RNA–Protein interactions for RNA: ENST00000488023.1

HFM1-208, Transcript of HFM1, ATP dependent DNA helicase homolog, humanhuman

TSL 5

Gene HFM1, Length 1,699 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1-208ENST00000488023 U3KQA8 63 aa1.07□□□□□ -2.24
HFM1-208ENST00000488023 USF3Q68DE3 2245 aa1.06□□□□□ -2.24
HFM1-208ENST00000488023 A0A1B0GU69 56 aa1.05□□□□□ -2.24
HFM1-208ENST00000488023 CEBPZOSA8MTT3 80 aa1.05□□□□□ -2.24
HFM1-208ENST00000488023 HERC1Q15751 4861 aa1.05□□□□□ -2.24
HFM1-208ENST00000488023 SPTY2D1-AS1A0A0U1RR47 76 aa1.04□□□□□ -2.24
HFM1-208ENST00000488023 LINC00959A0A1B0GUT2 108 aa1.04□□□□□ -2.24
HFM1-208ENST00000488023 FSIP2Q5CZC0 6907 aa1.04□□□□□ -2.24
HFM1-208ENST00000488023 DMBT1Q9UGM3 2413 aaPredicted RBP1.03□□□□□ -2.24
HFM1-208ENST00000488023 ZNF469Q96JG9 3925 aaPredicted RBP1.03□□□□□ -2.24
HFM1-208ENST00000488023 C18orf32Q8TCD1 76 aa1.03□□□□□ -2.24
HFM1-208ENST00000488023 SVEP1Q4LDE5 3571 aa1.03□□□□□ -2.25
HFM1-208ENST00000488023 S100A3P33764 101 aa1.02□□□□□ -2.25
HFM1-208ENST00000488023 MUC5ACP98088 5654 aa1.02□□□□□ -2.25
HFM1-208ENST00000488023 PRKDCP78527 4128 aaKnown RBP1.02□□□□□ -2.25
HFM1-208ENST00000488023 STAB2Q8WWQ8 2551 aa1.02□□□□□ -2.25
HFM1-208ENST00000488023 RNF213Q63HN8 5207 aa1.02□□□□□ -2.25
HFM1-208ENST00000488023 FAT4Q6V0I7 4981 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 CFDP00746 253 aaPredicted RBP1.01□□□□□ -2.25
HFM1-208ENST00000488023 DEFA5Q01523 94 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 LELP1Q5T871 98 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 SMCO4Q9NRQ5 59 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 TRRAPQ9Y4A5 3859 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 DNAH1Q9P2D7 4330 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 WNK2Q9Y3S1 2297 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 NEBP20929 6669 aa1.01□□□□□ -2.25
HFM1-208ENST00000488023 A0A1B0GUT8 65 aa1□□□□□ -2.25
HFM1-208ENST00000488023 HMGA1P17096 107 aaKnown RBP1□□□□□ -2.25
HFM1-208ENST00000488023 Q5VSD8 79 aa1□□□□□ -2.25
HFM1-208ENST00000488023 DEFB104AQ8WTQ1 72 aa1□□□□□ -2.25
HFM1-208ENST00000488023 TP53AIP1Q9HCN2 124 aa1□□□□□ -2.25
HFM1-208ENST00000488023 PLCE1Q9P212 2302 aa0.99□□□□□ -2.25
HFM1-208ENST00000488023 DYNC2H1Q8NCM8 4307 aaKnown RBP0.99□□□□□ -2.25
HFM1-208ENST00000488023 TRBV7-4A0A0J9YYF1 115 aa0.99□□□□□ -2.25
HFM1-208ENST00000488023 I3L2K1 104 aa0.99□□□□□ -2.25
HFM1-208ENST00000488023 COX6A2Q02221 97 aa0.99□□□□□ -2.25
HFM1-208ENST00000488023 DEFB112Q30KQ8 113 aa0.99□□□□□ -2.25
HFM1-208ENST00000488023 COL7A1Q02388 2944 aa0.99□□□□□ -2.25
HFM1-208ENST00000488023 A0A0D9SFI3 127 aa0.98□□□□□ -2.25
HFM1-208ENST00000488023 TACC2O95359 2948 aa0.98□□□□□ -2.25
HFM1-208ENST00000488023 SMIM13P0DJ93 91 aa0.97□□□□□ -2.25
HFM1-208ENST00000488023 PRO0255Q9UI72 69 aa0.97□□□□□ -2.25
HFM1-208ENST00000488023 SYNE2Q8WXH0 6885 aaKnown RBP0.97□□□□□ -2.25
HFM1-208ENST00000488023 DEFB108AA8MXU0 73 aa0.97□□□□□ -2.25
HFM1-208ENST00000488023 PDCD5O14737 125 aa0.97□□□□□ -2.25
HFM1-208ENST00000488023 CNFNQ9BYD5 112 aa0.97□□□□□ -2.25
HFM1-208ENST00000488023 HECTD4Q9Y4D8 3996 aa0.96□□□□□ -2.26
HFM1-208ENST00000488023 PRB3Q04118 309 aaPredicted RBP0.96□□□□□ -2.26
HFM1-208ENST00000488023 Q5BKY6 102 aa0.96□□□□□ -2.26
HFM1-208ENST00000488023 WFDC9Q8NEX5 89 aa0.96□□□□□ -2.26
HFM1-208ENST00000488023 SSPOA2VEC9 5147 aa0.96□□□□□ -2.26
HFM1-208ENST00000488023 TRAV21A0A0B4J279 112 aa0.95□□□□□ -2.26
HFM1-208ENST00000488023 KRTAP2-3P0C7H8 128 aa0.95□□□□□ -2.26
HFM1-208ENST00000488023 KRTAP2-4Q9BYR9 128 aa0.95□□□□□ -2.26
HFM1-208ENST00000488023 CRIPTQ9P021 101 aa0.95□□□□□ -2.26
HFM1-208ENST00000488023 ANKRD36A6QL64 1941 aa0.95□□□□□ -2.26
HFM1-208ENST00000488023 A0A087WXM4 84 aa0.94□□□□□ -2.26
HFM1-208ENST00000488023 FXYD6-FXYD2A0A087WZ82 144 aa0.94□□□□□ -2.26
HFM1-208ENST00000488023 PIGYQ3MUY2 71 aa0.94□□□□□ -2.26
HFM1-208ENST00000488023 GAFA1Q96PS6 74 aa0.94□□□□□ -2.26
HFM1-208ENST00000488023 CMYA5Q8N3K9 4069 aa0.94□□□□□ -2.26
HFM1-208ENST00000488023 MACF1Q9UPN3 7388 aaKnown RBP0.94□□□□□ -2.26
HFM1-208ENST00000488023 SACSQ9NZJ4 4579 aa0.93□□□□□ -2.26
HFM1-208ENST00000488023 IFI6P09912 130 aa0.93□□□□□ -2.26
HFM1-208ENST00000488023 HMCN2Q8NDA2 5059 aa0.93□□□□□ -2.26
HFM1-208ENST00000488023 ATP5EP2Q5VTU8 51 aa0.92□□□□□ -2.26
HFM1-208ENST00000488023 Q8IZM0 81 aa0.92□□□□□ -2.26
HFM1-208ENST00000488023 ANK3Q12955 4377 aaKnown RBP0.92□□□□□ -2.26
HFM1-208ENST00000488023 LYNX1G3V0Z9 82 aa0.91□□□□□ -2.26
HFM1-208ENST00000488023 K7EQZ3 153 aa0.91□□□□□ -2.26
HFM1-208ENST00000488023 IFI27P40305 119 aaPredicted RBP0.91□□□□□ -2.26
HFM1-208ENST00000488023 LYSTQ99698 3801 aa0.91□□□□□ -2.26
HFM1-208ENST00000488023 UMAD1C9J7I0 102 aa0.91□□□□□ -2.26
HFM1-208ENST00000488023 SMR3BP02814 79 aaPredicted RBP0.91□□□□□ -2.26
HFM1-208ENST00000488023 COX7BP24311 80 aa0.91□□□□□ -2.26
HFM1-208ENST00000488023 HEPN1Q6WQI6 88 aa0.91□□□□□ -2.26
HFM1-208ENST00000488023 KRTAP2-1Q9BYU5 128 aa0.91□□□□□ -2.26
HFM1-208ENST00000488023 KMT2AQ03164 3969 aa0.89□□□□□ -2.27
HFM1-208ENST00000488023 NDUFB1O75438 58 aa0.89□□□□□ -2.27
HFM1-208ENST00000488023 H3BVH4 76 aa0.88□□□□□ -2.27
HFM1-208ENST00000488023 ALMS1Q8TCU4 4167 aa0.88□□□□□ -2.27
HFM1-208ENST00000488023 SMIM31A0A1B0GVY4 71 aa0.88□□□□□ -2.27
HFM1-208ENST00000488023 HILPDAQ9Y5L2 63 aa0.88□□□□□ -2.27
HFM1-208ENST00000488023 PKHD1P08F94 4074 aa0.87□□□□□ -2.27
HFM1-208ENST00000488023 NREPQ16612 68 aa0.87□□□□□ -2.27
HFM1-208ENST00000488023 FRAS1Q86XX4 4008 aa0.87□□□□□ -2.27
HFM1-208ENST00000488023 USMG5Q96IX5 58 aa0.85□□□□□ -2.27
HFM1-208ENST00000488023 SRRM2Q9UQ35 2752 aaKnown RBP0.85□□□□□ -2.27
HFM1-208ENST00000488023 I3L3M4 83 aa0.84□□□□□ -2.27
HFM1-208ENST00000488023 M0R2T5 61 aa0.84□□□□□ -2.27
HFM1-208ENST00000488023 HSPG2P98160 4391 aa0.84□□□□□ -2.27
HFM1-208ENST00000488023 H3BSH0 61 aa0.84□□□□□ -2.28
HFM1-208ENST00000488023 DEFB108BQ8NET1 73 aa0.84□□□□□ -2.28
HFM1-208ENST00000488023 USH2AO75445 5202 aa0.84□□□□□ -2.28
HFM1-208ENST00000488023 CSMD3Q7Z407 3707 aa0.83□□□□□ -2.28
HFM1-208ENST00000488023 CPSF4LA6NMK7 179 aaKnown RBP0.83□□□□□ -2.28
HFM1-208ENST00000488023 DEFB110Q30KQ9 67 aa0.83□□□□□ -2.28
HFM1-208ENST00000488023 KRTAP19-3Q7Z4W3 81 aa0.83□□□□□ -2.28
HFM1-208ENST00000488023 COX14Q96I36 57 aa0.83□□□□□ -2.28
HFM1-208ENST00000488023 APLNQ9ULZ1 77 aa0.83□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms