RNA–Protein interactions for RNA: ENST00000487890.5

GPNMB-212, Transcript of glycoprotein nmb, humanhuman

TSL 5

Gene GPNMB, Length 577 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-212ENST00000487890 Q8NDZ9 215 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 SPTSSBQ8NFR3 76 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 SMCR5Q8TEV8 140 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 SMIM2Q9BVW6 85 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 CDC42SE2Q9NRR3 84 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 R4GN34 69 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 V9GYV3 84 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 TNXBP22105 4242 aa1.82□□□□□ -2.12
GPNMB-212ENST00000487890 SMIM27A0A1W2PRY6 76 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 hDV103S1A0JD37 113 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 SMIM13P0DJ93 91 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 POLR2KP53803 58 aaKnown RBP1.81□□□□□ -2.12
GPNMB-212ENST00000487890 Q1T7F1 81 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 SFTA2Q6UW10 78 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 IGFL1Q6UW32 110 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 UBE2D4Q9Y2X8 147 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 LRP2P98164 4655 aa1.81□□□□□ -2.12
GPNMB-212ENST00000487890 A0A1B0GU33 70 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 H7BZZ5 65 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 NDUFA1O15239 70 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 MT1HL1P0DM35 61 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 HRES1P13985 223 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 IFI27P40305 119 aaPredicted RBP1.8□□□□□ -2.12
GPNMB-212ENST00000487890 ROMO1P60602 79 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 C9orf116Q5BN46 136 aaPredicted RBP1.8□□□□□ -2.12
GPNMB-212ENST00000487890 C1orf137Q5JT78 98 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 TMEM141Q96I45 108 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 TIMM21Q9BVV7 248 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 MRPL35Q9NZE8 188 aaKnown RBP1.8□□□□□ -2.12
GPNMB-212ENST00000487890 TOMM7Q9P0U1 55 aa1.8□□□□□ -2.12
GPNMB-212ENST00000487890 A0A1W2PNN7 141 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 ASB16-AS1Q495Z4 193 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 SPINK6Q6UWN8 80 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 C2orf82Q6UX34 121 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 UNQ6190/PRO20217Q6UXQ8 127 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 Q6ZQT0 140 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 SMDT1Q9H4I9 107 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 NHP2Q9NX24 153 aaKnown RBP1.79□□□□□ -2.12
GPNMB-212ENST00000487890 PSORS1C2Q9UIG4 136 aa1.79□□□□□ -2.12
GPNMB-212ENST00000487890 HMCN2Q8NDA2 5059 aa1.78□□□□□ -2.12
GPNMB-212ENST00000487890 TRAV13-2A0A0B4J235 113 aa1.78□□□□□ -2.12
GPNMB-212ENST00000487890 HCG22E2RYF7 251 aa1.78□□□□□ -2.12
GPNMB-212ENST00000487890 C3orf79P0CE67 100 aa1.78□□□□□ -2.12
GPNMB-212ENST00000487890 LINC01600Q96MT4 127 aa1.78□□□□□ -2.12
GPNMB-212ENST00000487890 C6orf48Q9UBA6 75 aa1.78□□□□□ -2.12
GPNMB-212ENST00000487890 TRAV7A0A075B6U4 112 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 TRBV30A0A0K0K1B3 111 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 TEX49A0A1B0GTD5 131 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 C11orf86A6NJI1 115 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 NDUFC1O43677 76 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 UBE2D1P51668 147 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 CASC2Q6XLA1 102 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 LINC00643Q86TS7 51 aa1.77□□□□□ -2.13
GPNMB-212ENST00000487890 UBR4Q5T4S7 5183 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 TRBV10-3A0A0K0K1G6 114 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 TRBV10-2A0A0K0K1G8 114 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 H7C2G1 150 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 P0C880 135 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 COX8AP10176 69 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 TMEM170BQ5T4T1 132 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 CDKN2A-AS1Q9UH64 79 aa1.76□□□□□ -2.13
GPNMB-212ENST00000487890 TRAV22A0A0B4J277 110 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 SPRR5A0A1B0GTR4 108 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 IGIPA6NJ69 53 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 F8VRH5 84 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 F8WEM9 126 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 KRTAP10-8P60410 259 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 MIR22HGQ0VDD5 57 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 Q5VV11 94 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 Q8IZM0 81 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 C20orf197Q8N268 126 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 COX7B2Q8TF08 81 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 C20orf166-AS1Q96NR2 134 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 AMELXQ99217 191 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 CDC42SE1Q9NRR8 79 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 C22orf24Q9Y442 160 aa1.75□□□□□ -2.13
GPNMB-212ENST00000487890 KRTAP9-6A8MVA2 160 aa1.74□□□□□ -2.13
GPNMB-212ENST00000487890 K7EMI3 77 aa1.74□□□□□ -2.13
GPNMB-212ENST00000487890 ACYP1P07311 99 aa1.74□□□□□ -2.13
GPNMB-212ENST00000487890 FXYD2P54710 66 aa1.74□□□□□ -2.13
GPNMB-212ENST00000487890 KLKP1Q107X0 134 aa1.74□□□□□ -2.13
GPNMB-212ENST00000487890 BAGE3Q86Y29 109 aa1.74□□□□□ -2.13
GPNMB-212ENST00000487890 PRO1854Q9UHT4 67 aa1.74□□□□□ -2.13
GPNMB-212ENST00000487890 A0A1W2PNM2 257 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 LINC01549A6NIU2 74 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 H3BPC8 53 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 CHKB-CPT1BH3BT56 60 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 BCE1O60756 84 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 ZNF625Q96I27 306 aaPredicted RBP1.73□□□□□ -2.13
GPNMB-212ENST00000487890 HIGD2AQ9BW72 106 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 CYP4F30PQ9H0H9 118 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 C14orf132Q9NPU4 83 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 RNF213Q63HN8 5207 aa1.73□□□□□ -2.13
GPNMB-212ENST00000487890 LPAP08519 4548 aa1.72□□□□□ -2.13
GPNMB-212ENST00000487890 LINC00158P58513 81 aa1.72□□□□□ -2.13
GPNMB-212ENST00000487890 PRLHP81277 87 aa1.72□□□□□ -2.13
GPNMB-212ENST00000487890 IFI27L1Q96BM0 104 aa1.72□□□□□ -2.13
GPNMB-212ENST00000487890 MYMXA0A1B0GTQ4 84 aa1.71□□□□□ -2.14
GPNMB-212ENST00000487890 LINC01546A6NGU7 62 aa1.71□□□□□ -2.14
GPNMB-212ENST00000487890 NCR3O14931 201 aa1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms