6.22□□□□□ -1.41
USP11-210ENST00000489030 K7ERU9 68 aa6.19□□□□□ -1.42
USP11-210ENST00000489030 A8MWP4 228 aa6.18□□□□□ -1.42
USP11-210ENST00000489030 A0A1B0GVX0 72 aa6.17□□□□□ -1.42
USP11-210ENST00000489030 IGHV6-1A0A0B4J1U7 121 aa6.16□□□□□ -1.42
USP11-210ENST00000489030 C9orf92A6NGG3 77 aa6.16□□□□□ -1.42
USP11-210ENST00000489030 C8orf87E5RJ46 101 aa6.16□□□□□ -1.42
USP11-210ENST00000489030 DSCR10P59022 87 aa6.16□□□□□ -1.42
USP11-210ENST00000489030 LINC00313P59037 77 aa6.16□□□□□ -1.42
USP11-210ENST00000489030 CXCL6P80162 114 aa6.16□□□□□ -1.42
USP11-210ENST00000489030 PRR15Q8IV56 129 aa6.15□□□□□ -1.42
USP11-210ENST00000489030 IGKV3D-7A0A0C4DH55 119 aa6.14□□□□□ -1.43
USP11-210ENST00000489030 LINC00643Q86TS7 51 aa6.14□□□□□ -1.43
USP11-210ENST00000489030 FLGP20930 4061 aaPredicted RBP6.12□□□□□ -1.43
USP11-210ENST00000489030 KRTAP9-7A8MTY7 169 aa6.12□□□□□ -1.43
USP11-210ENST00000489030 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.12□□□□□ -1.43
USP11-210ENST00000489030 K7EQZ3 153 aa6.12□□□□□ -1.43
USP11-210ENST00000489030 ATP5EP2Q5VTU8 51 aa6.12□□□□□ -1.43
USP11-210ENST00000489030 C8orf17Q9NRJ1 99 aa6.11□□□□□ -1.43
USP11-210ENST00000489030 M0R2T5 61 aa6.09□□□□□ -1.43
USP11-210ENST00000489030 NOTCH2NLQ7Z3S9 236 aa6.09□□□□□ -1.43
USP11-210ENST00000489030 SSPOA2VEC9 5147 aa6.08□□□□□ -1.44
USP11-210ENST00000489030 Q8N9L7 120 aa6.08□□□□□ -1.44
USP11-210ENST00000489030 MMP24-AS1A0A0U1RRL7 71 aa6.06□□□□□ -1.44
USP11-210ENST00000489030 hDV103S1A0JD37 113 aa6.06□□□□□ -1.44
USP11-210ENST00000489030 KRTAP16-1A8MUX0 517 aa6.05□□□□□ -1.44
USP11-210ENST00000489030 HIST1H4AP62805 103 aaKnown RBP6.05□□□□□ -1.44
USP11-210ENST00000489030 TMEM254Q8TBM7 123 aa6.05□□□□□ -1.44
USP11-210ENST00000489030 C20orf166-AS1Q96NR2 134 aa6.05□□□□□ -1.44
USP11-210ENST00000489030 A8MUU9 505 aa6.04□□□□□ -1.44
USP11-210ENST00000489030 CASC2Q6XLA1 102 aa6.04□□□□□ -1.44
USP11-210ENST00000489030 Q75L30 129 aa6.04□□□□□ -1.44
USP11-210ENST00000489030 MRPL34Q9BQ48 92 aaKnown RBP6.04□□□□□ -1.44
USP11-210ENST00000489030 USH2AO75445 5202 aa6.04□□□□□ -1.44
USP11-210ENST00000489030 HCG22E2RYF7 251 aa6.03□□□□□ -1.44
USP11-210ENST00000489030 RPL37P61927 97 aaKnown RBP6.03□□□□□ -1.44
USP11-210ENST00000489030 COX6B2Q6YFQ2 88 aa6.03□□□□□ -1.44
USP11-210ENST00000489030 WFDC13Q8IUB5 93 aa6.02□□□□□ -1.45
USP11-210ENST00000489030 ATP11AUNQ6ZP68 121 aa6.01□□□□□ -1.45
USP11-210ENST00000489030 Q8N9P0 234 aaPredicted RBP6.01□□□□□ -1.45
USP11-210ENST00000489030 IMUPQ9GZP8 106 aa6□□□□□ -1.45
USP11-210ENST00000489030 NDUFS5O43920 106 aa5.99□□□□□ -1.45
USP11-210ENST00000489030 MT-ATP8P03928 68 aa5.97□□□□□ -1.45
USP11-210ENST00000489030 A0A087WVE0 104 aa5.96□□□□□ -1.46
USP11-210ENST00000489030 FCGBPQ9Y6R7 5405 aaPredicted RBP5.95□□□□□ -1.46
USP11-210ENST00000489030 KRTAP9-8Q9BYQ0 159 aa5.95□□□□□ -1.46
USP11-210ENST00000489030 TP53AIP1Q9HCN2 124 aa5.94□□□□□ -1.46
USP11-210ENST00000489030 ZCCHC13Q8WW36 166 aaKnown RBP5.93□□□□□ -1.46
USP11-210ENST00000489030 SCGB1A1P11684 91 aa5.89□□□□□ -1.47
USP11-210ENST00000489030 KRTAP19-1Q8IUB9 90 aa5.87□□□□□ -1.47
USP11-210ENST00000489030 LCE2BO14633 110 aa5.86□□□□□ -1.47
USP11-210ENST00000489030 UQCRQO14949 82 aa5.86□□□□□ -1.47
USP11-210ENST00000489030 Q5W150 140 aa5.85□□□□□ -1.47
USP11-210ENST00000489030 FAM236AA0A1B0GUQ0 79 aa5.84□□□□□ -1.47
USP11-210ENST00000489030 FAM236BA0A1B0GV22 79 aa5.84□□□□□ -1.47
USP11-210ENST00000489030 MT2AP02795 61 aa5.84□□□□□ -1.47
USP11-210ENST00000489030 SMIM20Q8N5G0 67 aa5.83□□□□□ -1.48
USP11-210ENST00000489030 SYNE2Q8WXH0 6885 aaKnown RBP5.83□□□□□ -1.48
USP11-210ENST00000489030 TRAV22A0A0B4J277 110 aa5.82□□□□□ -1.48
USP11-210ENST00000489030 OCR1Q9BZK8 76 aa5.82□□□□□ -1.48
USP11-210ENST00000489030 MACF1Q9UPN3 7388 aaKnown RBP5.82□□□□□ -1.48
USP11-210ENST00000489030 MT1FP04733 61 aa5.81□□□□□ -1.48
USP11-210ENST00000489030 SPINK7P58062 85 aa5.81□□□□□ -1.48
USP11-210ENST00000489030 ATOX1O00244 68 aa5.8□□□□□ -1.48
USP11-210ENST00000489030 C5orf47Q569G3 176 aa5.79□□□□□ -1.48
USP11-210ENST00000489030 IGKV2D-30A0A075B6S6 120 aa5.78□□□□□ -1.48
USP11-210ENST00000489030 H0Y9P7 68 aa5.78□□□□□ -1.48
USP11-210ENST00000489030 IGKV2-30P06310 120 aa5.78□□□□□ -1.48
USP11-210ENST00000489030 C7orf65Q6ZTY9 151 aa5.78□□□□□ -1.48
USP11-210ENST00000489030 KRTAP9-3Q9BYQ3 159 aa5.78□□□□□ -1.48
USP11-210ENST00000489030 TRAV7A0A075B6U4 112 aa5.77□□□□□ -1.49
USP11-210ENST00000489030 MP68P56378 58 aa5.77□□□□□ -1.49
USP11-210ENST00000489030 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
USP11-210ENST00000489030 H3BPC8 53 aa5.74□□□□□ -1.49
USP11-210ENST00000489030 HRES1P13985 223 aa5.73□□□□□ -1.49
USP11-210ENST00000489030 C1orf64Q8NEQ6 169 aa5.73□□□□□ -1.49
USP11-210ENST00000489030 LINC00208Q96KT6 92 aa5.73□□□□□ -1.49
USP11-210ENST00000489030 RBM12B-AS1Q9P1G2 102 aa5.73□□□□□ -1.49
USP11-210ENST00000489030 CYP4F30PQ9H0H9 118 aa5.72□□□□□ -1.49
USP11-210ENST00000489030 SERP2Q8N6R1 65 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms