RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 CCDC168Q8NDH2 2452 aa1.22□□□□□ -2.21
SSR1-209ENST00000488834 SPINK1P00995 79 aa1.22□□□□□ -2.21
SSR1-209ENST00000488834 FAM208BQ5VWN6 2430 aa1.22□□□□□ -2.21
SSR1-209ENST00000488834 CELSR2Q9HCU4 2923 aa1.22□□□□□ -2.21
SSR1-209ENST00000488834 CFAP54Q96N23 3096 aa1.21□□□□□ -2.22
SSR1-209ENST00000488834 H3BNG1 76 aa1.21□□□□□ -2.22
SSR1-209ENST00000488834 PCNTO95613 3336 aa1.21□□□□□ -2.22
SSR1-209ENST00000488834 F8P00451 2351 aa1.21□□□□□ -2.22
SSR1-209ENST00000488834 TENM1Q9UKZ4 2725 aa1.21□□□□□ -2.22
SSR1-209ENST00000488834 SPTAN1Q13813 2472 aaKnown RBP1.21□□□□□ -2.22
SSR1-209ENST00000488834 COL6A5A8TX70 2615 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 KALRNO60229 2985 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 CENPFP49454 3210 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 S4R3F8 94 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 SETD2Q9BYW2 2564 aaPredicted RBP1.2□□□□□ -2.22
SSR1-209ENST00000488834 CHD9Q3L8U1 2897 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 FRYLO94915 3013 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 APCP25054 2843 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 CFAP47Q6ZTR5 3102 aa1.2□□□□□ -2.22
SSR1-209ENST00000488834 RIF1Q5UIP0 2472 aaKnown RBP1.2□□□□□ -2.22
SSR1-209ENST00000488834 MUC2Q02817 5179 aa1.19□□□□□ -2.22
SSR1-209ENST00000488834 LINC01556Q5JQF7 62 aa1.19□□□□□ -2.22
SSR1-209ENST00000488834 UBE2DNLQ8IWF7 75 aa1.19□□□□□ -2.22
SSR1-209ENST00000488834 LRBAP50851 2863 aa1.19□□□□□ -2.22
SSR1-209ENST00000488834 GOLGB1Q14789 3259 aaKnown RBP1.19□□□□□ -2.22
SSR1-209ENST00000488834 ANKHD1Q8IWZ3 2542 aaKnown RBP1.19□□□□□ -2.22
SSR1-209ENST00000488834 DOPEY1Q5JWR5 2465 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 MYO18BQ8IUG5 2567 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 HIVEP3Q5T1R4 2406 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 SRRM2Q9UQ35 2752 aaKnown RBP1.18□□□□□ -2.22
SSR1-209ENST00000488834 FLNBO75369 2602 aaKnown RBP1.18□□□□□ -2.22
SSR1-209ENST00000488834 FRYQ5TBA9 3013 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 A0A096LNI7 61 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 PRRC2CQ9Y520 2896 aaKnown RBP1.18□□□□□ -2.22
SSR1-209ENST00000488834 EPG5Q9HCE0 2579 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 PIEZO1Q92508 2521 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 HECTD1Q9ULT8 2610 aa1.18□□□□□ -2.22
SSR1-209ENST00000488834 TRIOO75962 3097 aa1.17□□□□□ -2.22
SSR1-209ENST00000488834 SONP18583 2426 aaKnown RBP1.17□□□□□ -2.22
SSR1-209ENST00000488834 FASNP49327 2511 aaKnown RBP1.17□□□□□ -2.22
SSR1-209ENST00000488834 SPART-AS1P0CW21 52 aa1.17□□□□□ -2.22
SSR1-209ENST00000488834 APLNQ9ULZ1 77 aa1.17□□□□□ -2.22
SSR1-209ENST00000488834 VWFP04275 2813 aa1.17□□□□□ -2.22
SSR1-209ENST00000488834 ITPR3Q14573 2671 aa1.17□□□□□ -2.22
SSR1-209ENST00000488834 DNAH12Q6ZR08 3092 aa1.17□□□□□ -2.22
SSR1-209ENST00000488834 MKI67P46013 3256 aaKnown RBP1.16□□□□□ -2.22
SSR1-209ENST00000488834 TLN1Q9Y490 2541 aaKnown RBP1.16□□□□□ -2.22
SSR1-209ENST00000488834 HELZ2Q9BYK8 2649 aaKnown RBP1.16□□□□□ -2.22
SSR1-209ENST00000488834 SPINK6Q6UWN8 80 aa1.16□□□□□ -2.22
SSR1-209ENST00000488834 DEFB124Q8NES8 71 aa1.16□□□□□ -2.22
SSR1-209ENST00000488834 CEP290O15078 2479 aa1.16□□□□□ -2.22
SSR1-209ENST00000488834 STAB1Q9NY15 2570 aa1.16□□□□□ -2.22
SSR1-209ENST00000488834 RANBP2P49792 3224 aaKnown RBP1.16□□□□□ -2.22
SSR1-209ENST00000488834 VPS13AQ96RL7 3174 aa1.16□□□□□ -2.22
SSR1-209ENST00000488834 JMJD1CQ15652 2540 aa1.16□□□□□ -2.22
SSR1-209ENST00000488834 RYR1P21817 5038 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 BDP1A6H8Y1 2624 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 UTRNP46939 3433 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 A0A0D9SG42 100 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 TTC28Q96AY4 2481 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 ANKRD11Q6UB99 2663 aaPredicted RBP1.15□□□□□ -2.23
SSR1-209ENST00000488834 TEX15Q9BXT5 2789 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 VPS13DQ5THJ4 4388 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 TACC2O95359 2948 aa1.15□□□□□ -2.23
SSR1-209ENST00000488834 ABCA12Q86UK0 2595 aa1.14□□□□□ -2.23
SSR1-209ENST00000488834 BOD1L1Q8NFC6 3051 aa1.14□□□□□ -2.23
SSR1-209ENST00000488834 MEGF8Q7Z7M0 2845 aa1.14□□□□□ -2.23
SSR1-209ENST00000488834 TLN2Q9Y4G6 2542 aa1.14□□□□□ -2.23
SSR1-209ENST00000488834 DMBT1Q9UGM3 2413 aaPredicted RBP1.14□□□□□ -2.23
SSR1-209ENST00000488834 UTP20O75691 2785 aaKnown RBP1.13□□□□□ -2.23
SSR1-209ENST00000488834 HTN3P15516 51 aa1.13□□□□□ -2.23
SSR1-209ENST00000488834 SZT2Q5T011 3432 aa1.12□□□□□ -2.23
SSR1-209ENST00000488834 LAMA2P24043 3122 aaKnown RBP1.12□□□□□ -2.23
SSR1-209ENST00000488834 HTTP42858 3142 aa1.12□□□□□ -2.23
SSR1-209ENST00000488834 M0QZ58 72 aa1.12□□□□□ -2.23
SSR1-209ENST00000488834 DEFB4AO15263 64 aa1.12□□□□□ -2.23
SSR1-209ENST00000488834 NF1P21359 2839 aa1.12□□□□□ -2.23
SSR1-209ENST00000488834 DMXL1Q9Y485 3027 aa1.12□□□□□ -2.23
SSR1-209ENST00000488834 NOTCH1P46531 2555 aa1.11□□□□□ -2.23
SSR1-209ENST00000488834 UNC80Q8N2C7 3258 aa1.11□□□□□ -2.23
SSR1-209ENST00000488834 ZFYVE26Q68DK2 2539 aa1.11□□□□□ -2.23
SSR1-209ENST00000488834 WDFY4Q6ZS81 3184 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 C5orf42Q9H799 3197 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 SPTBN5Q9NRC6 3674 aaKnown RBP1.1□□□□□ -2.23
SSR1-209ENST00000488834 LAMA1P25391 3075 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 CRYBG3Q68DQ2 2970 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 BIRC6Q9NR09 4857 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 EP400Q96L91 3159 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 DEFB135Q30KP9 77 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 Q5VSD8 79 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 CENPEQ02224 2701 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 RYR3Q15413 4870 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 REV3LO60673 3130 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 LRRK2Q5S007 2527 aa1.1□□□□□ -2.23
SSR1-209ENST00000488834 DMXL2Q8TDJ6 3036 aa1.09□□□□□ -2.23
SSR1-209ENST00000488834 MTORP42345 2549 aa1.09□□□□□ -2.23
SSR1-209ENST00000488834 DNHD1Q96M86 4753 aa1.09□□□□□ -2.24
SSR1-209ENST00000488834 DMDP11532 3685 aa1.09□□□□□ -2.24
SSR1-209ENST00000488834 CELSR1Q9NYQ6 3014 aa1.08□□□□□ -2.24
SSR1-209ENST00000488834 COL12A1Q99715 3063 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms